EWM24315.1, cds6369 (CDS) Nannochloropsis gaditana

Overview
NameEWM24315.1
Unique Namecds6369
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:396641..396764 +
Alignment locationCM002468.1:396945..398182 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24315.1
Productexodeoxyribonuclease iii
Orig transcript idgnl|cribi|Naga_100047g27.6078.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:396641..396764 +
CM002468.1supercontigCM002468.1:396945..398182 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
GO:0003677DNA binding
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR020848AP_endonuclease_F1_CS
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|585105707|gb|EWM24315.1| (exodeoxyribonuclease iii [Nannochloropsis gaditana])

HSP 1 Score: 942.569 bits (2435), Expect = 0.000e+0
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query:    1 MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELEHEKLGKEGSRNKVNNASDRKEGAGQRVEPLPEQKAVLAAFSPLPPSVKDAIEGRTIFRKILPDPKQPSIKGFFASTRTPSVVSNTKGQSAGSVESSSGPEGAASKASLFPAATVTEKLCTCEAECDSKRLAKNENVKEAMSIASNKKRQPLKSDKGQLSKYLKFSPDL 453
            MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELEHEKLGKEGSRNKVNNASDRKEGAGQRVEPLPEQKAVLAAFSPLPPSVKDAIEGRTIFRKILPDPKQPSIKGFFASTRTPSVVSNTKGQSAGSVESSSGPEGAASKASLFPAATVTEKLCTCEAECDSKRLAKNENVKEAMSIASNKKRQPLKSDKGQLSKYLKFSPDL
Sbjct:    1 MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELEHEKLGKEGSRNKVNNASDRKEGAGQRVEPLPEQKAVLAAFSPLPPSVKDAIEGRTIFRKILPDPKQPSIKGFFASTRTPSVVSNTKGQSAGSVESSSGPEGAASKASLFPAATVTEKLCTCEAECDSKRLAKNENVKEAMSIASNKKRQPLKSDKGQLSKYLKFSPDL 453          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|302837660|ref|XP_002950389.1| (hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis] >gi|300264394|gb|EFJ48590.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis])

HSP 1 Score: 166.007 bits (419), Expect = 1.231e-40
Identity = 104/287 (36.24%), Postives = 153/287 (53.31%), Query Frame = 0
Query:    1 MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQT-PGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKG-RPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELE 285
            ++ I+ WN+  L      +E    S   F++ L +DI CFQE KL  A+IT++ A        + ++WA   + PGY GV T+C+           D    ++  +  +  EGR V+TDHG FVL NVY PNAG +  R R+ +K  FL AL  KM+E   + GR+V+L GDLN+ A+ + D+H         D++    L  L+    Y D +R LHPD + +YT +D   T+ R  N G RIDY+LVS  P   P + + EILT      K SDH  +++ L ++
Sbjct:   18 VLNIMCWNINCLTPTVRNMELRHKSFRGFMDHLQLDIACFQEVKLPAARITRELACVE----GFQSFWASSTSKPGYSGVTTWCRTATAAPRDAAVDCLGGDERPE--LDTEGRFVLTDHGAFVLLNVYVPNAGDRPERARLPYKLAFLRALRTKMDEL-TALGRQVVLVGDLNIAAERR-DVHPTLDFDSMYDKQELAELSGLIA--AYPDVWRHLHPDTEGSYTVWDER-TSARAFNTGLRIDYVLVS--PGLLPYVQSCEILTAAAIPPKWSDHAAILLTLRVQ 291          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|818252912|gb|KKP39574.1| (exodeoxyribonuclease III Xth2, exodeoxyribonuclease III [Candidatus Peregrinibacteria bacterium GW2011_GWF2_33_10] >gi|1083927065|gb|OGJ45068.1| exodeoxyribonuclease III [Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_33_21] >gi|1083928116|gb|OGJ46061.1| exodeoxyribonuclease III [Candidatus Peregrinibacteria bacterium RIFOXYA12_FULL_33_12] >gi|1083933230|gb|OGJ50848.1| exodeoxyribonuclease III [Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_33_20])

HSP 1 Score: 154.836 bits (390), Expect = 2.288e-40
Identity = 106/286 (37.06%), Postives = 158/286 (55.24%), Query Frame = 0
Query:    2 VKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMH--EEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELE 285
            +KIISWNV  + A+      +K     FLED   DI+  QE K   ++  K     L P G ++ Y+   + PGY GVA + K +Q L++     +  E DE       EGR +  D GDF+LFNVY PN GG G  R++FK  F +   + + + + S+G+ +I+ GD N  A  + D+   +E  S  G     RHW+ + L  G  VD FR +HPD+K+AYT++ +  T  R  N G+RIDY L++S     PR+  AEIL+ V+     SDH P+++E+E++
Sbjct:    1 MKIISWNVNGIRAIS-----KKREFWDFLEDFSPDILALQEVK---SEKYKLSMDILQPPGGYFAYFNCAKRPGYSGVAIYSK-KQILNISQTIGI-KEFDE-------EGRFMEIDFGDFILFNVYFPN-GGSGELRLKFKLDFYDKFLQHILDLK-SQGKGIIVGGDFN-TAHTEIDLARPKENESISGFMPIERHWVDKYLRHGL-VDIFRQIHPDKKNAYTWW-SMRTAARVRNIGWRIDYFLITS--DLMPRIKQAEILSEVI----GSDHCPILLEIEMD 258          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|971519435|dbj|GAQ78726.1| (putative endonuclease/exonuclease/phosphatase family protein [Klebsormidium nitens])

HSP 1 Score: 154.836 bits (390), Expect = 4.623e-38
Identity = 111/286 (38.81%), Postives = 151/286 (52.80%), Query Frame = 0
Query:    2 VKIISWNVASLPALQGFIEHEKGSM-NRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTP-GYCGVATFCK-AEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKG-RPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELE 283
            + I+SWNV  LP       +  GS+ N F + L  DI+CFQE K+   ++ K  A   VP   + ++WA  Q   GY GV T+ K    PL    D  L       +  I++EGR+++TDHG FVLFN+Y PNAG K  RPR++FK +FL AL  K +E  V+ GR VI+ GDLN V+   AD+H  F            W    L E  YVD++R LHPD  D +T + N   + R  N+G RID+ +         +L+ AEIL       K SDH  V + L+
Sbjct:    1 MHIVSWNVNGLPTTLKEASYHHGSVENYFAQVLKADIVCFQEAKVREDRLEKWLA--CVPG--YESFWAFSQNKKGYSGVVTYVKEGFSPLDAAADC-LPGGGGGGEDDITQEGRVMMTDHGAFVLFNIYVPNAGEKPLRPRLDFKMKFLNALRAKCDEL-VASGRHVIVVGDLN-VSHTTADIHSCFGLHKVYAPEELAWTDSFLSE--YVDAWRHLHPDVSDGFTCW-NQKKSARLFNEGARIDFTVCDKGFKG--QLVGAEILDT---PDKWSDHTAVSLTLK 271          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|916824467|ref|WP_051431523.1| (exodeoxyribonuclease III [Bdellovibrio bacteriovorus])

HSP 1 Score: 145.976 bits (367), Expect = 5.526e-37
Identity = 101/285 (35.44%), Postives = 153/285 (53.68%), Query Frame = 0
Query:    2 VKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHE--EFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELEL 284
            +KIISWNV  + A      ++KG M+ F++    DI C QETK  + Q+  +  +    +    +YW+     GY GVATF   + PL +    D  AE +        EGR+V+TDHG+F L+N+Y PN GG G  R  FK +FL+ L + +E  +++ GR+VI+ GD N VA    D+H+        G     R W    L  G ++D+FR  HP  ++ ++++D Y    R  N+G+RIDY+ VS        L++A++L  V    + SDH PV+V L+ 
Sbjct:   11 LKIISWNVNGIRAC-----YKKGLMD-FVKSQAPDIFCVQETKAHIDQVEVEVKNLGYKN----SYWSSAMKKGYSGVATFTNLD-PLKIEFQFDNIAEYES-------EGRIVMTDHGEFDLYNIYFPN-GGSGLERHNFKQQFLKDLNKHLEA-KLATGRQVIVVGDYN-VAHENIDVHDPIRLSKESGFLPEERAWFDSFLDLG-FIDTFRYFHPQAQERFSWWD-YRKLARISNRGWRIDYVCVSKGLE--KNLVSADVLDQV----EGSDHCPVLVNLKF 266          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|578018841|gb|AHI07103.1| (exodeoxyribonuclease III [Bdellovibrio bacteriovorus W])

HSP 1 Score: 145.206 bits (365), Expect = 1.189e-36
Identity = 101/285 (35.44%), Postives = 153/285 (53.68%), Query Frame = 0
Query:    2 VKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHE--EFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELEL 284
            +KIISWNV  + A      ++KG M+ F++    DI C QETK  + Q+  +  +    +    +YW+     GY GVATF   + PL +    D  AE +        EGR+V+TDHG+F L+N+Y PN GG G  R  FK +FL+ L + +E  +++ GR+VI+ GD N VA    D+H+        G     R W    L  G ++D+FR  HP  ++ ++++D Y    R  N+G+RIDY+ VS        L++A++L  V    + SDH PV+V L+ 
Sbjct:   21 LKIISWNVNGIRAC-----YKKGLMD-FVKSQAPDIFCVQETKAHIDQVEVEVKNLGYKN----SYWSSAMKKGYSGVATFTNLD-PLKIEFQFDNIAEYES-------EGRIVMTDHGEFDLYNIYFPN-GGSGLERHNFKQQFLKDLNKHLEA-KLATGRQVIVVGDYN-VAHENIDVHDPIRLSKESGFLPEERAWFDSFLDLG-FIDTFRYFHPQAQERFSWWD-YRKLARISNRGWRIDYVCVSKGLE--KNLVSADVLDQV----EGSDHCPVLVNLKF 276          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|1041169234|emb|CUS05269.2| (Exodeoxyribonuclease [Ardenticatena])

HSP 1 Score: 143.665 bits (361), Expect = 3.690e-36
Identity = 105/289 (36.33%), Postives = 149/289 (51.56%), Query Frame = 0
Query:    1 MVKIISWNVASLPALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMH--EEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELELEHE 287
            M+ + SWNV  L A+     H KG    +L     DI+C QETK    Q+++     L P G ++TYWAV + PGY GVA +CK + PLSV     L            +EGR +V D GDF L N Y PN G +   R+ FK ++       +E  R   G+ VI  GD+N  A    D+    +  +A G     R W+ R++  G Y+D++R+L+PD   AYT++   VT  R  N G+R+DY  +S  P   PR++ A I  +VL     SDH PV + L +E +
Sbjct:    1 MLTLYSWNVNGLRAV-----HRKGIFLDWLARTQPDILCLQETKCRPDQLSE---DVLHPPG-YYTYWAVSERPGYSGVALYCK-QPPLSVQVGLGL--------PDFDREGRTLVADFGDFTLVNAYFPN-GSRDHSRLPFKMQYNADFLDTIENLRQG-GQSVIFCGDVN-TAHQPIDLARPRQNMNATGFMPIEREWIDRVVERG-YLDTYRTLYPDTTGAYTWWAQ-VTFSRQKNVGWRLDYFFIS--PDLRPRVMDAAIHPDVL----GSDHCPVSLTLAIETD 260          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|760450489|ref|XP_011402313.1| (DNA-(apurinic or apyrimidinic site) lyase 2 [Auxenochlorella protothecoides] >gi|675356820|gb|KFM29260.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Auxenochlorella protothecoides])

HSP 1 Score: 144.436 bits (363), Expect = 6.595e-36
Identity = 114/306 (37.25%), Postives = 156/306 (50.98%), Query Frame = 0
Query:   19 IEHEKGSMNRFLEDLCVDIMCFQ--------------ETKLSVAQITKKQASFLVPDGKWWTYWAVG-QTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGK-GRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEG--TYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELE----------LEHEKLGKEGSRN 296
            I  + GS++    +L +DI CFQ              ETKL  AQ+TK+     V D +  +YWAV  +  GY GV T+ +  Q  + + + D  A     +  I +EGR+VV+DHG FVL NVY PNAG +  RPR+ FK +FL AL R  + FR  +GR+VIL GD N+VA   AD+H      D         L   L EG   YVD +R LH    D YT +D   T+ R  N+G RIDY+L +  P   P ++A E++       K SDH  +++ L+          L  EKL   G R+
Sbjct:    9 IALKYGSLSDLFGELELDIACFQVLVLVMVVVQINDRETKLVEAQLTKEIVC--VDDCE--SYWAVSREKKGYSGVVTYARG-QWRAAHVEVDCLAS---GESDIDREGRVVVSDHGAFVLINVYVPNAGDRPARPRLGFKLKFLHALKRTADGFR-KQGRQVILVGDFNVVA-TPADVHASMPFDDLYAPEELAAL-HALTEGPAAYVDVWRRLHLGVADVYTVWDER-TSARAFNRGLRIDYVLCT--PGLLPSVVACEVVGTDRLPPKWSDHAGLLLRLQGLAAPRPRPALRAEKLRPPGQRS 300          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|168008755|ref|XP_001757072.1| (predicted protein [Physcomitrella patens] >gi|162691943|gb|EDQ78303.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 148.288 bits (373), Expect = 1.509e-35
Identity = 101/288 (35.07%), Postives = 150/288 (52.08%), Query Frame = 0
Query:    2 VKIISWNVASL-PALQGFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVG-QTPGYCGVATFCK-AEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNA--GGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMHEEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKA-SDHVPVMVELE 283
            ++I SWNV  L   L+        + N F + L  DI+CFQE K+   ++ K  A     DG + ++WA   +  GY GV T+ K A  PL     AD   E   A+  +  EGRL+ TDHG FVL NVY PN+  G KGRPR++FK R+L+AL +  ++  V  G+ +++ GD N VA    D+H  +   +      R WL   L    Y+D +R  HPD K+ ++ +D   +  R  N+G RIDY + +         L   + T++++  K  SDH  V+V L+
Sbjct:   82 MRIFSWNVNGLRTTLKDVAACHTSASNYFCQVLNADIVCFQEAKIQEEKLEKWIACV---DG-YHSHWAFSREKKGYSGVVTYVKEALSPLDA--KADWLGENSSAED-LCNEGRLMCTDHGSFVLLNVYVPNSGDGDKGRPRLDFKMRYLKALEQTCDDL-VRSGKHIVIVGDFN-VAHKDIDVHSRWKVEEIYSLEEREWLDGFL--SRYIDLYRHFHPDEKNIFSVWDQK-SDARTRNEGLRIDYAICNEG------FLTEVLETDIVKMQKQWSDHAAVVVTLK 351          
BLAST of EWM24315.1 vs. NCBI_GenBank
Match: gi|1083737847|gb|OGI20424.1| (exodeoxyribonuclease III [Candidatus Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12])

HSP 1 Score: 141.739 bits (356), Expect = 1.666e-35
Identity = 96/287 (33.45%), Postives = 161/287 (56.10%), Query Frame = 0
Query:    2 VKIISWNVASLPALQ--GFIEHEKGSMNRFLEDLCVDIMCFQETKLSVAQITKKQASFLVPDGKWWTYWAVGQTPGYCGVATFCKAEQPLSVYTDADLFAEEDEAQHCISKEGRLVVTDHGDFVLFNVYCPNAGGKGRPRIEFKARFLEALWRKMEEFRVSRGRRVILAGDLNLVADMKADMH--EEFWSADGVDERTRHWLPRLLCEGTYVDSFRSLHPDRKDAYTFFDNYVTTRRGLNQGYRIDYILVSSAPSTGPRLLAAEILTNVLRTSKASDHVPVMVELEL 284
            +K+ISWNV  + A Q  GF+E        +L     DI+C QETK  + Q+  +    + PDG + ++W+ G+  GY GVATF K E P  + +   +       + C S EGR+++TD+ DF+LFN+Y PN G + + R+ +K  F +   + +++ +  +G+++I+ GD+N  A  + D+   +E  +  G     R W+ +L+  G Y+D+FR  + D    YT++D  +T  R  N G+RIDY  +S  P+    L +A I+++V+     SDH P+ +E+EL
Sbjct:    4 LKLISWNVNGIRAQQKKGFVE--------WLTKTSPDILCVQETKAHIEQLNNE---LINPDG-YKSFWSSGEKKGYSGVATFTKKE-PKKIESGLGV-------KKCDS-EGRILITDYDDFILFNIYFPN-GQRDQERLNYKMGFYDEFLKYIDDLK-EKGKKIIVCGDVN-TAHKEIDLARPKENINTSGFLPIERKWMDKLVEHG-YIDTFREFNKD-SGHYTYWDQ-ITRARERNVGWRIDYFFIS--PNLRKNLKSAFIMSDVM----GSDHCPLGIEIEL 257          
The following BLAST results are available for this feature:
BLAST of EWM24315.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105707|gb|EWM24315.1|0.000e+0100.00exodeoxyribonuclease iii [Nannochloropsis gaditana... [more]
gi|302837660|ref|XP_002950389.1|1.231e-4036.24hypothetical protein VOLCADRAFT_104648 [Volvox car... [more]
gi|818252912|gb|KKP39574.1|2.288e-4037.06exodeoxyribonuclease III Xth2, exodeoxyribonucleas... [more]
gi|971519435|dbj|GAQ78726.1|4.623e-3838.81putative endonuclease/exonuclease/phosphatase fami... [more]
gi|916824467|ref|WP_051431523.1|5.526e-3735.44exodeoxyribonuclease III [Bdellovibrio bacteriovor... [more]
gi|578018841|gb|AHI07103.1|1.189e-3635.44exodeoxyribonuclease III [Bdellovibrio bacteriovor... [more]
gi|1041169234|emb|CUS05269.2|3.690e-3636.33Exodeoxyribonuclease [Ardenticatena][more]
gi|760450489|ref|XP_011402313.1|6.595e-3637.25DNA-(apurinic or apyrimidinic site) lyase 2 [Auxen... [more]
gi|168008755|ref|XP_001757072.1|1.509e-3535.07predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1083737847|gb|OGI20424.1|1.666e-3533.45exodeoxyribonuclease III [Candidatus Melainabacter... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6384rna6384Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications