EWM24226.1, cds6391 (CDS) Nannochloropsis gaditana

Overview
NameEWM24226.1
Unique Namecds6391
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:447828..448209 +
Alignment locationCM002468.1:448328..448641 +
Alignment locationCM002468.1:448787..449269 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24226.1
Productmethylenetetrahydrofolate reductase
Orig transcript idgnl|cribi|Naga_100020g75.5359.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:447828..448209 +
CM002468.1supercontigCM002468.1:448328..448641 +
CM002468.1supercontigCM002468.1:448787..449269 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006555methionine metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0004489methylenetetrahydrofolate reductase (NAD(P)H) activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR003171Mehydrof_redctse
IPR029041FAD-linked_oxidoreductase-like
IPR004621Fadh2_euk
Homology
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|585105617|gb|EWM24226.1| (methylenetetrahydrofolate reductase [Nannochloropsis gaditana])

HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
Query:    1 MSALATTKPVEAMEDDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNGSDKVKSKEKALSNHDHVGAVASS 392
            MSALATTKPVEAMEDDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNGSDKVKSKEKALSNHDHVGAVASS
Sbjct:    1 MSALATTKPVEAMEDDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNGSDKVKSKEKALSNHDHVGAVASS 392          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|299470248|emb|CBN79552.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 364.385 bits (934), Expect = 1.077e-120
Identity = 171/313 (54.63%), Postives = 218/313 (69.65%), Query Frame = 0
Query:   34 SFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVD-SLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGL 345
            S EFFPP+T  GV  L +RL  M    PLFVDFTWGAGGSTA+LTL+LT   ++  GL+ NMHLTCTNMP +K+  AL   K+ GI NI+ALRGDPP G + WE  EGGF+ ALDLV YIRK+H  +F + VAGYPEGHPNRI++V   +E LS+AE GR  + +  +G      VC D DF  E++Y+K KVDAGADF+ITQMFFD  VY +++K CR  GI VP++PG+MC N   GFK+M  FC TRVP +L   M  + K D+  V+ +G+D+G ++   LL AG+ GLHFY LNL +V +GI+  L L
Sbjct:   30 SLEFFPPRTDTGVMNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTTRTKKEHGLVPNMHLTCTNMPVDKIDHALAQCKEHGIRNIVALRGDPPTGSDTWEAAEGGFTCALDLVKYIRKNHGDYFGISVAGYPEGHPNRIKEVPGGVESLSEAEKGRCKISQDAEGKEV-VTVCSDADFEIEMNYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEM-KEDEKAVKAFGVDYGEKMCNALLAAGAPGLHFYTLNLEKVTVGILDRLNL 340          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|167523328|ref|XP_001746001.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163775802|gb|EDQ89425.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 350.132 bits (897), Expect = 4.880e-116
Identity = 172/335 (51.34%), Postives = 224/335 (66.87%), Query Frame = 0
Query:   17 RIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVD 351
            +I + L++       + SFEFFPP+T +GV  L  R+       PLF+D TWGAGGST++LTL+L     +  G  ANMHLTCTNMP+EK+  ALK A+DAGI NI+ALRGDPP G+E WE +EGG+S ALDLV +IRK H  FFS+ V+GYPEGHPN I +V     L+++E  RV     ED    G YVCRD DF +E++YLKAKVDAGAD +ITQM FDA VY AF+K C++ GI +P++PGIMC     GFKRM AFC++R P  L   + A    D + +R+  ++ G +L ++L  AG+ GLHFY LNL +V L I+  L L    V+
Sbjct:    5 KISDRLQELSAKGEKFVSFEFFPPRTDDGVTSLMSRIQRYNDQQPLFMDMTWGAGGSTSDLTLDLCTRMVKECGANANMHLTCTNMPSEKIDIALKGARDAGIRNIVALRGDPPAGEEAWEAVEGGYSCALDLVKHIRKEHGDFFSIAVSGYPEGHPNAITKVQDEAELTESERERVI--EMED----GLYVCRDGDFQKEMEYLKAKVDAGADLIITQMVFDAPVYGAFLKACKAYGINIPVVPGIMCIQNAGGFKRMTAFCKSRTPAALRAAVEAAG-DDKEAIRKVAVEHGAQLCRDLQAAGAPGLHFYTLNLEKVTLAILDALNLNKVPVE 332          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|397629815|gb|EJK69517.1| (hypothetical protein THAOC_09218 [Thalassiosira oceanica])

HSP 1 Score: 337.035 bits (863), Expect = 9.441e-110
Identity = 171/347 (49.28%), Postives = 225/347 (64.84%), Query Frame = 0
Query:   15 DDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAP-YNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNM-----PTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEG--LSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDAT 353
            D +I +LL ++  +     S E+FPP+T +GV+ L+ R+  M      L+ D TWGAGGSTAEL+L+L + A R  G ++N+HLTCTNM     P + V +AL++A D GI NI+ALRGDPP G + W   EGGF+ ALDLV YIRK     F + VAGYPEGHPNRI Q+   E   +S +E GR       DG     YVC+D+D+ +E+DYLK KVDAG DF+ITQMFFDAEV+  FVK CR  GI  P++PG+MC N   GFK+M  FC+TRVP+ L   M A+ K D D V+++G+ FG  + + LL +G   LHFY LNL +V  GI   LG+ S  V+ +
Sbjct:   10 DAKIIDLLSKKADNGIAHVSLEYFPPRTEQGVKNLHARMERMKTNTTALYTDMTWGAGGSTAELSLDLALHAHRT-GHVSNLHLTCTNMEKDGDPVKAVREALQAAYDGGIRNIVALRGDPPEGSDEWTAAEGGFACALDLVRYIRKEFGDSFGISVAGYPEGHPNRISQLTDEEAANMSDSEKGRCCTH---DGIT---YVCKDDDYKKEMDYLKEKVDAGGDFIITQMFFDAEVFKTFVKDCREWGINCPVVPGLMCINAYPGFKKMTKFCKTRVPKDLGEKMDAM-KDDPDAVKKFGVTFGSEICRSLLDSGVEILHFYTLNLEKVVYGITDDLGITSGLVEKS 348          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|1072234118|gb|OEU18848.1| (methylenetetrahydrofolate reduct [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 334.724 bits (857), Expect = 2.707e-109
Identity = 170/367 (46.32%), Postives = 233/367 (63.49%), Query Frame = 0
Query:   17 RIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMA-PYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNM-----PTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNGSDKVKSKE 377
            +I +L++ ++    P+ S EFFPP+T +GV+ LY R+  M    NPLF D TWGAGGSTAELTL++  E     G +ANMH+TCTN+     P   V  AL++AK  GI NI+ALRGDP  GQE W+  +GGF+ ALDLV Y+ ++  + F + VAGYPEGHPN I +V+    +S+AE  R ++E  +       Y CRD D+ +E+DYLK K+DAGADF+ITQMFFD +V+  FVK C++ GI  P++PG+MC N   GF +M  FC+TRVP +L   M ++ K D D V+ +GI+FG+++ Q+L   G   LHFY LNL +   GI+ GLG   +        ++V     K  NG   VKS E
Sbjct:    3 KIIDLIKAKEEGSKPFISIEFFPPRTADGVKNLYARMDRMKESINPLFSDVTWGAGGSTAELTLDIA-EQLSTTGHVANMHMTCTNLEKGGDPKAAVRGALETAKKNGINNIVALRGDPAAGQEEWKAADGGFTCALDLVEYMTENFGSEFGISVAGYPEGHPNAISEVEDPSSMSEAEKARSSMEGGK------VYTCRDADYKKEMDYLKKKIDAGADFIITQMFFDTKVFGTFVKDCKTWGINCPVVPGLMCINAYAGFVKMTGFCKTRVPAELRAKMDSI-KDDPDAVKAFGIEFGIQMCQDLTEIGVEVLHFYTLNLEKTTYGILKGLGYEVKGSAWARVGDQV-----KTANGVGVVKSIE 356          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|1129183307|gb|OLP90184.1| (Serine hydroxymethyltransferase 4 [Symbiodinium microadriaticum])

HSP 1 Score: 355.91 bits (912), Expect = 7.103e-107
Identity = 175/342 (51.17%), Postives = 229/342 (66.96%), Query Frame = 0
Query:   29 PTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVD-SLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNG 369
            P  WFSFE+FPPKTPEGVE L +R+ +M    PLF DFTWGAGGST+ELTL+LT  A+  FG +ANMHLTCTN  +E   +AL   K  G+ NI+ALRGDPP GQE+W   EGGFSSALDLV +IR++H  +FSV VAGYPEGHP+ I+ V+  +  L+ +E  R  V     G      VCRD +F +E+ YLK KVDAG+ FVITQMF DA+V++ FV  CR   I VPI+PGIMC N   G KRM   C+TR+PE L ++    + + D+  + +GI  GV + Q+LL  G+ GLHFY LNL +V +GI+ GLG  S +  A + + + +++   +  G
Sbjct:  561 PPGWFSFEYFPPKTPEGVENLRKRIVKMKSLGPLFTDFTWGAGGSTSELTLKLTSAAKNEFGTVANMHLTCTNQSSEMTGNALLECKQHGVRNIVALRGDPPRGQEKWTATEGGFSSALDLVKFIRQNHGDYFSVSVAGYPEGHPDNIEVVEGGVAALTASEKRRARVVTDAQGKEV-VTVCRDANFHKEMVYLKEKVDAGSHFVITQMFLDAQVFLDFVDECRKYDIKVPIVPGIMCLNGFGGLKRMTELCKTRLPEGL-LERAEKANTSDEAFKEFGIREGVAMCQKLLDGGAPGLHFYTLNLEKVVVGILKGLGKISDAQAAAFQSVEADAKFMVSAQG 900          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|1129190403|gb|OLP95633.1| (Serine hydroxymethyltransferase 4 [Symbiodinium microadriaticum])

HSP 1 Score: 349.362 bits (895), Expect = 1.204e-104
Identity = 185/367 (50.41%), Postives = 240/367 (65.40%), Query Frame = 0
Query:   14 EDDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVD-SLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEI-----DYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMC-----FNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGIVSGLGLGSQSVDATYTNEKVESEIEKAMNG 369
            +D +I EL+E+    P  WFSFE+FPPKT EGVE L +R+ +M    PLF DFTWGAGGST+ELTL+LT  A+  FG +ANMHLTCTN  +E   +ALK  K  G+ NI+ALRGDPP GQE+W   EGGFSSALDLV +IRKH   +FS+ VAGYPEGHP+ I+ V+  +  L+++E  R  V +   G  T   VCRD +F +E+      YLK KVDAGA FVITQMF DA+V++ FVK CR   I VPI+PGIMC      N L G KRM   C+TRVPE L M+    + + D+  + +GI  GV + + LL  G+ GLHFY LNL +V +GI+ GLG  S +  A +   + +++   +  G
Sbjct:  588 DDHKIDELVEKV---PAGWFSFEYFPPKTAEGVENLRKRIVKMKALGPLFTDFTWGAGGSTSELTLKLTSAAKNEFGTVANMHLTCTNQSSEMTENALKECKQLGVRNIVALRGDPPRGQEKWTATEGGFSSALDLVKFIRKHFGDYFSISVAGYPEGHPDNIETVEGGVAALTESEKRRARVVKDASGKET-VTVCRDANFHKEMVYLDRPYLKEKVDAGAGFVITQMFLDAQVFLEFVKECRKYDIKVPIVPGIMCTCLRGLNGLGGLKRMTELCKTRVPEGL-MERAEKANTSDEAFKEFGIQEGVAMCKALLEGGAPGLHFYTLNLEKVVVGILKGLGKISDAQAAAFQAVEADAKFMVSAQG 949          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|676381287|ref|XP_009033922.1| (hypothetical protein AURANDRAFT_20828 [Aureococcus anophagefferens] >gi|323455698|gb|EGB11566.1| hypothetical protein AURANDRAFT_20828 [Aureococcus anophagefferens])

HSP 1 Score: 320.087 bits (819), Expect = 3.203e-104
Identity = 156/324 (48.15%), Postives = 204/324 (62.96%), Query Frame = 0
Query:   17 RIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEM-APYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGSSGLHFYCLNLSRVALGI 339
            +I +L+ Q+      W S+E+FPP++ +GV+ L  R   M A   PLF D TWGAGGST++LT+ELT++  ++ GL  NMHLTCTN+    VV ALK+ +D G+ NI+ALRGDPPVGQ++WE  EGGF  ALDLV +IR+ H  +F + VAGYPEGHP+ I                          V   +VC D  F  E+DYLK KVDAGAD +ITQMFFDA  Y AF+K CR  GI VP++PGIM      GF++M   C+TRVPE +    +    SDD E++ YG+D GV +  +LL+ G+ GLHFY LNL +  L I
Sbjct:    3 KINDLIAQKAAKGEDWVSYEYFPPRSEQGVKNLEARFERMKAARMPLFCDMTWGAGGSTSDLTMELTLK-MKQLGLEPNMHLTCTNVAKADVVKALKTCRDNGVANIVALRGDPPVGQDKWEATEGGFECALDLVKFIRETHGDYFCLSVAGYPEGHPDTI--------------------------VHKVFVCPDASFKLEMDYLKKKVDAGADMIITQMFFDASTYGAFLKECRKCGIDVPVVPGIMLVQAAGGFRKMTTMCKTRVPEAV-AKAVDTRASDDAELKSYGVDLGVEMSHQLLKYGAPGLHFYTLNLEKSTLAI 298          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|551551411|ref|XP_005763162.1| (putative methylenetetrahydrofolate reductase [Emiliania huxleyi CCMP1516] >gi|485612418|gb|EOD10733.1| putative methylenetetrahydrofolate reductase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 313.923 bits (803), Expect = 1.587e-101
Identity = 159/317 (50.16%), Postives = 208/317 (65.62%), Query Frame = 0
Query:   31 PWFSFEFFPPKTPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHDTFFSVGVAGYPEGHPNRIQQVDSL-EGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDD-EVRRYGIDFGVRLGQELLRAG-SSGLHFYCLNLSRVALGIVSGLG 344
            P+ SFE+FPPKTPEGV KL++ + EM    PLFVDFTWGAGGS+A+LTLEL+  ++++  ++ NMHLTCTN   E     L  AK+AGI NI+ALRGDPP GQ++WE  EGGF+ ALDLV Y+R ++  +FS+ VAGYPEGHP+RI +V  +   LS  E  R+     E+      +VC D ++  E+DYLK K DAG D +ITQ+F+D EV+ A+V+  R AGIT PI PGIM  N   GFKRM  FC+TR+P  +   +  LS  D   E   YGID+   L ++L+ +    GLHFY LN S     I+  LG
Sbjct:   39 PFISFEYFPPKTPEGVVKLHKVIDEMCKQKPLFVDFTWGAGGSSADLTLELSKTSQQKHNVMVNMHLTCTNQSKEVCDAGLAGAKEAGICNIVALRGDPPKGQDKWEVTEGGFACALDLVKYMRTNYGDYFSIQVAGYPEGHPDRITKVSEMSRPLSDREKMRLVDVDGEE------FVCTDENYAIELDYLKQKCDAGGDVIITQLFYDFEVFKAWVQDLRDAGITAPIFPGIMPLNACGGFKRMTGFCKTRIPPAMAKRVAELSGDDKKAEFAEYGIDYLTDLCKQLVASKLVPGLHFYALNQSERTFQILKRLG 349          
BLAST of EWM24226.1 vs. NCBI_GenBank
Match: gi|219128204|ref|XP_002184308.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404109|gb|EEC44057.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 313.153 bits (801), Expect = 6.311e-101
Identity = 166/361 (45.98%), Postives = 219/361 (60.66%), Query Frame = 0
Query:   15 DDRIGELLEQRKGHPTPWFSFEFFPPKTPEGVEKLYERLAEMA-PYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNM---------------------------PTEKVVDALKSAKDAGITNILALRGDPPVGQERWEPIEGGFSSALDLVAYIRKHHD--TFFSVGVAGYPEGHPNRIQQVDSLEGLSKAELGRVAVERAEDGTVTGYYVCRDNDFVQEIDYLKAKVDAGADFVITQMFFDAEVYVAFVKTCRSAGITVPILPGIMCFNTLQGFKRMVAFCRTRVPEKLWMDMMALSKSDDDEVRRYGIDFGVRLGQELLRAGS-SGLHFYCLNLSRVALGIVSGLG 344
            D RIG+++ Q +    P+ S E+FPP+T EGV+ L+ R+  M     P F D TWGAGGSTAEL+L+L + A    G +AN+H+TCTN+                           P E +  AL+ A D GI N++ALRGDPP GQE W   EGGF+ ALDLV +IR   D    F + VAGYPEGHPN I ++     L+ AE  R +V    DG     Y C D D+ +E++YLK KVDAG D ++TQMFFDA V++ FV+ CR+ GITVPI+PG+MC N   GF +M  FC+TRVPE L   M A+ K D   V+ +G++FGV + + LL +G  S LHFY LNL +V  G++  LG
Sbjct:   24 DPRIGDVIAQPRPDGKPFVSLEYFPPRTAEGVQNLHARMHRMRDTLQPAFTDMTWGAGGSTAELSLQLALYAHNT-GHVANLHMTCTNLDSGKSSTSTSSSSEHNGNASDDVASADPRETLRRALQQAHDGGIRNLVALRGDPPAGQETWTATEGGFTCALDLVEFIRSLPDIGADFHLAVAGYPEGHPNAISEIADPTTLTAAEAARASVT---DGKT---YCCLDADYHKEMEYLKKKVDAGGDMIMTQMFFDAAVFLQFVEDCRAWGITVPIVPGLMCINAYAGFVKMAKFCKTRVPETLRARMEAI-KDDAAAVKAFGVEFGVEMCRTLLASGHVSVLHFYTLNLEKVVYGVLDALG 376          
The following BLAST results are available for this feature:
BLAST of EWM24226.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105617|gb|EWM24226.1|0.000e+0100.00methylenetetrahydrofolate reductase [Nannochlorops... [more]
gi|299470248|emb|CBN79552.1|1.077e-12054.63conserved unknown protein [Ectocarpus siliculosus][more]
gi|167523328|ref|XP_001746001.1|4.880e-11651.34hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|397629815|gb|EJK69517.1|9.441e-11049.28hypothetical protein THAOC_09218 [Thalassiosira oc... [more]
gi|1072234118|gb|OEU18848.1|2.707e-10946.32methylenetetrahydrofolate reduct [Fragilariopsis c... [more]
gi|1129183307|gb|OLP90184.1|7.103e-10751.17Serine hydroxymethyltransferase 4 [Symbiodinium mi... [more]
gi|1129190403|gb|OLP95633.1|1.204e-10450.41Serine hydroxymethyltransferase 4 [Symbiodinium mi... [more]
gi|676381287|ref|XP_009033922.1|3.203e-10448.15hypothetical protein AURANDRAFT_20828 [Aureococcus... [more]
gi|551551411|ref|XP_005763162.1|1.587e-10150.16putative methylenetetrahydrofolate reductase [Emil... [more]
gi|219128204|ref|XP_002184308.1|6.311e-10145.98predicted protein, partial [Phaeodactylum tricornu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6407rna6407Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications