EWM24313.1, cds6365 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|585105705|gb|EWM24313.1| (ubiquitin-conjugating enzyme [Nannochloropsis gaditana]) HSP 1 Score: 513.072 bits (1320), Expect = 0.000e+0 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMSLEKEVKLVEGEDAADGFSKKSVEESMGEGETKGVLGSPNLPGLMKRKGDPNQKEAASSMDKRLKKKGLKRL 248 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMSLEKEVKLVEGEDAADGFSKKSVEESMGEGETKGVLGSPNLPGLMKRKGDPNQKEAASSMDKRLKKKGLKRL Sbjct: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMSLEKEVKLVEGEDAADGFSKKSVEESMGEGETKGVLGSPNLPGLMKRKGDPNQKEAASSMDKRLKKKGLKRL 248
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|298705357|emb|CBJ28647.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 244.973 bits (624), Expect = 1.209e-77 Identity = 109/163 (66.87%), Postives = 131/163 (80.37%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGS 163 +SS+EN+SPQVI+R+ REIQDL R P GIR D IAE+HAEI GP TPY G+FH+KLVLS DFP+SPPRG+FLT+IYHPNV+ GDICVNTLKRDW+ VTL HVLQVIRCLLIVPFPESSLNDEAG+ FMESY +Y RR ++ +VHA + ++ + Sbjct: 10 LSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSA 172
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|1173929904|gb|OQR83062.1| (ubiquitin-conjugating enzyme E2 [Achlya hypogyna]) HSP 1 Score: 231.491 bits (589), Expect = 2.279e-73 Identity = 99/155 (63.87%), Postives = 128/155 (82.58%), Query Frame = 0 Query: 2 SSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHA 156 S++EN SPQ++ R+A+E++ L P GIRL + + D++AE+H EI GPE+TPYV G F VKL+L++ FP PP+G FLT+I+HPN+++ GDICVNTLKRDWS + L+HVLQVIRCLLIVPFPESSLNDEAGK FME Y +YARRA++LTS+HA Sbjct: 7 SAHENFSPQILQRVAKEVRQLASSPPAGIRLLETDSDSLAEIHVEISGPEETPYVGGFFEVKLLLTEGFPTVPPKGVFLTKIFHPNIAANGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTSIHA 161
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|673038620|ref|XP_008873271.1| (hypothetical protein H310_09084 [Aphanomyces invadans] >gi|574471388|gb|ETV98396.1| hypothetical protein H310_09084 [Aphanomyces invadans]) HSP 1 Score: 229.565 bits (584), Expect = 1.488e-72 Identity = 101/179 (56.42%), Postives = 139/179 (77.65%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMSLE 179 MS++EN SPQ+I R+A+EI+ L P GIR + +++AE+H E+ GPEDTPY G F +KL+L++ FP PP+G+FLT+I+HPNV++ GDICVNTLKRDW + L+HVLQVIRCLLIVPFPESSLNDEAGK FME Y++YA+RAR+LT++HA + ++N I + +S+++E Sbjct: 1 MSAHENFSPQIIQRVAKEIRQLATNPPAGIRYLPQDDESLAEIHVELVGPEDTPYAGGFFEMKLLLTEGFPTVPPKGHFLTKIFHPNVAANGDICVNTLKRDWCADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYSEYAQRARILTTIHASKT---KAKNTIDETTSNSLTIE 176
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|698809480|ref|XP_009837769.1| (hypothetical protein H257_12307 [Aphanomyces astaci] >gi|574107470|gb|ETV72983.1| hypothetical protein H257_12307 [Aphanomyces astaci]) HSP 1 Score: 228.024 bits (580), Expect = 5.569e-72 Identity = 100/158 (63.29%), Postives = 128/158 (81.01%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARR 158 MS++EN SPQ+I R+A+EI+ L P GIR + +++AE+H E+ GPEDTPY G F +KL+L++ FP PP+G+FLT+I+HPNV+S GDICVNTLKRDWS + L+HVLQVIRCLLIVPFPESSLNDEAGK FME Y +YA+RAR+LTS+HA + Sbjct: 2 MSAHENFSPQIIQRVAKEIRQLATNPPSGIRYLPQDDESLAEIHVELVGPEDTPYAGGFFEMKLLLTEGFPTVPPKGHFLTKIFHPNVASNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYAQRARILTSIHASK 159
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|695394124|ref|XP_009520800.1| (hypothetical protein PHYSODRAFT_326520 [Phytophthora sojae] >gi|348685697|gb|EGZ25512.1| hypothetical protein PHYSODRAFT_326520 [Phytophthora sojae]) HSP 1 Score: 227.639 bits (579), Expect = 2.643e-71 Identity = 114/213 (53.52%), Postives = 147/213 (69.01%), Query Frame = 0 Query: 5 ENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSS-AGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMSLEKEVKLVEGEDAADGFSKKSVEES-MGEGETKGVLGSP 215 ENL PQV R+ARE++ LV +P GIR + + ++E+HAEI GPEDTPY G F VKL L++ FP PPRG FLT+I+HPNVS AGDICVNTLK+DW P++ LAHVLQV+RCLLIVPFPESSLNDEAGK F++SY +YARRA+L T++HA ++ +SE ++ D EK+ K ED K+ E++ E E L +P Sbjct: 8 ENLPPQVAQRVARELRKLVLQPLDGIRYLPQDEEQLSEIHAEIRGPEDTPYEGGYFTVKLTLTESFPEQPPRGVFLTKIFHPNVSQPAGDICVNTLKKDWKPTLGLAHVLQVVRCLLIVPFPESSLNDEAGKLFLDSYDEYARRAKLWTNIHAPKRSAVASEESGDTSGED----EKKDKPTANEDGDKTQHKRPAEDAPNAEAEKDAALSTP 216
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|669151880|ref|XP_008611502.1| (ubiquitin-conjugating enzyme E2 S [Saprolegnia diclina VS20] >gi|530736976|gb|EQC35218.1| ubiquitin-conjugating enzyme E2 S [Saprolegnia diclina VS20]) HSP 1 Score: 225.328 bits (573), Expect = 4.723e-71 Identity = 101/174 (58.05%), Postives = 135/174 (77.59%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARR-KVNGSSENMIRSASR 173 M+++EN SPQ++ R+A+E++ L P GIRL + D++AE+H E+ GPE+TPYV G F VKL+L+ FP +PP+G FLT+I+HPN++S GDICVNTLKRDWS + L+HVLQVIRCLLIVPFPESSLNDEAGK FME Y +YARRA++LT +HA + K +E+ +A + Sbjct: 1 MAAHENFSPQILQRVAKEVRQLATNPPEGIRLLEQ--DSLAEIHVELRGPEETPYVGGFFEVKLLLTDGFPTTPPKGVFLTKIFHPNIASNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTDIHATKSKFKTDAESTASAAPK 172
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|813199704|ref|XP_012209423.1| (hypothetical protein SPRG_14896 [Saprolegnia parasitica CBS 223.65] >gi|641525405|gb|KDO19866.1| hypothetical protein SPRG_14896 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 224.942 bits (572), Expect = 6.411e-71 Identity = 101/176 (57.39%), Postives = 134/176 (76.14%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARR---KVNGSSENMIRSASR 173 M+++EN SPQ++ R+A+E++ L P GIRL + D++AE+H E+ GPE+TPYV G F VKL+L+ FP +PP+G FLT+I+HPN++ GDICVNTLKRDWS + L+HVLQVIRCLLIVPFPESSLNDEAGK FME Y +YARRA++LT +HA + K + N + SA + Sbjct: 1 MAAHENFSPQILQRVAKEVRQLATNPPDGIRLLEQ--DSLAEIHVELRGPEETPYVGGFFEVKLLLTDGFPTTPPKGVFLTKIFHPNIAPNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTDIHATKSKFKTTDAGSNAVSSAPK 174
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|1173960829|gb|OQS06918.1| (ubiquitin-conjugating enzyme E2 [Thraustotheca clavata]) HSP 1 Score: 223.016 bits (567), Expect = 4.182e-70 Identity = 95/158 (60.13%), Postives = 127/158 (80.38%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARR 158 MS++EN SPQ++ R+A+EI+ L P GIRL + + ++AE+H E+ GPE+TPYV G F VKLVL+ FP PP+G FLT+I+HPN++S G+ICVNTLKRDW+ + +H+LQVIRCLLIVP+PESSLND+AGK FME Y +YARRA++LTS+HA + Sbjct: 1 MSTHENFSPQIVQRVAKEIRQLATNPPIGIRLLEQDDASLAEIHVEVTGPEETPYVGGFFEVKLVLTDGFPAVPPKGVFLTKIFHPNIASNGEICVNTLKRDWNADLDFSHILQVIRCLLIVPYPESSLNDKAGKLFMECYEEYARRAKILTSIHATK 158
BLAST of EWM24313.1 vs. NCBI_GenBank
Match: gi|953490562|emb|CEG46216.1| (ubiquitin-conjugating enzyme [Plasmopara halstedii]) HSP 1 Score: 219.935 bits (559), Expect = 1.719e-68 Identity = 121/251 (48.21%), Postives = 166/251 (66.14%), Query Frame = 0 Query: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEVHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSS-AGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSENMIRSASRDSMS-LEKEVKLVEGEDAADGFSKKSVEESMGEGETKGV-LGSPNLPGLMKRKGDPNQKEAASSMDKRLKKKGLKRL 248 M + ENLS +V R+ARE++ LV +P GIR ++ + ++E++AEI GPEDTPY G F ++L L+++FP PPRG FLT+I+HPNVS AGDICVNTLK+DW S+ LAHVLQVIRCLLIVPFPESSLN+EAGK F++SY +YARRA+L TS+HA + RSA M+ KE +++ + K+S ++S+ K + L +P MK+ Q +S+ K +KKK +KRL Sbjct: 1 MLTRENLSHEVAQRVARELRKLVMQPLDGIRYLPHDKEQLSEIYAEIRGPEDTPYQGGFFKLRLTLAENFPQQPPRGVFLTKIFHPNVSQPAGDICVNTLKKDWKASLGLAHVLQVIRCLLIVPFPESSLNEEAGKLFLDSYDEYARRAKLWTSIHAPK----------RSALDKEMNETSKEESFDNDQNSNNNELKRSADQSVNLTSKKEITLSTP-----MKKMKI--QSNVENSLRKMVKKKAVKRL 234 The following BLAST results are available for this feature:
BLAST of EWM24313.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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