EWM24309.1, cds6378 (CDS) Nannochloropsis gaditana

Overview
NameEWM24309.1
Unique Namecds6378
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:415459..415575 +
Alignment locationCM002468.1:415784..417487 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24309.1
Productaspartyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100047g38.6072.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:415459..415575 +
CM002468.1supercontigCM002468.1:415784..417487 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006422aspartyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004815aspartate-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR020719RNA3'_term_phos_cycl-like_CS
IPR018150aa-tRNA-synt_II-like
IPR009068S15_NS1_RNA-bd
IPR004364aa-tRNA-synt_II
IPR004523Asp-tRNA_synthase_arc
IPR012340NA-bd_OB-fold
IPR000738WHEP-TRS
IPR002312Asp/Asn-tRNA-synth_IIb
Homology
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|585105701|gb|EWM24309.1| (aspartyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1246.88 bits (3225), Expect = 0.000e+0
Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0
Query:    1 MASKEEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKVDPRKAAKEARAAKRAAGGVDQATSTSSNSGGNASDAATSNSGSAPSVPSLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEASEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            MASKEEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKVDPRKAAKEARAAKRAAGGVDQATSTSSNSGGNASDAATSNSGSAPSVPSLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEASEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP
Sbjct:    1 MASKEEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKVDPRKAAKEARAAKRAAGGVDQATSTSSNSGGNASDAATSNSGSAPSVPSLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEASEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|298709437|emb|CBJ31343.1| (Aspartyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0
Identity = 335/612 (54.74%), Postives = 422/612 (68.95%), Query Frame = 0
Query:    5 EEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKVDP-RKAAKEARAAKRAAGGVDQATSTSSNSGGNASDAATSNSGSA-PSVPSLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEAS--------EDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            EE+  +I+ KG+EIRQLK  K+ KD +   +  L  LK K++ TTG  +  P    K K     T  A      VDP +K+ K+ +  K+ A                 ++AA S  GSA  S P  +  +YG+LPMVQS  MT + +  +  L+ ++AG+ + LR R+HTSR++ KGVFL+LRQ + TVQA V+ G  V + MV++A  V +ESVID+ GTL     PV   T + VE++++E++VVSAA+  +P  + DA RP+ +        ++ + P+V  D RL+YRWID RT ANQAIF+IQ  V Q FR  L+ +GFVEIH+PKLL GASE GS VFT  YF    CLAQSPQLYKQMA ACGGF +V EVGPVFRAEKS THRHLCEFTGLD EM I EHY+EVLE+FSDLFI IFD +      EL+AV  QHPFE L++ RP+LRL+F EG+ LL +AGYDA  + DL TE EK LG +V EKY TDF+MMD+YPL VRPFYTMPCP +P  SNSFD+FIRGEEIVSGAQRIHD+E L ER     +P +++ +Y+DAF+HGA PHGGGGIGLERVVML+LGLKNIRKTS+FPRDPKR AP
Sbjct:    8 EELAVMIEDKGNEIRQLKFAKTSKDDLKPHIDELLALKTKFQSTTGAPYVAPGQEKKTKPAPAATPAA-----PVDPNKKSKKQLQREKKEAEKAIAKAKAKEERERKQAEAAASGGGSAHESTPEGQEWRYGDLPMVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDVSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEEIHVVSAADTFMPVIVADAMRPDRTPEEEEKQEKEGKAPTVAADTRLDYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEIHSPKLLAGASEGGSEVFTTNYFGTEACLAQSPQLYKQMAAACGGFGRVMEVGPVFRAEKSRTHRHLCEFTGLDFEMVIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFEDLRYARPTLRLTFQEGIQLLIDAGYDADPLGDLSTEHEKKLGDLVAEKYGTDFFMMDKYPLDVRPFYTMPCPSNPKHSNSFDIFIRGEEIVSGAQRIHDLEFLKERAREHDIPLDSIMSYLDAFKHGAEPHGGGGIGLERVVMLFLGLKNIRKTSMFPRDPKRCAP 614          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|635368536|emb|CCI43251.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 291/476 (61.13%), Postives = 366/476 (76.89%), Query Frame = 0
Query:  134 YGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            +G  P++QS          +D L     G +V +RG L   R+  K  FLLLRQ +A++QA++ +   V K M+KFA  +P+ESV++++ T+T  ++P+ S + + +E+QV +L+++S A   LPFQ+EDA+RP+A   +E      VG+D RLN R +D RT ANQAI RIQ GV +LFREFL E+GF+EIHTPKL+GGASESG+SVF L YFDQ  CLAQSPQ YKQMACACGG E+V+E+GPVFRAE S THRH+CEF GLDLEM I +HY+EV++LFSDLFIYIFDNL  RFA +L AVN+QHPFEPL++ +PSL LSF EGV +L EAG   +  +DL TE EK LG +VKEKY TDFY++D+YPLSVRPFYTMP  +D   SNS+D+ IRGEEIVSGAQR+HD +LL +R+DA+ VP+ETL+TY+DAFR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   51 FGEKPLLQSQQKYQNSANNVDQLHLVETGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILSESDQVPKAMIKFASGIPKESVVEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQVEDAARPDALVKAEGSTFADVGLDTRLNTRVLDLRTPANQAIMRIQAGVCRLFREFLDEKGFIEIHTPKLIGGASESGASVFKLKYFDQEACLAQSPQTYKQMACACGGLERVYEIGPVFRAENSNTHRHMCEFVGLDLEMVIQDHYHEVVQLFSDLFIYIFDNLTARFADQLAAVNEQHPFEPLKYKKPSLILSFEEGVKMLHEAGAKQNPEDDLSTENEKWLGNLVKEKYDTDFYILDKYPLSVRPFYTMPDAEDTRWSNSYDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKETLKTYIDAFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 526          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|635368537|emb|CCI43252.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0
Identity = 291/479 (60.75%), Postives = 368/479 (76.83%), Query Frame = 0
Query:  134 YGNLPMVQS---LGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            +G  P++QS      +   +  +D L     G +V +RG L   R+  K  FLLLRQ +A++QA++ +   V K M+KFA  +P+ESV++++ T+T  ++P+ S + + +E+QV +L+++S A   LPFQ+EDA+RP+A   +E      VG+D RLN R +D RT ANQAI RIQ GV +LFREFL E+GF+EIHTPKL+GGASESG+SVF L YFDQ  CLAQSPQ YKQMACACGG E+V+E+GPVFRAE S THRH+CEF GLDLEM I +HY+EV++LFSDLFIYIFDNL  RFA +L AVN+QHPFEPL++ +PSL LSF EGV +L EAG   +  +DL TE EK LG +VKEKY TDFY++D+YPLSVRPFYTMP  +D   SNS+D+ IRGEEIVSGAQR+HD +LL +R+DA+ VP+ETL+TY+DAFR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   51 FGEKPLLQSQQKYQNSANKYQNVDQLHLVETGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILSESDQVPKAMIKFASGIPKESVVEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQVEDAARPDALVKAEGSTFADVGLDTRLNTRVLDLRTPANQAIMRIQAGVCRLFREFLDEKGFIEIHTPKLIGGASESGASVFKLKYFDQEACLAQSPQTYKQMACACGGLERVYEIGPVFRAENSNTHRHMCEFVGLDLEMVIQDHYHEVVQLFSDLFIYIFDNLTARFADQLAAVNEQHPFEPLKYKKPSLILSFEEGVKMLHEAGAKQNPEDDLSTENEKWLGNLVKEKYDTDFYILDKYPLSVRPFYTMPDAEDTRWSNSYDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKETLKTYIDAFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 529          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|325192924|emb|CCA27311.1| (aspartyltRNA synthetase putative [Albugo laibachii Nc14])

HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0
Identity = 290/479 (60.54%), Postives = 371/479 (77.45%), Query Frame = 0
Query:  134 YGNLPMVQSLGM---TDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            +G  P++QS      + + +  I  L  +  G +V +RG L   R+  K  FLLLRQ +A++QA++ +   V + M+KFA  +P+ESV++++ T+T  ++P+ S + + +E+QV +L+++S A   LPFQ+EDA+RP+A   +E      VG+D RLN R +D RT ANQAI RIQ GV +LFREFL ++GFVEIHTPKL+GGASESG+SVF L YFDQ  CLAQSPQ YKQMACACGG E+V+E+GPVFRAE S THRH+CEF GLDLEM I EHY+EV++LFSDLFIYIFDNL  RFA EL AVNKQHPFEPL++ +PSL LS+ EGV +L EAG + +  +DL TE EK LGR+VKEKY TDFY++++YPL+VRPFYTMP  +D   SNS+D+ IRGEEIVSGAQR+HD +LL +R+DA+ VP+E+L+TY+DAFR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   51 FGEKPLLQSQHENQDSTKKYHNIGQLHLAEKGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILTESDQVPRTMIKFASGIPKESVVEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQVEDAARPDALVKAEGSTFADVGLDTRLNTRVLDLRTPANQAIMRIQAGVCRLFREFLDDKGFVEIHTPKLIGGASESGASVFKLKYFDQEACLAQSPQTYKQMACACGGLERVYEIGPVFRAENSNTHRHMCEFVGLDLEMVIQEHYHEVVQLFSDLFIYIFDNLTARFADELAAVNKQHPFEPLKYKKPSLILSYEEGVKMLHEAGAEQNSEDDLSTENEKWLGRLVKEKYDTDFYILNKYPLAVRPFYTMPDSEDTRWSNSYDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKESLKTYIDAFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 529          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|1072233176|gb|OEU17907.1| (aspartyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 299/621 (48.15%), Postives = 407/621 (65.54%), Query Frame = 0
Query:    3 SKEEIEALIKAKGDEIRQLKAEKSEKDTILAQVALLNELKAKYKETTGEDFGPPPSSSKKKGEAKKTDGAPACGLKVDPRKAAKEARAAKRAAGGVDQATSTSSNSGGNASDAATSNSGSAPSVPSLESAKYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEASEDPE-----------------MPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            + EEI + I   G++I+Q K EK  ++     +  +  LK ++KE TG D+GPPP   K K E   T+ +                   ++ A    +  + ++    N ++ A      A  +  + +  +G+ P+++S  +T+R W  I+ L+P     +VL+RG L TSR+VGKGVF+ +R  + TVQ V + G  +   M+K+   +P ES++D+ G ++ P EP++S T ++VE+Q+     V+ +   +PFQ+EDA RP+  ++ +                 +P+VG++NRL+YRWID RT ANQ IFRI+  V  LFR  L +RGF+E+H+PKLL G+SE G+ VFTL YFDQ  CLA SPQL KQ  CAC GFEKVF  GPVFRAE S T RHLCEFTG D+EM I EHY EVL++FSDLFI+IFD L  R   E++AV +QHPFE L++  P+L+L++AEG ALLR AG D  + +DL TE EK LG +V EKY TDF+ MD+YPLSVRPFYTMPCP +P LSNS+D FIRG+EI+SGAQRIH  +LL ER  A GV  +    Y+++F++GALPHGGGGIGLERVVML+LGL NIRK + FPRDPKRL+P
Sbjct:    4 TAEEITSEIAVLGEKIKQAKIEKKTQEFWGEFLQSMLALKTQFKELTGTDYGPPPKEKKVKNEGSVTEASDK---------------NKEKRAKKAAEKAAKAAKQEANRAERAAREKAKADKLSGVGADNFGDTPLIKSEFVTNRTWTSIENLTPQLNTSKVLIRGFLQTSRSVGKGVFVKIRSTMYTVQGVCFTGTEISPDMIKYISGLPVESIVDVEGVVSIPNEPIDSCTQKMVELQITSFKCVTRSIQPMPFQMEDAMRPDCEKESDVGHYEGNDSLANKRSDGLPTVGLENRLDYRWIDLRTPANQGIFRIESMVGVLFRGLLVDRGFIELHSPKLLKGSSEGGADVFTLDYFDQKACLAMSPQLQKQQVCACAGFEKVFVTGPVFRAENSHTRRHLCEFTGFDMEMVIKEHYDEVLDVFSDLFIHIFDGLNKRCKTEIEAVREQHPFEDLKYLNPTLKLTYAEGCALLRSAGVDQDDYDDLSTENEKKLGDLVSEKYGTDFFFMDKYPLSVRPFYTMPCPKNPKLSNSYDFFIRGQEILSGAQRIHTTDLLEERAKAWGVDLDD--AYLNSFKNGALPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRLSP 607          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|219120825|ref|XP_002185644.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582493|gb|ACI65114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 610.142 bits (1572), Expect = 0.000e+0
Identity = 289/495 (58.38%), Postives = 366/495 (73.94%), Query Frame = 0
Query:  133 KYGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGP----GVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA----------SEDPE-------MPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
             +G+ P++QS  +TD+VW  I  L PS AG+ VL+RG L T+RAVGKG F+L+R  + +VQ V ++       V   M+K+   +P ESV+D+ G +T P +PV+SAT ++VE++++  + V+ A+  LPFQ+EDA RP++           +DPE       +  +G   RL+YRWID RT ANQ+IFRI+  V  LFREFL +RGFVEIHTPKL+GGASE GS VFTL YF QS CLA SPQL+KQM  AC GFE+VFE GPVFRAE S T RHLCEFTGLDLEM IHEHY EVL + S+LFIYIFD +  R   EL+ V +QHPFE LQ+  P+L+L+FAEG ALLREAG D    EDL TE EK LG IVK+KY TDF+ +D++PL+VRPFYTMP P+DP LSNS+D FIRG+EIVSGAQR+HD +L+ ER  A+G+  E++  Y+++FRHGALPHGGGGIGLERVVML+LGL NIRK + FPRDPKR++P
Sbjct:   85 NFGDAPLIQSQIITDKVWTPIQNLKPSLAGESVLVRGHLQTARAVGKGAFVLVRSSLYSVQGVAFESKDDDGAVSSAMIKYMAGLPAESVVDMRGIVTVPDQPVDSATQKMVEIKIESFHCVAKAKKALPFQMEDACRPDSGKETDIGAYNEDDPEVVDSEDGLIHIGQKMRLDYRWIDLRTPANQSIFRIESMVGCLFREFLLQRGFVEIHTPKLIGGASEGGSDVFTLDYFGQSACLAMSPQLHKQMTAACSGFERVFETGPVFRAENSNTRRHLCEFTGLDLEMVIHEHYDEVLAVMSELFIYIFDGVNERCKPELERVREQHPFEDLQYLSPTLKLTFAEGCALLREAGIDQDNYEDLSTENEKKLGDIVKQKYGTDFFFLDKFPLAVRPFYTMPDPNDPKLSNSYDFFIRGQEIVSGAQRVHDPDLIEERAKALGIDVESIADYVESFRHGALPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRISP 579          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|570317134|gb|ETO65082.1| (aspartate-tRNA(Asn) ligase [Phytophthora parasitica P1976])

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 289/476 (60.71%), Postives = 359/476 (75.42%), Query Frame = 0
Query:  134 YGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            YG LP++QS     + +  +  L+P   G+   +RG L   RA  K  F+ LR+  AT+QA++++   V + M+KFA  VP+ESV+D+  TLT P  PV S T + VE+ V++ +VVS A   LPFQ+EDA+RPEA   +E     +VG++ RLN R +D RT ANQ I RIQ  V QLFREFL +R FVEIHTPKL+GGASESG++ FTL YFDQ   LAQSPQ YKQMACA  G E+VFE+GPVFRAE S THRH+CEF GLDLEM I EHY+EVLE+FSDLFIYIFD L  R+A EL  +N+Q+PFEPL++ +PSL +SF EGV +L+EAG +    +DL TE EK LGR+VKEKY TDFY++D++PL+VRPFYTMP P D   SNS+DM IRGEEIVSGAQR+HD +LL +R+D +GVPQE++R Y+D+FR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   39 YGELPLIQSQERPKKDYKSVKDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQAILHESDKVSRPMIKFAAGVPKESVVDVFVTLTVPDSPVLSTTQKDVELNVEKFFVVSKALPELPFQVEDAARPEALVKAEGSTYVNVGLETRLNTRPLDLRTPANQCIMRIQAAVGQLFREFLIQRDFVEIHTPKLVGGASESGANCFTLKYFDQDAALAQSPQTYKQMACAVAGLERVFEIGPVFRAENSNTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFDGLKERYAKELAIINEQYPFEPLKYNKPSLIISFEEGVKMLKEAGAEQEPEDDLSTENEKWLGRLVKEKYDTDFYILDKFPLAVRPFYTMPDPKDKRWSNSYDMMIRGEEIVSGAQRVHDPKLLMQRMDELGVPQESMRNYIDSFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 514          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|675174153|ref|XP_008895961.1| (aspartate-tRNA(Asn) ligase [Phytophthora parasitica INRA-310] >gi|568038961|gb|ETM36475.1| aspartate-tRNA(Asn) ligase [Phytophthora parasitica] >gi|568103609|gb|ETN18266.1| aspartate-tRNA(Asn) ligase [Phytophthora parasitica INRA-310] >gi|570940951|gb|ETP06208.1| aspartate-tRNA(Asn) ligase [Phytophthora parasitica CJ01A1] >gi|570971202|gb|ETP34321.1| aspartate-tRNA(Asn) ligase [Phytophthora parasitica P10297] >gi|970656367|gb|KUF94388.1| hypothetical protein AM588_10009844 [Phytophthora nicotianae])

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 288/476 (60.50%), Postives = 359/476 (75.42%), Query Frame = 0
Query:  134 YGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            YG LP++QS     + +  +  L+P   G+   +RG L   RA  K  F+ LR+  AT+QA++++   V + M+KFA  VP+ESV+D+  TLT P  PV S T + VE+ V++ +VVS A   LPFQ+EDA+RP+A   +E     +VG++ RLN R +D RT ANQ I RIQ  V QLFREFL +R FVEIHTPKL+GGASESG++ FTL YFDQ   LAQSPQ YKQMACA  G E+VFE+GPVFRAE S THRH+CEF GLDLEM I EHY+EVLE+FSDLFIYIFD L  R+A EL  +N+Q+PFEPL++ +PSL +SF EGV +L+EAG +    +DL TE EK LGR+VKEKY TDFY++D++PL+VRPFYTMP P D   SNS+DM IRGEEIVSGAQR+HD +LL +R+D +GVPQE++R Y+D+FR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   39 YGELPLIQSQERPKKDYKSVKDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQAILHESDKVSRPMIKFAAGVPKESVVDVFVTLTVPDSPVLSTTQKDVELNVEKFFVVSKALPELPFQVEDAARPDALVKAEGSTYVNVGLETRLNTRPLDLRTPANQCIMRIQAAVGQLFREFLIQRDFVEIHTPKLVGGASESGANCFTLKYFDQDAALAQSPQTYKQMACAVAGLERVFEIGPVFRAENSNTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFDGLKERYAKELAIINEQYPFEPLKYNKPSLIISFEEGVKMLKEAGAEQEPEDDLSTENEKWLGRLVKEKYDTDFYILDKFPLAVRPFYTMPDPKDKRWSNSYDMMIRGEEIVSGAQRVHDPKLLMQRMDELGVPQESMRNYIDSFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 514          
BLAST of EWM24309.1 vs. NCBI_GenBank
Match: gi|301103370|ref|XP_002900771.1| (aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4] >gi|262101526|gb|EEY59578.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 287/476 (60.29%), Postives = 359/476 (75.42%), Query Frame = 0
Query:  134 YGNLPMVQSLGMTDRVWGRIDGLSPSRAGQRVLLRGRLHTSRAVGKGVFLLLRQGIATVQAVVYQGPGVDKGMVKFAGAVPRESVIDLVGTLTEPREPVESATARLVEVQVDELYVVSAAENVLPFQLEDASRPEA---SEDPEMPSVGMDNRLNYRWIDTRTAANQAIFRIQHGVSQLFREFLSERGFVEIHTPKLLGGASESGSSVFTLTYFDQSGCLAQSPQLYKQMACACGGFEKVFEVGPVFRAEKSFTHRHLCEFTGLDLEMAIHEHYYEVLELFSDLFIYIFDNLATRFAAELQAVNKQHPFEPLQFCRPSLRLSFAEGVALLREAGYDASEMEDLDTEKEKALGRIVKEKYKTDFYMMDRYPLSVRPFYTMPCPDDPTLSNSFDMFIRGEEIVSGAQRIHDVELLGERIDAMGVPQETLRTYMDAFRHGALPHGGGGIGLERVVMLYLGLKNIRKTSLFPRDPKRLAP 606
            YG LP++QS     + +  ++ L+P   G+   +RG L   RA  K  F+ LR+  AT+Q ++++   V + M+KFA  V +ESV+D+  TL+ P  PV S T + VE+ V++ +VVS A   LPFQ+EDA+RP+A   +E     +VG++ RLN R +D RT ANQ I RIQ  VSQLFREFL +R FVEIHTPKL+GGASESG++ FTL YFDQ   LAQSPQ YKQMACA  G E+VFE+GPVFRAE S THRH+CEF GLDLEM I EHY+EVLE+FSDLFIYIFD L  R+A EL  +N+Q+PFEPL++ +PSL ++F EGV +L+EAG D    +DL TE EK LGR+VKEKY TDFY++D++PL+VRPFYTMP P D   SNS+DM IRGEEIVSGAQR+HD +LL ER+D +GVPQE++R Y+D+FR GALPHGGGGIGLERVVMLYLGL NIRK S+FPRDPKRL P
Sbjct:   39 YGELPLIQSQERPKKNYKSVEDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQGILHESDKVSRPMIKFAAGVSKESVVDVYVTLSVPDSPVVSTTQKDVELNVEKFFVVSKALPELPFQVEDAARPDALVKAEGSTYVNVGLETRLNSRPLDLRTPANQCIMRIQAAVSQLFREFLIQRNFVEIHTPKLVGGASESGANCFTLKYFDQDAALAQSPQTYKQMACAVAGLERVFEIGPVFRAENSNTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFDGLKERYAKELATINEQYPFEPLKYNKPSLIINFEEGVKMLKEAGADQEPEDDLSTENEKWLGRLVKEKYDTDFYILDKFPLAVRPFYTMPDPTDKRWSNSYDMMIRGEEIVSGAQRVHDPKLLMERMDELGVPQESMRNYIDSFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKRLFP 514          
The following BLAST results are available for this feature:
BLAST of EWM24309.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105701|gb|EWM24309.1|0.000e+0100.00aspartyl-trna synthetase [Nannochloropsis gaditana... [more]
gi|298709437|emb|CBJ31343.1|0.000e+054.74Aspartyl-tRNA Synthetase [Ectocarpus siliculosus][more]
gi|635368536|emb|CCI43251.1|0.000e+061.13unnamed protein product [Albugo candida][more]
gi|635368537|emb|CCI43252.1|0.000e+060.75unnamed protein product [Albugo candida][more]
gi|325192924|emb|CCA27311.1|0.000e+060.54aspartyltRNA synthetase putative [Albugo laibachii... [more]
gi|1072233176|gb|OEU17907.1|0.000e+048.15aspartyl-tRNA synthetase [Fragilariopsis cylindrus... [more]
gi|219120825|ref|XP_002185644.1|0.000e+058.38predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|570317134|gb|ETO65082.1|0.000e+060.71aspartate-tRNA(Asn) ligase [Phytophthora parasitic... [more]
gi|675174153|ref|XP_008895961.1|0.000e+060.50aspartate-tRNA(Asn) ligase [Phytophthora parasitic... [more]
gi|301103370|ref|XP_002900771.1|0.000e+060.29aspartyl-tRNA synthetase, putative [Phytophthora i... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6393rna6393Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications