EWM24318.1, cds6382 (CDS) Nannochloropsis gaditana

Overview
NameEWM24318.1
Unique Namecds6382
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:424918..425848 -
Alignment locationCM002468.1:424323..424786 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24318.1
ProductAmino acid transporter, transmembrane
Orig transcript idgnl|cribi|Naga_100047g43.6081.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:424918..425848 -
CM002468.1supercontigCM002468.1:424323..424786 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Homology
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|585105710|gb|EWM24318.1| (Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 935.636 bits (2417), Expect = 0.000e+0
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
Query:    1 MMIQEDNDRIVHTEFPLSSRKKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDLIQGHSQC 464
            MMIQEDNDRIVHTEFPLSSRKKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDLIQGHSQC
Sbjct:    1 MMIQEDNDRIVHTEFPLSSRKKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDLIQGHSQC 464          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|545704275|ref|XP_005704461.1| (amino acid transporter, AAAP family [Galdieria sulphuraria] >gi|452820904|gb|EME27941.1| amino acid transporter, AAAP family [Galdieria sulphuraria])

HSP 1 Score: 154.451 bits (389), Expect = 5.019e-37
Identity = 140/493 (28.40%), Postives = 224/493 (45.44%), Query Frame = 0
Query:   23 RQRAAKHSI----NVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGIS--DIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEM-------------------------------IDLRLFPNEGPDHASFSEVSPLLTTGDNHSL----------DISWESC----GND------LRRHRMKMTAKYVGVRVGLVL-TTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDL 457
            R   AKH +    N+LK+F+G N+L + +A A AG + G + + +IA I+   CLLLV+++  +           D      TY  +   VLG  G  +V   LILTQ GYC GY+I++   L    GAS+S  V     L   L+ L ++  L+   PFS A+N +LL+GF+A+I+   SH R        W  S   I + P+ FG I ++ EGIG ++ VE SM   +SR+ +  ++   + +++ +  + G +G   +GE   S+I+ N+         +  L +G+ FTY  Q+ P+ +                                +D     +E  D A+   V   L  GD  +           D+S E+      ND       RR   +   K V  R+ +V  T +  A     F L  AL+GS+GA  LA++ P +  L L+R       K   + ++I G+VG  IG   ++ ++
Sbjct:  212 RSELAKHLVGDIGNMLKAFIGLNFLYVSYAFAHAGLIRGTIGLIVIALITEHCCLLLVQVKNQM--------PEADDPSFRITYGDLGKYVLGGIGEKLVNGALILTQFGYCTGYLIFLGQTLHDLFGASVSPSVFVLIPLP-ILIPLSMLRSLRSLAPFSLAANFSLLIGFIAVISYIGSHFR--------WQPSSPSITQFPIFFGQITSALEGIGLVVPVEQSM---KSRKHFKMVIEVAIGILSGVLLVVGALGFVTFGENTRSIIVLNMGNSPVVGLVKIVLCIGILFTYPLQLVPIVQAAEDWLAGRTITSSHGEPLEEYHEEEEEGEFSMDEVSSESEDLDSATEEAVPKELDIGDGENYYQRDNLGDGSDLSDETSEPEWANDEDLQHVKRRSLFERNPKNVMARLTIVFGTAATAALAGSSFGLFQALVGSLGAASLAYIFPSLFHLKLFRTQLTLSEKTKNMIILIFGLVGMVIGTYVSIMEM 684          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|695457384|ref|XP_009537183.1| (hypothetical protein PHYSODRAFT_352935 [Phytophthora sojae] >gi|348667792|gb|EGZ07617.1| hypothetical protein PHYSODRAFT_352935 [Phytophthora sojae])

HSP 1 Score: 148.673 bits (374), Expect = 3.074e-36
Identity = 110/400 (27.50%), Postives = 196/400 (49.00%), Query Frame = 0
Query:   28 KHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVI-LNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNS 426
            K  IN   +FLGS  L +P+A    G L G + +  +A +S +  +L+V+ +  L +Q +           V  Y ++    +G  G  +V + L+++Q G+CI Y+I++ST   +F    +S+Q++   +  P L+   L+  +K     +  ++   ++G L ++   + +       D    I  +  +P  FG     FEG+G +L +E SM   Q++  + P+L  T++++T L++ FGI G  A+G++  +VI LN    G      +  L +GLFFTY   ++PVFE++                   P++             +CGN L   R+    K V +R G+VL T++IA  +P+F   ++ IGS    +LAF++P    L L+R+ 
Sbjct:   63 KTFINTCIAFLGSGVLGLPYAFRRCGVLVGFVTLVGVAAVSTYAMMLVVQCKYKLKQQGKN----------VTKYGEIGFFAMGQFGSTLVNSALVISQTGFCIAYLIFISTNAHKFL--DVSKQLVV-SVCVPPLIGFSLLKHMKELAYVALLADFMCILGLLVVLNIDLGYMEQ--DHDNIEAIGVVSAVPFFFGVASYCFEGVGMVLPLENSM---QNKRNFTPILVCTVVIITALYATFGICGYLAFGDDTDAVITLNFEGSGGLVTLVKIFLCLGLFFTYPVMLFPVFEVL------------------QPMV-------------ACGNKLEDSRIT-ERKGVLLRAGVVLFTAVIAAAIPDFGRFISFIGSTCCSLLAFIMPAYFHLRLFRDE 412          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|953488082|emb|CEG48099.1| (amino acid auxin permease family [Plasmopara halstedii])

HSP 1 Score: 144.436 bits (363), Expect = 1.087e-34
Identity = 115/460 (25.00%), Postives = 208/460 (45.22%), Query Frame = 0
Query:    6 DNDRIVHTEFPLSSRKKRQRAA---------KHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNIS-RGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFY----HKLSYISLIILGVVGGSIGAA 451
            +ND     +  L +  + Q A          K  IN   +FLGS  L +P+A    G L G + +  +A +S +  +L+V+ +  L +Q   +   GD          +    +G  G  +V   L+++Q G+C  Y+I+++    +F   S   + +   +  P LV   L+  ++     +  ++   ++G L ++   +S+       D    I  +  +P  FG     FEG+G +L +E SM   + +E + P+L  T++++T L++ FG+ G  A+G+E  +VI  N+   G      +  L +GLFFTY   ++PVFE++                   PLL  G+                     M  K + +R G+VL T++IA  +P+F   ++ IGS    +LAF++P    L L+R+    Y    H+    ++++LG +   +G A
Sbjct:   37 ENDMCDSMQKRLETPAQHQHANAALHLSSDLKTFINTCIAFLGSGVLGLPYAFRKCGILLGLVTLVGVAALSTYAMMLVVQCKYKLKQQGNMVSKYGD----------IGYFAIGHIGAIIVNTALVISQTGFCTAYLIFIAFNANKFLNVS---KYLIIVVCVPPLVIFSLLRHMRELAYVALLADFMCILGLLVVLTIDLSYMNL--NQDYVEPIGVLSAVPFFFGVASYCFEGVGMVLPLENSM---RYKENFQPILVCTIVIITSLYATFGVCGYLAFGDETDAVITLNVEGSGGLVTLVKMFLCLGLFFTYPVMLFPVFEVLQ------------------PLLLGGNKF--------------EDAQSMHKKSIILRAGIVLITAVIAAAIPDFGRFISFIGSTCCSLLAFILPAFFHLRLFRDEPRTYWTWLHRFFLCAVMLLGFIMLGVGVA 446          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|1005462389|ref|XP_015768245.1| (PREDICTED: proton-coupled amino acid transporter 1-like [Acropora digitifera])

HSP 1 Score: 145.206 bits (365), Expect = 1.393e-34
Identity = 124/497 (24.95%), Postives = 227/497 (45.67%), Query Frame = 0
Query:   32 NVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRK----------------DLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYM-STALRQFTGASLSQQVITFG----LLFPSLVC-------------------------LCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSW---GISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVS---PLLTTGDN------HSLDISWESCGNDL------RRHRMKMTAKYVGVRVGLVLTTSIIAYFVP-EFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDLIQGHSQ 463
            NV K+F+G+N++ +PFA   +G + G + I +IA ++   C L+++ ++                D+  Q  Q  +  D       Y  +A + +G  G  +V   L+ TQ G+C+GY I+M +T +  FT  S     +  G    +  PS V                             +  ++   P SF +NIAL + FL++I         +  F   W    ++     P+ FG + +++EGIGT++ +E SMA+ + R  +P  L   +  ++ + + FG++G   YGEE+  ++  +   G      +  L   +  TY  Q+ P+ E+++  LF +E   +A  +E S    L T+ D+       +  ++   C   L       + R++   K + +R  LVL+T+ IA  +  +F  + A++GSVG+  L F++P +  LVL + +     K     LI  G+VGG +G    +  +++  S+
Sbjct:   29 NVFKAFIGTNWIGLPFAFKESGFVLGLVGILVIAVVTDHCCQLVIKCKRAAVQKVLDTVCLSDVTDVESQLTQAALLRDTVEKRMQYGDIARIAMGKWGVLLVNMALLATQYGFCVGYFIFMGNTIVSMFTTVSSVPSTLHNGSASNVTSPSNVASSPSHSHQAPPFALIVLIPLLPLILFSYIRGVRRLGPISFMANIALFVAFLSVIG------YMLNGFKFKWHEMKLARWATFPVFFGQVTSAYEGIGTLIPIETSMAESKHR--FPLYLHFAIGGLSAILACFGMLGYLVYGEEVAQIVTRSFHPGPLVLVVQCLLCFAILLTYPLQLVPIIEIVESWLFKSEA-KNAITTESSLNNDLSTSSDDVMISQVDTKSVTVNECSRLLAPEIPKEKSRLRQWKKNL-LRTFLVLSTAGIAIALKRDFAFVSAIVGSVGSSTLGFILPCVFHLVLCKETNTRLIKAKDCLLIAFGLVGGVVGLTVTIMQIVEQFSK 515          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|635371281|emb|CCI40681.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 142.51 bits (358), Expect = 6.512e-34
Identity = 122/444 (27.48%), Postives = 206/444 (46.40%), Query Frame = 0
Query:   11 VHTEFPLSSRKKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGA-----YADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYR----NSALFYHKLSYISLIILGVVG 445
            VHT  P           K  +N L +FLGS  L IPF     G L G   +  +A I+ F  LL+VR + +L ++  ++++          Y+ +   V+G AG  VV   +I +Q G+C+ Y+I+++T +  + G      V    +  P L+   LV  LK     +  ++I  L G LA++ +      A     + +    I  +P  FG     FEG+G +L +E SM   ++++ +  +L  T++++T +++ FGI G  A+GE    V+  N+  G             CL VGLFFTY   + PVFE++   +       H+  +E S  L   D        ES   +   H     ++   +R G VL T ++A  VP+F   ++ IG+    +LA+V+P    L ++      +  +YH    I L+++G +G
Sbjct:   39 VHTADP-----SLASDGKTFLNTLIAFLGSGVLGIPFVFKETGILLGVFTLIFVASINTFCMLLIVRCKYELRKRGEEVNL----------YSDIGYAVMGKAGACVVNIAIIFSQTGFCVSYLIFIATNVHAYLGVPREAAV---AICLPLLIVFSLVRHLKQLAYAALVADIMNLTG-LAVVYSVDFEFMAYNDDQIKF-FGVISSLPFFFGVASYCFEGVGMVLPLEKSM---RNKQNFSTILIATMVIITTIYATFGICGYLAFGEATKDVLTLNMENGGEKFNFLTILVNVCLCVGLFFTYPLMLVPVFEIMQSWI-------HSPNTEES--LKKDDVQ----RSESLAVNRTSH-----SRTTCLRSGAVLLTGLVAAGVPDFGPFISFIGATCCSLLAYVLPTFFYLHIFYGVNGENTPWYHDYYRIGLLLIGALG 441          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|301110066|ref|XP_002904113.1| (Amino Acid/Auxin Permease (AAAP) Family [Phytophthora infestans T30-4] >gi|262096239|gb|EEY54291.1| Amino Acid/Auxin Permease (AAAP) Family [Phytophthora infestans T30-4])

HSP 1 Score: 140.584 bits (353), Expect = 2.948e-33
Identity = 111/404 (27.48%), Postives = 196/404 (48.51%), Query Frame = 0
Query:   28 KHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWG----ISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVI-LNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNS 426
            K  IN   +FLGS  L +P+A    G L G + +  +A +S +  +L+V+ +  L +Q +           V  Y ++    +G  G  +V   L+++Q G+CI Y+I++++   +F    +S+Q++   +  P L+   L   L+H    ++   +ALL  F+ I+   +     +G  D++      I  +  IP  FG     FEG+G +L +E SM   +++  + P+L  T++++T L++ FGI G  A+G +  +VI LN    G      +  L +GLFFTY   ++PVFE++                   P++             +CGN L   +     K + +R G+VL T++IA  VP+F   ++ IGS    +LAF++P    L L+ + 
Sbjct:   71 KSFINTCIAFLGSGVLGLPYAFRKCGILVGFVTLVGVAAVSTYAMMLVVQCKYKLKQQGKT----------VTKYGEIGYFAMGQMGSAIVNTALVISQTGFCIAYLIFIASNAHKFL--DVSKQLVV-SVCVPPLIGFTL---LRHMRELAY---VALLADFMCILGLLVVLNIDLGYMDINHDYIEPIGVVSAIPFFFGVASYCFEGVGMVLPLENSM---RNKHNFMPILVCTVVIITSLYATFGICGYLAFGNDTDAVITLNFEGSGGLVTLVKVFLCLGLFFTYPVMLFPVFEVLQ------------------PMV-------------ACGNKLENPQTTQK-KGIVLRAGVVLLTAVIAAGVPDFGRFISFIGSTCCSLLAFILPAFFHLRLFSDE 420          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|675183679|ref|XP_008900724.1| (hypothetical protein PPTG_08398 [Phytophthora parasitica INRA-310] >gi|566030616|gb|ETI53527.1| hypothetical protein F443_03544 [Phytophthora parasitica P1569] >gi|567968248|gb|ETK93391.1| hypothetical protein L915_03427 [Phytophthora parasitica] >gi|568025920|gb|ETL99921.1| hypothetical protein L917_03306 [Phytophthora parasitica] >gi|568056371|gb|ETM53083.1| hypothetical protein L914_03408 [Phytophthora parasitica] >gi|568098929|gb|ETN13647.1| hypothetical protein PPTG_08398 [Phytophthora parasitica INRA-310] >gi|570334257|gb|ETO82205.1| hypothetical protein F444_03612 [Phytophthora parasitica P1976] >gi|570334272|gb|ETO82220.1| hypothetical protein F444_03623 [Phytophthora parasitica P1976] >gi|570958355|gb|ETP23334.1| hypothetical protein F441_03538 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 139.813 bits (351), Expect = 6.077e-33
Identity = 108/422 (25.59%), Postives = 204/422 (48.34%), Query Frame = 0
Query:   28 KHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVI-LNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALF----YHKLSYISLIILGVV 444
            K  IN   +FLGS  L +P+A    G L G + +  +A +S +  +L+V+ +  L +Q            ++  Y ++    +G  G  +V   L+++Q G+CI Y+I++++   +F    +S+Q++   +  P LV   L+  ++     +  ++   ++G L ++   +S+      +    G+  +  IP  FG     FEG+G +L +E SM   +++  + P+L  T++++T L++ FGI G  A+G +  +VI LN    G      +  L +GLFFTY   ++PVFE++                   P++             +CGN L   +     K + +R G+VL T+++A  +P+F   ++ IGS    +LAF++P    L L+++         H+L    +++LG V
Sbjct:   74 KTFINTCIAFLGSGVLGLPYAFRKCGILMGLVTLVGVAAVSTYAMMLVVQCKYKLKQQGN----------IISKYGEIGYFAMGHIGSVIVNTALVISQTGFCIAYLIFIASNAHKFL--DVSKQLVV-SVCVPPLVGFSLLRHMRELAYVALLADFMCILGLLVVLNIDLSYMDLDHDYIEPMGV--VSAIPFFFGVASYCFEGVGMVLPLENSM---RNKHNFMPILVCTVVIITSLYATFGICGYLAFGNDTNAVITLNFEGSGGLVTLVKIFLCLGLFFTYPVMLFPVFEVLQ------------------PMV-------------ACGNKLENPQTTQK-KGILLRAGIVLLTAVVAAGIPDFGRFISFIGSTCCSLLAFILPAFFHLRLFQDEPSTCGNRLHQLFLCGMMLLGFV 445          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|567996697|gb|ETL46801.1| (hypothetical protein L916_03379 [Phytophthora parasitica] >gi|570994126|gb|ETP51324.1| hypothetical protein F442_03524 [Phytophthora parasitica P10297])

HSP 1 Score: 139.428 bits (350), Expect = 8.613e-33
Identity = 108/422 (25.59%), Postives = 204/422 (48.34%), Query Frame = 0
Query:   28 KHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVI-LNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALF----YHKLSYISLIILGVV 444
            K  IN   +FLGS  L +P+A    G L G + +  +A +S +  +L+V+ +  L +Q            ++  Y ++    +G  G  +V   L+++Q G+CI Y+I++++   +F    +S+Q++   +  P LV   L+  ++     +  ++   ++G L ++   +S+      +    G+  +  IP  FG     FEG+G +L +E SM   +++  + P+L  T++++T L++ FGI G  A+G +  +VI LN    G      +  L +GLFFTY   ++PVFE++                   P++             +CGN L   +     K + +R G+VL T+++A  +P+F   ++ IGS    +LAF++P    L L+++         H+L    +++LG V
Sbjct:   74 KTFINTCIAFLGSGVLGLPYAFRKCGILMGLVTLVGVAAVSTYAMMLVVQCKYKLKQQGN----------IISKYGEIGYFAMGHIGSVIVNTALVISQTGFCIAYLIFIASNAHKFL--DVSKQLVV-SVCVPPLVGFSLLRHMRELAYVALLADFMCILGLLVVLNIDLSYMDLDHDYIEPMGV--VSAIPFFFGVASYCFEGVGMVLPLENSM---RNKHNFMPILVCTVVIITSLYATFGICGYLAFGNDTNAVITLNFEGSGGLVTLVKIFLCLGLFFTYPVMLFPVFEVLQ------------------PMV-------------ACGNKLENPQTTQK-KGILLRAGIVLLTAVVAAGIPDFGRFISFIGSTCCSLLAFILPAFFHLRLFQDEPSTCGNRLHQLFLCGMMLLGFV 445          
BLAST of EWM24318.1 vs. NCBI_GenBank
Match: gi|873218248|emb|CEM39819.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 141.354 bits (355), Expect = 8.868e-33
Identity = 119/460 (25.87%), Postives = 204/460 (44.35%), Query Frame = 0
Query:   18 SSRKKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLRQHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQ--QVITFGLLFPSLVCLCLVP--------DLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHASFSEVSPLLTTGDNHSLDISWESCGNDLRRHRMKMTAKYVG--VRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIG----AAYALHDLIQGH 461
            +  KK    AK  +N   +F+G+  L +P+A + +G L G   ++++A ++   C+LL+   K  L   R  ++        +TY  +     G  G  VVE FL++TQ G+CI Y+I        F G +L+     ++FG     +V  CL          D++H    S  ++   L G   +    +    A+     +  I+    +P  FG  +  FEGIG +L +E SM   + ++ +  L    +LLVT LF  FG++G  A+G +   ++ +N+     +   RG L +GLF TY   + PVFE+++  L                                     +  R+  T  + G  +R  LV+ T +++  VP F + ++L+GS  +  LAF++P +  L L  +    +  +     I LGV G  +G    AA+ +H L+ G 
Sbjct:  196 TDEKKGTGLAKTELNAFIAFIGAGILDLPYAFSQSGVLLGTAFLSLLA-VTALHCMLLLVDCKYYLMNERHKNI--------KTYGDIGWHAFGKTGSVVVEVFLVITQTGFCIAYLI--------FIGENLANVFHFVSFG----EIVMYCLPLLVLLCWLRDMRHLAWSSLLADATNLFGLGVVYFFDLHRLVAVRKAPPAVAIARSSTLPFFFGVGLYCFEGIGMVLPIENSM---KDKQHFKKLWSLNMLLVTTLFISFGLLGYCAFGSDTDEIVTHNLPHNVISVLVRGALSLGLFLTYPIMLVPVFEILEETL------------------------------------CKDQRLVGTCSWKGNLLRASLVVLTGMVSVAVPNFNIFISLVGSSASTCLAFLLPALFHLKLRWDELRSWQVVRECLCIALGVGGAVLGTTHSAAHLIHLLVSGE 595          
The following BLAST results are available for this feature:
BLAST of EWM24318.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105710|gb|EWM24318.1|0.000e+0100.00Amino acid transporter, transmembrane [Nannochloro... [more]
gi|545704275|ref|XP_005704461.1|5.019e-3728.40amino acid transporter, AAAP family [Galdieria sul... [more]
gi|695457384|ref|XP_009537183.1|3.074e-3627.50hypothetical protein PHYSODRAFT_352935 [Phytophtho... [more]
gi|953488082|emb|CEG48099.1|1.087e-3425.00amino acid auxin permease family [Plasmopara halst... [more]
gi|1005462389|ref|XP_015768245.1|1.393e-3424.95PREDICTED: proton-coupled amino acid transporter 1... [more]
gi|635371281|emb|CCI40681.1|6.512e-3427.48unnamed protein product [Albugo candida][more]
gi|301110066|ref|XP_002904113.1|2.948e-3327.48Amino Acid/Auxin Permease (AAAP) Family [Phytophth... [more]
gi|675183679|ref|XP_008900724.1|6.077e-3325.59hypothetical protein PPTG_08398 [Phytophthora para... [more]
gi|567996697|gb|ETL46801.1|8.613e-3325.59hypothetical protein L916_03379 [Phytophthora para... [more]
gi|873218248|emb|CEM39819.1|8.868e-3325.87unnamed protein product [Vitrella brassicaformis C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6397rna6397Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications