EWM24321.1, cds6367 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|585105713|gb|EWM24321.1| (hypoxanthine phosphoribosyltransferase 1 [Nannochloropsis gaditana]) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query: 1 MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA
Sbjct: 1 MSGKDAVGVTKSGNPSAGTSAHAISDNSSPIVSTRRTGIIRIPDEGEGESSDAPFLPVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|953502737|emb|CEG50452.1| (hypoxanthine phosphoribosyltransferase [Plasmopara halstedii]) HSP 1 Score: 239.195 bits (609), Expect = 4.656e-76 Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
+ FLIP Y D++ VLIP GLI+DRV KLA +I Y KT+HL+C+LKGGS+FF L L + + N F+FDF+RVKSYEGT+STG VQI+G D+ +G+ LLL+ED+IDSG TM++LVP + K P SVRVA+L+EKR +CGF AD+V F+IPD FV+GY LDYNE FRD+ HIC+INE+GI K+ TN+
Sbjct: 22 TQFLIPHHYLDSIESVLIPKGLIEDRVEKLAQNIRDAYEGKTIHLVCILKGGSAFFHALVNQLRLYHKYNKCNYV--PFTFDFIRVKSYEGTKSTGDVQISGADLAKFKGKSLLLIEDIIDSGKTMAKLVPLL-KQYEPESVRVASLLEKRNPDNCGFVADFVGFNIPDKFVIGYCLDYNEMFRDLDHICIINEVGITKYATNS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|695425116|ref|XP_009529098.1| (hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae] >gi|348675531|gb|EGZ15349.1| hypothetical protein PHYSODRAFT_354768 [Phytophthora sojae]) HSP 1 Score: 238.81 bits (608), Expect = 6.971e-76 Identity = 115/204 (56.37%), Postives = 150/204 (73.53%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
+ FL+P Y D++ VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + + AP SVRVA+L+EKR SCGF+AD+V F+IPD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 22 AQFLVPHHYLDSIDSVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVDKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPMLHE-YAPESVRVASLLEKRNPESCGFQADFVGFNIPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|566016375|gb|ETI39286.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1569] >gi|567953861|gb|ETK79504.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|567982505|gb|ETL32923.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|568041984|gb|ETM39345.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica] >gi|570320108|gb|ETO68056.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570943951|gb|ETP09208.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 238.039 bits (606), Expect = 1.298e-75 Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
S FLIP Y D+V VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + P SVRVA+L+EKR SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|568012009|gb|ETL86187.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica]) HSP 1 Score: 238.039 bits (606), Expect = 1.386e-75 Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
S FLIP Y D+V VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + P SVRVA+L+EKR SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|675203895|ref|XP_008910832.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310] >gi|568089043|gb|ETN03895.1| hypoxanthine phosphoribosyltransferase [Phytophthora parasitica INRA-310]) HSP 1 Score: 237.654 bits (605), Expect = 2.364e-75 Identity = 116/202 (57.43%), Postives = 146/202 (72.28%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKT 260
S FLIP Y D+V VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + P SVRVA+L+EKR SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +
Sbjct: 22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYAS 220
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|970665397|gb|KUG02064.1| (Hypoxanthine-guanine phosphoribosyltransferase [Phytophthora nicotianae]) HSP 1 Score: 236.498 bits (602), Expect = 6.661e-75 Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
S FLIP Y D+V VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + P SVRVA+L+EKR SCGF+ D+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 22 SQFLIPHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQTDFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|301096394|ref|XP_002897294.1| (hypoxanthine-guanine phosphoribosyltransferase, putative [Phytophthora infestans T30-4] >gi|262107178|gb|EEY65230.1| hypoxanthine-guanine phosphoribosyltransferase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 237.654 bits (605), Expect = 2.753e-74 Identity = 116/204 (56.86%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
+ FLIP Y D+V VLIP GL++DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G+ LLLVED+ID+G TM++LVP + K PASVRVA+L+EKR SCGF+AD+V F+IPD FV+G LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 107 AQFLIPHHYLDSVKSVLIPKGLVEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKDLLLVEDIIDTGKTMAKLVPML-KEYEPASVRVASLLEKRNPESCGFQADFVGFNIPDQFVIGNCLDYNEIFRDLDHICIINEAGIAKYTSSS 307
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|570975052|gb|ETP37260.1| (hypoxanthine phosphoribosyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 234.187 bits (596), Expect = 4.689e-74 Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 0
Query: 59 SSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKFKTNA 262
S FLI Y D+V VLIP GLI+DRV KLA DI Y KT+HLLCVLKGGS+FF L L H+ F+FDF+RVKSYEGT+STG VQ++G D+ +G++LLLVED+ID+G TM++LVP + P SVRVA+L+EKR SCGF+AD+V F++PD FV+GY LDYNE FRD+ HIC+INE GI K+ +++
Sbjct: 22 SQFLILHHYLDSVESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVEKLRLF--HKYNKCDYVPFTFDFIRVKSYEGTKSTGNVQVSGADLAKFKGKNLLLVEDIIDTGKTMAKLVPML-MEYEPESVRVASLLEKRNPESCGFQADFVGFNVPDKFVIGYCLDYNEIFRDLDHICIINEAGIAKYASSS 222
BLAST of EWM24321.1 vs. NCBI_GenBank
Match: gi|298708407|emb|CBJ48470.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 231.106 bits (588), Expect = 1.414e-72 Identity = 118/231 (51.08%), Postives = 156/231 (67.53%), Query Frame = 0
Query: 35 RRTGIIRIPDEGEGESSDAPFL-------PVSSFLIPPQYQDAVSHVLIPHGLIQDRVHKLAFDINQEYADKTLHLLCVLKGGSSFFWELQTALINLSSHRRTNTAKFQFSFDFVRVKSYEGTESTGKVQITGTDMKNLRGRHLLLVEDLIDSGLTMSQLVPYIEKNAAPASVRVAALMEKRTHRSCGFKADYVAFDIPDLFVVGYSLDYNEAFRDMLHICVINELGIEKF 258
RR +R+ G+ S PF+ P+ F +P Y+ V ++IPHGL+ DR+ KLA DI +YAD T+HLLCVLKGGS++F +L TAL H + + F+FDF++VKSY+G STG VQITG D+ L G+++L+VED+ID+GLTM L+P +E A SVRV +L+EKRT S GF+ YV F IPD FVVGY LD+NE FRDM HICVI++ GIE+F
Sbjct: 8 RRARNVRLA-SGDAFSRRDPFVIGDQLSFPLDMFSVPHHYKGDVKEIMIPHGLVIDRIQKLAKDIRHDYADTTIHLLCVLKGGSAYFQDLITALRRFHDH--ADHSYVPFTFDFIKVKSYKGVSSTGSVQITGGDLAALEGKNVLVVEDIIDTGLTMESLLPVLEARGA-NSVRVTSLLEKRTELSSGFRGHYVGFSIPDKFVVGYCLDFNEFFRDMDHICVISDRGIERF 234 The following BLAST results are available for this feature:
BLAST of EWM24321.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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