EWM24308.1, cds6362 (CDS) Nannochloropsis gaditana

Overview
NameEWM24308.1
Unique Namecds6362
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:380777..380823 -
Alignment locationCM002468.1:380365..380539 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24308.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100047g19.6071.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:380777..380823 -
CM002468.1supercontigCM002468.1:380365..380539 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24308.1 vs. NCBI_GenBank
Match: gi|585105700|gb|EWM24308.1| (hypothetical protein Naga_100047g19 [Nannochloropsis gaditana])

HSP 1 Score: 152.14 bits (383), Expect = 6.984e-47
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MNPMSSALDDHDLQCMHLGSHGCIARRADVFDADALRTQTASTHAGDNGMTAAVRHQSIQQQGPRVWEWSVVI 73
            MNPMSSALDDHDLQCMHLGSHGCIARRADVFDADALRTQTASTHAGDNGMTAAVRHQSIQQQGPRVWEWSVVI
Sbjct:    1 MNPMSSALDDHDLQCMHLGSHGCIARRADVFDADALRTQTASTHAGDNGMTAAVRHQSIQQQGPRVWEWSVVI 73
The following BLAST results are available for this feature:
BLAST of EWM24308.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105700|gb|EWM24308.1|6.984e-47100.00hypothetical protein Naga_100047g19 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6377rna6377Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications