EWM24325.1, cds6370 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|585105717|gb|EWM24325.1| (ubiquitin specific peptidase 15 [Nannochloropsis gaditana]) HSP 1 Score: 1246.88 bits (3225), Expect = 0.000e+0 Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0 Query: 1 MRAVSLEGVSKRKRSVTSFSQPCPPKLRRSRRGRHDNGPSACETPNAVSETGFQGNKTRASIKDSAARPAGCRAPQVDTTSPRPLTPTALLTSMERRSIGISGLLRASFSGNAAEFEAEAHRLCALIPAKLLSSFTSLSSAAAFSSEWTRADARGRSILHGAASSGHPTILQHVLDAKVFDIDQPAEGGLTALCYALDRRDFVGATTLLAAGANADKVESLYGFWDAAWATERMGMFGTPRADALDILRTALSQALVQNDDRCRPWLDLTTQHGLFEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRETLSVGSHVEILATAAGPMAAGSTSAAATLPSPEDPQERKWWDATAVDIQRSRRRILLSVDGRPSVTRWVDMDGREIADIGTHVKPAPPPLLPPQTLAGSLLEVQDDATGDVGASSAASISHSRGGKEPVAASPRQEEASKAANDGDLARLLALINVQDPVALRFIYFRRKLQLGMISRLNPPALGPGSLLHNGRRRRGKLGLIFHQQVEKHHDKRPKKRHVETASLEFPSCKKRRTSKLLYAELRKNVLRYVVTDLKEDLFKEFLQEYL 614 MRAVSLEGVSKRKRSVTSFSQPCPPKLRRSRRGRHDNGPSACETPNAVSETGFQGNKTRASIKDSAARPAGCRAPQVDTTSPRPLTPTALLTSMERRSIGISGLLRASFSGNAAEFEAEAHRLCALIPAKLLSSFTSLSSAAAFSSEWTRADARGRSILHGAASSGHPTILQHVLDAKVFDIDQPAEGGLTALCYALDRRDFVGATTLLAAGANADKVESLYGFWDAAWATERMGMFGTPRADALDILRTALSQALVQNDDRCRPWLDLTTQHGLFEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRETLSVGSHVEILATAAGPMAAGSTSAAATLPSPEDPQERKWWDATAVDIQRSRRRILLSVDGRPSVTRWVDMDGREIADIGTHVKPAPPPLLPPQTLAGSLLEVQDDATGDVGASSAASISHSRGGKEPVAASPRQEEASKAANDGDLARLLALINVQDPVALRFIYFRRKLQLGMISRLNPPALGPGSLLHNGRRRRGKLGLIFHQQVEKHHDKRPKKRHVETASLEFPSCKKRRTSKLLYAELRKNVLRYVVTDLKEDLFKEFLQEYL Sbjct: 1 MRAVSLEGVSKRKRSVTSFSQPCPPKLRRSRRGRHDNGPSACETPNAVSETGFQGNKTRASIKDSAARPAGCRAPQVDTTSPRPLTPTALLTSMERRSIGISGLLRASFSGNAAEFEAEAHRLCALIPAKLLSSFTSLSSAAAFSSEWTRADARGRSILHGAASSGHPTILQHVLDAKVFDIDQPAEGGLTALCYALDRRDFVGATTLLAAGANADKVESLYGFWDAAWATERMGMFGTPRADALDILRTALSQALVQNDDRCRPWLDLTTQHGLFEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRETLSVGSHVEILATAAGPMAAGSTSAAATLPSPEDPQERKWWDATAVDIQRSRRRILLSVDGRPSVTRWVDMDGREIADIGTHVKPAPPPLLPPQTLAGSLLEVQDDATGDVGASSAASISHSRGGKEPVAASPRQEEASKAANDGDLARLLALINVQDPVALRFIYFRRKLQLGMISRLNPPALGPGSLLHNGRRRRGKLGLIFHQQVEKHHDKRPKKRHVETASLEFPSCKKRRTSKLLYAELRKNVLRYVVTDLKEDLFKEFLQEYL 614
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|695419716|ref|XP_009527736.1| (hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae] >gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]) HSP 1 Score: 69.3218 bits (168), Expect = 1.432e-8 Identity = 51/169 (30.18%), Postives = 73/169 (43.20%), Query Frame = 0 Query: 269 LTTQHGLF------EEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRETLSVGSHVEILATAAGPMAAGSTSAAATLPSPEDPQERKWWDATAVDIQRSRR----RILLSVDGRPSVTRWVDMDGREIADIGTH 427 L +HG F E W+ +L+ +DA D D +WYEA V+ + V+V Y W ++DE L+ S R+ P ++ VP WR VG V + G P +W D+++S RI L VDG RWVD + +GTH Sbjct: 342 LDWRHGKFYSEVQAEAWRFTLEKNQLIDALDTDKKWYEARVIDLSDTQVKVHYRGWTAKWDEWLTRTSARIAPLHTKVPNWR-AFKVGDEVLV----------GKEVDRKNYP--------EWRIGRVTDLKKSEMHDSLRIELDVDGS---KRWVDAQNELLCPVGTH 488
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|695419769|ref|XP_009527751.1| (hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae] >gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]) HSP 1 Score: 68.9366 bits (167), Expect = 1.961e-8 Identity = 51/169 (30.18%), Postives = 73/169 (43.20%), Query Frame = 0 Query: 269 LTTQHGLF------EEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRETLSVGSHVEILATAAGPMAAGSTSAAATLPSPEDPQERKWWDATAVDIQRSRR----RILLSVDGRPSVTRWVDMDGREIADIGTH 427 L +HG F E W+ +L+ +DA D D +WYEA V+ + V+V Y W ++DE L+ S R+ P ++ VP WR VG V + G P +W D+++S RI L VDG RWVD + +GTH Sbjct: 298 LDWRHGKFYSEVQAEAWRFTLEKNQLIDALDTDKKWYEARVIDLSDTQVKVHYRGWTAKWDEWLTRTSARIAPLHTKVPNWR-AFKVGDEVLV----------GKEVDRKNYP--------EWRIGRVTDLKKSEMHDSLRIELDVDGS---KRWVDAQNELLCPVGTH 444
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|675213621|ref|XP_008915695.1| (hypothetical protein PPTG_19039 [Phytophthora parasitica INRA-310] >gi|568084081|gb|ETM99025.1| hypothetical protein PPTG_19039 [Phytophthora parasitica INRA-310] >gi|570941910|gb|ETP07167.1| hypothetical protein F441_16520 [Phytophthora parasitica CJ01A1] >gi|970664958|gb|KUG01740.1| hypothetical protein AM587_10011869 [Phytophthora nicotianae]) HSP 1 Score: 65.855 bits (159), Expect = 5.170e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|570318113|gb|ETO66061.1| (hypothetical protein F444_16689 [Phytophthora parasitica P1976]) HSP 1 Score: 65.855 bits (159), Expect = 5.217e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|568039950|gb|ETM37424.1| (hypothetical protein L914_16029 [Phytophthora parasitica]) HSP 1 Score: 65.855 bits (159), Expect = 5.362e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|567951836|gb|ETK77527.1| (hypothetical protein L915_16216 [Phytophthora parasitica] >gi|567980523|gb|ETL30983.1| hypothetical protein L916_16109 [Phytophthora parasitica]) HSP 1 Score: 65.855 bits (159), Expect = 5.362e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|570996497|gb|ETP53088.1| (hypothetical protein F442_01991 [Phytophthora parasitica P10297]) HSP 1 Score: 65.4698 bits (158), Expect = 5.767e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|568010049|gb|ETL84242.1| (hypothetical protein L917_15908 [Phytophthora parasitica]) HSP 1 Score: 65.4698 bits (158), Expect = 5.820e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 139 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 208
BLAST of EWM24325.1 vs. NCBI_GenBank
Match: gi|568039937|gb|ETM37411.1| (hypothetical protein L914_16030, partial [Phytophthora parasitica]) HSP 1 Score: 65.855 bits (159), Expect = 6.288e-8 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 276 FEEWKASLKVGSRVDARDCDYRWYEAEVVGTFERGVRVSYLSWGRRFDEDLSLDSLRVLPAYSVVPAWRE 345 E+W++ LK+ VDA D D RWYEA++V + V+V Y W ++DE L+ S R++P +S VP WR+ Sbjct: 155 LEQWRSELKLDQSVDALDTDSRWYEAKIVDITDSRVKVHYRGWSVKWDEWLAKTSPRLMPTHSRVPNWRK 224 The following BLAST results are available for this feature:
BLAST of EWM24325.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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