EWM24321.1, cds6367 (CDS) Nannochloropsis gaditana

Overview
NameEWM24321.1
Unique Namecds6367
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:391300..392088 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24321.1
Producthypoxanthine phosphoribosyltransferase 1
Orig transcript idgnl|cribi|Naga_100047g25.6084.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:391300..392088 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009116nucleoside metabolic process
GO:0006166purine ribonucleoside salvage
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0004422hypoxanthine phosphoribosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR000836PRibTrfase_dom
IPR029057PRTase-like
IPR005904Hxn_phspho_trans
Homology
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|585105713|gb|EWM24321.1| (hypoxanthine phosphoribosyltransferase 1 [Nannochloropsis gaditana])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query:    1 MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA
Sbjct:    1 MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|953502737|emb|CEG50452.1| (hypoxanthine phosphoribosyltransferase [Plasmopara halstedii])

HSP 1 Score: 239.195 bits (609), Expect = 4.656e-76
Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            + FLIP  Y D++  VLIP GLI+DRV KLA +I   Y  KT+HL+C+LKGGS+FF  L   L     + + N     F+FDF+RVKSYEGT+STG VQI+G D+   +G+ LLL+ED+IDSG TM++LVP + K   P SVRVA+L+EKR   +CGF AD+V F+IPD FV+GY LDYNE FRD+ HIC+INE+GI K+ TN+
Sbjct:   22 TQFLIPHHYLDSIESVLIPKGLIEDRVEKLAQNIRDAYEGKTIHLVCILKGGSAFFHALVNQLRLYHKYNKCNYV--PFTFDFIRVKSYEGTKSTGDVQISGADLAKFKGKSLLLIEDIIDSGKTMAKLVPLL-KQYEPESVRVASLLEKRNPDNCGFVADFVGFNIPDKFVIGYCLDYNEMFRDLDHICIINEVGITKYATNS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|695425116|ref|XP_009529098.1| (hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae] >gi|348675531|gb|EGZ15349.1| hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae])

HSP 1 Score: 238.81 bits (608), Expect = 6.971e-76
Identity = 115/204 (56.37%), Postives = 150/204 (73.53%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            + FL+P  Y D++  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP + +  AP SVRVA+L+EKR   SCGF+AD+V F+IPD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:   22 AQFLVPHHYLDSIDSVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVDKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPMLHE-YAPESVRVASLLEKRNPESCGFQADFVGFNIPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|566016375|gb|ETI39286.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1569] >gi|567953861|gb|ETK79504.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|567982505|gb|ETL32923.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|568041984|gb|ETM39345.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|570320108|gb|ETO68056.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570943951|gb|ETP09208.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 238.039 bits (606), Expect = 1.298e-75
Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            S FLIP  Y D+V  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP +     P SVRVA+L+EKR   SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:   22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|568012009|gb|ETL86187.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica])

HSP 1 Score: 238.039 bits (606), Expect = 1.386e-75
Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            S FLIP  Y D+V  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP +     P SVRVA+L+EKR   SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:   22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|675203895|ref|XP_008910832.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310] >gi|568089043|gb|ETN03895.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310])

HSP 1 Score: 237.654 bits (605), Expect = 2.364e-75
Identity = 116/202 (57.43%), Postives = 146/202 (72.28%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKT 260
            S FLIP  Y D+V  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP +     P SVRVA+L+EKR   SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +
Sbjct:   22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYAS 220          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|970665397|gb|KUG02064.1| (Hypoxanthine-guanine phosphoribosyltransferase [Phytophthora nicotianae])

HSP 1 Score: 236.498 bits (602), Expect = 6.661e-75
Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            S FLIP  Y D+V  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP +     P SVRVA+L+EKR   SCGF+ D+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:   22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQTDFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|301096394|ref|XP_002897294.1| (hypoxanthine-guanine phosphoribosyltransferase, putative [Phytophthora infestans T30-4] >gi|262107178|gb|EEY65230.1| hypoxanthine-guanine phosphoribosyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 237.654 bits (605), Expect = 2.753e-74
Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            + FLIP  Y D+V  VLIP GL++DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G+ LLLVED+ID+G TM++LVP + K   PASVRVA+L+EKR   SCGF+AD+V F+IPD FV+G  LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:  107 AQFLIPHHYLDSVKSVLIPKGLVEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKDLLLVEDIIDTGKTMAKLVPML-KEYEPASVRVASLLEKRNPESCGFQADFVGFNIPDQFVIGNCLDYNEIFRDLDHICIINEAGIAKYTSSS 307          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|570975052|gb|ETP37260.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 234.187 bits (596), Expect = 4.689e-74
Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 0
Query:   59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
            S FLI   Y D+V  VLIP GLI+DRV KLA DI   Y  KT+HLLCVLKGGS+FF  L   L     H+        F+FDF+RVKSYEGT+STG VQ++G D+   +G++LLLVED+ID+G TM++LVP +     P SVRVA+L+EKR   SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct:   22 SQFLILHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222          
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|298708407|emb|CBJ48470.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 231.106 bits (588), Expect = 1.414e-72
Identity = 118/231 (51.08%), Postives = 156/231 (67.53%), Query Frame = 0
Query:   35 RRTGIIRIPDEGEGESSDAPFL-------PVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKF 258
            RR   +R+   G+  S   PF+       P+  F +P  Y+  V  ++IPHGL+ DR+ KLA DI  +YAD T+HLLCVLKGGS++F +L TAL     H   + +   F+FDF++VKSY+G  STG VQITG D+  L G+++L+VED+ID+GLTM  L+P +E   A  SVRV +L+EKRT  S GF+  YV F IPD FVVGY LD+NE FRDM HICVI++ GIE+F
Sbjct:    8 RRARNVRLA-SGDAFSRRDPFVIGDQLSFPLDMFSVPHHYKGDVKEIMIPHGLVIDRIQKLAKDIRHDYADTTIHLLCVLKGGSAYFQDLITALRRFHDH--ADHSYVPFTFDFIKVKSYKGVSSTGSVQITGGDLAALEGKNVLVVEDIIDTGLTMESLLPVLEARGA-NSVRVTSLLEKRTELSSGFRGHYVGFSIPDKFVVGYCLDFNEFFRDMDHICVISDRGIERF 234          
The following BLAST results are available for this feature:
BLAST of EWM24321.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105713|gb|EWM24321.1|0.000e+0100.00hypoxanthine phosphoribosyltransferase 1 [Nannochl... [more]
gi|953502737|emb|CEG50452.1|4.656e-7656.37hypoxanthine phosphoribosyltransferase [Plasmopara... [more]
gi|695425116|ref|XP_009529098.1|6.971e-7656.37hypothetical protein PHYSODRAFT_354768 [Phytophtho... [more]
gi|566016375|gb|ETI39286.1|1.298e-7556.86hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|568012009|gb|ETL86187.1|1.386e-7556.86hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|675203895|ref|XP_008910832.1|2.364e-7557.43hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|970665397|gb|KUG02064.1|6.661e-7556.37Hypoxanthine-guanine phosphoribosyltransferase [Ph... [more]
gi|301096394|ref|XP_002897294.1|2.753e-7456.86hypoxanthine-guanine phosphoribosyltransferase, pu... [more]
gi|570975052|gb|ETP37260.1|4.689e-7456.37hypoxanthine phosphoribosyltransferase [Phytophtho... [more]
gi|298708407|emb|CBJ48470.1|1.414e-7251.08conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6382rna6382Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications