EWM24241.1, cds6384 (CDS) Nannochloropsis gaditana

Overview
NameEWM24241.1
Unique Namecds6384
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:430080..431688 -

Link to JBrowse

Properties
Property NameValue
Start range430080
Start range.
Protein idEWM24241.1
Productatp-dependent dna helicase
Partialtrue
Orig transcript idgnl|cribi|Naga_100020g82.5374.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:430080..431688 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR027417P-loop_NTPase
Homology
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|585105632|gb|EWM24241.1| (atp-dependent dna helicase, partial [Nannochloropsis gaditana])

HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0
Identity = 536/536 (100.00%), Postives = 536/536 (100.00%), Query Frame = 0
Query:    1 MVVALRGGTLRPSCSSSCFFPARKRLLARVLLLFILAPFLQAHMPYGISVAAGSRWLSLGNAQLSVHSRNDLTTLILRSSGKGGYSRRAYHQVSGALCFISVRPRPASLPPSTPRRIKGCVSPIHVPGDMTAASPEASFSTASSQTRSTYPVPSPSRTSAHQHVDPPQQPRRRQRRPGLSLTSPPLSPSTPACRHAPAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            MVVALRGGTLRPSCSSSCFFPARKRLLARVLLLFILAPFLQAHMPYGISVAAGSRWLSLGNAQLSVHSRNDLTTLILRSSGKGGYSRRAYHQVSGALCFISVRPRPASLPPSTPRRIKGCVSPIHVPGDMTAASPEASFSTASSQTRSTYPVPSPSRTSAHQHVDPPQQPRRRQRRPGLSLTSPPLSPSTPACRHAPAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG
Sbjct:    1 MVVALRGGTLRPSCSSSCFFPARKRLLARVLLLFILAPFLQAHMPYGISVAAGSRWLSLGNAQLSVHSRNDLTTLILRSSGKGGYSRRAYHQVSGALCFISVRPRPASLPPSTPRRIKGCVSPIHVPGDMTAASPEASFSTASSQTRSTYPVPSPSRTSAHQHVDPPQQPRRRQRRPGLSLTSPPLSPSTPACRHAPAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|524403584|emb|CDB53956.1| (aTP-dependent DNA helicase recG [Azospirillum sp. CAG:239])

HSP 1 Score: 153.68 bits (387), Expect = 2.538e-36
Identity = 106/341 (31.09%), Postives = 166/341 (48.68%), Query Frame = 0
Query:  197 PAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEPEGRR-PLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            P ++ LF  +  + G+G   A+ +  +    ++DLL+HLP  + D      + + + G   TV +RV+ H EP+ ++ P  I C D         F  Y   L+    R   EGS   + GK+   +  + SL MSHP+ V    +     TVE +Y LT G+    +  ++R+AL                      P   +WL + +R+ +  P F+EAL  VHNP    D+  S+ AR+RLA+DE+LA QL  AL R   +K                        + G+G L   ++++LPF++T  Q++ + EI+AD AS + RM+RLLQGDVG+G
Sbjct:    4 PLLYPLFAGIENLNGIGEKTAKLVRNLTGDKIVDLLWHLPSSIIDRRYSPRLANARIGSIVTVKIRVLEHIEPKLKKLPYKIVCTDGSEEITLSFFHAYPETLK----RNLPEGSERVISGKL---ESFNGSLQMSHPDYVGRPEEMDRIKTVEAVYPLTGGITNKMINKYIRQALARV-------------------PKMPEWLDEHYRQAEGLPAFNEALAAVHNPQSDADILPSAPARRRLAYDEMLANQLALALVREKVKKQQGR-------------------EIRGNGLLRKKILEKLPFELTESQEKVLKEIFADQASPY-RMLRLLQGDVGSG 298          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|1119415083|ref|WP_072390541.1| (ATP-dependent DNA helicase RecG [Hyphomicrobium sp. CS1GBMeth3])

HSP 1 Score: 150.984 bits (380), Expect = 2.282e-35
Identity = 118/345 (34.20%), Postives = 162/345 (46.96%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGRM-----GIHT--VLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEP---EGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF +   +KGVGP     L +      G+    ++DLL+HLP GV D      V     G  AT+ VRV+ H  P     + P  +   D  G  LDL+FF   R  R F  R+   G    + G++ R  YG+ +L M+HP+ +     R D   +EP+Y LT GL+   L    R+AL                      P  ++WL  ++ +++ WPTF EAL R+H P    DV + S   QRLA+DELLA QL  A+ R                 SF +        V GDG L   +I  LPF +T  Q+  + EI  DM +   RM+RLLQGDVG+G
Sbjct:    9 LFASADALKGVGPHVVTLLKKALRLPPGVTQPRIVDLLWHLPTGVIDRRAEPTVAAAVPGTIATLKVRVLKHRAPPRGNNKAPYKVATEDETGR-LDLVFF---RAERSFVERQLPVGEERYVSGRIER--YGE-TLQMAHPDYIVAPEARGDLPLLEPVYPLTAGLSGKVLLKAERQALER-------------------APTLAEWLDAAWLKERGWPTFDEALRRIHRPDDAADVSAGSAPLQRLAYDELLANQLALAIVR----------------ESFKAQHGR---PVKGDGRLRERIIGALPFALTNSQRTALREIETDMGAPR-RMLRLLQGDVGSG 307          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|750645138|ref|WP_040927003.1| (DNA helicase RecG [SAR116 cluster alpha proteobacterium HIMB100])

HSP 1 Score: 150.599 bits (379), Expect = 3.937e-35
Identity = 114/346 (32.95%), Postives = 161/346 (46.53%), Query Frame = 0
Query:  197 PAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVV-GHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYL----RRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNV-TVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            P ++ALF  + ++ GVGP  AE L +     V+DLL HLPV V D  +   V D  +G  AT  + V+     P   R       ++ G  ++L+FF  + D     L    RR   G V R QG+          L M HP+ + +  ++ D +  +EP+Y LT GL A  + + ++  L+T                    P   +W+    +E + WP F  ALL+ H P  V D+  ++ AR RLAFDEL A QL   L R  + K A+                     + G G LT  L+  LPF  T  QKR ++EI AD  S   RM+RLLQGDVG+G
Sbjct:    7 PVIYALFAALTSLPGVGPKMAELLHKRTGRYVIDLLRHLPVSVIDRRERPSVNDAIDGQIATFDILVLKADIPPPRSRRPARVTAEATGGQIELIFFHAQTDYLRTTLPVGERRLISGRVERFQGR----------LQMPHPDFI-LPIEKADTLPQIEPVYPLTAGLKARTVSNAIKAGLKTI-------------------PYLDEWIDKDVKEARRWPDFKTALLQAHAPLSVSDLSPTAPARARLAFDELFANQLALGLIRQ-QTKTALPGR-----------------VIAGTGQLTERLLANLPFTPTTAQKRVISEIAADQTSPD-RMLRLLQGDVGSG 303          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|938279255|gb|KPQ14056.1| (ATP-dependent DNA helicase RecG [Rhodobacteraceae bacterium HLUCCO18])

HSP 1 Score: 150.214 bits (378), Expect = 4.768e-35
Identity = 113/335 (33.73%), Postives = 153/335 (45.67%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF  + T++GVGP  A S   + + T  DLL  LP G  D      +RD+    TATV V V  H  P GR P  +   D   +  +L+FF  + D    YL+R       R+     R +  D    M+HP+ V    +       EP+Y LT G+    +       +R  Q A A              P   +W+    +  K WP +H A+   H P   ED+  S+KAR+RLAFDEL+A QL  AL RA  R+             +   SS       GDG L   +++ LPF  T  Q R ++EI ADM ++  RM RLLQGDVG G
Sbjct:   17 LFAGLETLEGVGPKTARSFAGLAVETPKDLLLTLPQGGIDRSLKPTIRDVALPGTATVEVTVGRHRPPSGRGPYRVEV-DDAATRFELVFFHARGD----YLQRLLPTGARRIVS--GRLELFDGVAQMAHPDHVLTPEEAGTLPAFEPVYPLTAGVTQKTM-------VRAVQSALARV------------PELPEWIDAELKRQKDWPDWHIAVREAHAPEGPEDISRSAKARERLAFDELMAHQLTLALARASRRR-------------YKGFSSR------GDGRLRQKVLESLPFSPTGAQLRAISEIEADMGAET-RMSRLLQGDVGAG 305          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|356677562|gb|EHI49906.1| (ATP-dependent DNA helicase RecG [SAR116 cluster alpha proteobacterium HIMB100])

HSP 1 Score: 150.214 bits (378), Expect = 5.092e-35
Identity = 114/346 (32.95%), Postives = 161/346 (46.53%), Query Frame = 0
Query:  197 PAVHALFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVV-GHTEPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYL----RRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNV-TVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            P ++ALF  + ++ GVGP  AE L +     V+DLL HLPV V D  +   V D  +G  AT  + V+     P   R       ++ G  ++L+FF  + D     L    RR   G V R QG+          L M HP+ + +  ++ D +  +EP+Y LT GL A  + + ++  L+T                    P   +W+    +E + WP F  ALL+ H P  V D+  ++ AR RLAFDEL A QL   L R  + K A+                     + G G LT  L+  LPF  T  QKR ++EI AD  S   RM+RLLQGDVG+G
Sbjct:   21 PVIYALFAALTSLPGVGPKMAELLHKRTGRYVIDLLRHLPVSVIDRRERPSVNDAIDGQIATFDILVLKADIPPPRSRRPARVTAEATGGQIELIFFHAQTDYLRTTLPVGERRLISGRVERFQGR----------LQMPHPDFI-LPIEKADTLPQIEPVYPLTAGLKARTVSNAIKAGLKTI-------------------PYLDEWIDKDVKEARRWPDFKTALLQAHAPLSVSDLSPTAPARARLAFDELFANQLALGLIRQ-QTKTALPGR-----------------VIAGTGQLTERLLANLPFTPTTAQKRVISEIAADQTSPD-RMLRLLQGDVGSG 317          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|983022516|gb|KWT66874.1| (ATP-dependent DNA helicase RecG [Hyphomicrobium sulfonivorans])

HSP 1 Score: 149.828 bits (377), Expect = 6.135e-35
Identity = 116/345 (33.62%), Postives = 167/345 (48.41%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGR-----MGIHT--VLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEP---EGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF ++ ++ G+GP     + +      GI    V+DLL+HLP GV D      + D   G  AT+ VRV+ H  P   + R P  +   D  G  LDL+FF  +R    F  R+   G    + G+V R  Y DK L M+HP+ +     R D   +EP+Y LT GL+   ++   R+A+    P P                   +W + ++   + WPTF EAL R+H P   +D+ +S    QRLA+DELLA Q+  AL R                 +F +       +V GDG +   L   LPF++T  Q+  + EI ADMA+   RM+RLLQGDVG+G
Sbjct:   22 LFASLQSLSGIGPRLLLLMKKCVNLPAGITEPRVMDLLWHLPTGVVDRRAEPSIADAVPGSIATLKVRVLKHAAPPRGKSRAPYRVRVEDDTGK-LDLIFFHAER---KFIERQLPVGEERYVSGRVER--YTDK-LQMTHPDYIVPPEARDDLPLLEPVYPLTAGLSGKIVQKAARQAVDKLAPVP-------------------EWQEPTWLAKRAWPTFDEALQRLHRPVDADDISASGPPCQRLAYDELLAGQIALALVR----------------QNFKNRPGR---SVTGDGSVRTRLSAALPFKLTNSQREALREIEADMAAPR-RMLRLLQGDVGSG 320          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|1057055776|ref|WP_068462626.1| (DNA helicase RecG [Hyphomicrobium sulfonivorans])

HSP 1 Score: 149.828 bits (377), Expect = 6.354e-35
Identity = 116/345 (33.62%), Postives = 167/345 (48.41%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGR-----MGIHT--VLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEP---EGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF ++ ++ G+GP     + +      GI    V+DLL+HLP GV D      + D   G  AT+ VRV+ H  P   + R P  +   D  G  LDL+FF  +R    F  R+   G    + G+V R  Y DK L M+HP+ +     R D   +EP+Y LT GL+   ++   R+A+    P P                   +W + ++   + WPTF EAL R+H P   +D+ +S    QRLA+DELLA Q+  AL R                 +F +       +V GDG +   L   LPF++T  Q+  + EI ADMA+   RM+RLLQGDVG+G
Sbjct:    9 LFASLQSLSGIGPRLLLLMKKCVNLPAGITEPRVMDLLWHLPTGVVDRRAEPSIADAVPGSIATLKVRVLKHAAPPRGKSRAPYRVRVEDDTGK-LDLIFFHAER---KFIERQLPVGEERYVSGRVER--YTDK-LQMTHPDYIVPPEARDDLPLLEPVYPLTAGLSGKIVQKAARQAVDKLAPVP-------------------EWQEPTWLAKRAWPTFDEALQRLHRPVDADDISASGPPCQRLAYDELLAGQIALALVR----------------QNFKNRPGR---SVTGDGSVRTRLSAALPFKLTNSQREALREIEADMAAPR-RMLRLLQGDVGSG 307          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|563758581|ref|WP_023787421.1| (ATP-dependent DNA helicase RecG [Hyphomicrobium nitrativorans] >gi|563344675|gb|AHB48698.1| ATP-dependent DNA helicase RecG [Hyphomicrobium nitrativorans NL23])

HSP 1 Score: 149.443 bits (376), Expect = 9.800e-35
Identity = 121/345 (35.07%), Postives = 162/345 (46.96%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGRM-----GIHT--VLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHTEP---EGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF     +KGVGP     L +      G+    V+DLL+HLP GV D      V     G  AT+ VRV+ H  P     + P  I   D  G  LDL+FF   R  R F  R+   G+   + G+V R  YG+ +L M+HP+ +     R D   +EP+Y LT GL+   L    R+AL                      P  ++W   S+ + + WPTF +AL R+H P    DV   S   QRLA+DELLA QL  A+ R                 SF   S     +V G+G L   +++ LPF +T  Q   + EI ADMA+   RM+RLLQGDVG+G
Sbjct:    9 LFAEANVLKGVGPHVLTLLKKALRLPPGVTRPRVVDLLWHLPTGVIDRRAEPTVVAAVPGTIATLKVRVLKHKPPPRGNTKAPYKIATEDETGR-LDLVFF---RTERSFIERQLPVGAERYVSGRVER--YGE-TLQMAHPDYIVAPEARDDLPLLEPVYPLTAGLSGKALFKASRQALTR-------------------APDLAEWQNPSWLKQQGWPTFADALRRLHTPDDAADVSPMSAPLQRLAYDELLANQLALAIVR----------------ESFKGQSGR---SVRGNGRLRQKIVEALPFALTGSQSSALAEIEADMAAPR-RMLRLLQGDVGSG 307          
BLAST of EWM24241.1 vs. NCBI_GenBank
Match: gi|836611825|ref|WP_047763501.1| (DNA helicase RecG [Kiloniella spongiae] >gi|827518731|gb|KLN61419.1| ATP-dependent DNA helicase RecG [Kiloniella spongiae])

HSP 1 Score: 149.058 bits (375), Expect = 9.895e-35
Identity = 109/336 (32.44%), Postives = 168/336 (50.00%), Query Frame = 0
Query:  202 LFENVATIKGVGPAAAESLGRMGIHTVLDLLFHLPVGVFDWGQVKLVRDLQEGDTATVAVRVVGHT-EPEGRRPLTIHCLDSEGSPLDLLFFLYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTFQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHSSSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALVSSFSSISSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMASKHGRMVRLLQGDVGTG 536
            LF  V+T++GVGP  +    ++    VLDL +HLPVG+ D      + D      AT+ V V  H   P  R P  + C D  G  + L+FF  + D   + ++    G    + GK+ R  +GD  L M+HP+ +    +  D  TVEP+Y L+ G+    L   ++ +L          +LAP         +  +WL  S +E + W  +H  L +VH+P   +++ + S  R+RLA+DELLA QL  +L R  +     TAA   ++               GDG L G ++  LPF +T  Q +++ E+ ADM S + RM+RL+QGDVG+G
Sbjct:    9 LFTPVSTLQGVGPRLSTLYEKLAGGRVLDLCWHLPVGLVDRRYSPTIADAISDRVATLKVTVSRHIPSPNRRSPYRVICHDLTGE-MTLIFFHARGD---YIMKLLPVGEDRIISGKLER--FGD-VLQMAHPDHMVPPNEEEDVKTVEPVYPLSAGVTLKPLSKAIKASL----------ALAP---------VVPEWLDSSLKEQESWLDWHSCLQKVHHPQSEDELTAFSPYRKRLAYDELLANQLAISLVREQQ-----TAAKGRIIK--------------GDGSLRGKMLDILPFTLTGSQDQSIREVIADMESSN-RMLRLVQGDVGSG 298          
The following BLAST results are available for this feature:
BLAST of EWM24241.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105632|gb|EWM24241.1|0.000e+0100.00atp-dependent dna helicase, partial [Nannochlorops... [more]
gi|524403584|emb|CDB53956.1|2.538e-3631.09aTP-dependent DNA helicase recG [Azospirillum sp. ... [more]
gi|1119415083|ref|WP_072390541.1|2.282e-3534.20ATP-dependent DNA helicase RecG [Hyphomicrobium sp... [more]
gi|750645138|ref|WP_040927003.1|3.937e-3532.95DNA helicase RecG [SAR116 cluster alpha proteobact... [more]
gi|938279255|gb|KPQ14056.1|4.768e-3533.73ATP-dependent DNA helicase RecG [Rhodobacteraceae ... [more]
gi|356677562|gb|EHI49906.1|5.092e-3532.95ATP-dependent DNA helicase RecG [SAR116 cluster al... [more]
gi|983022516|gb|KWT66874.1|6.135e-3533.62ATP-dependent DNA helicase RecG [Hyphomicrobium su... [more]
gi|1057055776|ref|WP_068462626.1|6.354e-3533.62DNA helicase RecG [Hyphomicrobium sulfonivorans][more]
gi|563758581|ref|WP_023787421.1|9.800e-3535.07ATP-dependent DNA helicase RecG [Hyphomicrobium ni... [more]
gi|836611825|ref|WP_047763501.1|9.895e-3532.44DNA helicase RecG [Kiloniella spongiae] >gi|827518... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6399rna6399Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications