EWM30041.1, cds635 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30041.1 vs. NCBI_GenBank
Match: gi|585112669|gb|EWM30041.1| (ankyrin repeat protein [Nannochloropsis gaditana]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
Query: 1 MLSFFPAYDTGSIENMDVIHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAAASAPSTCAENKEGKGPSASGVILSLLEAINRRGGGGREGHLYDCLNACNSNNKTALALACERGALDIISVLIAAGANPYLLPAGKEEVFKSSTDGDPSKKEILVSCIQVARRAPERVYFMSKIRCLADTMHALRKSTEAKESLTAEAIAEVSECDGEEGQQDVPIQNIKTRYDQELQHYQMKKSMAIASEVLKRRVEGKTEIPRVLLTTEGDERLREVARHVLIEGGLKLELFVELMEGLVVPQWFYDHL 380
MLSFFPAYDTGSIENMDVIHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAAASAPSTCAENKEGKGPSASGVILSLLEAINRRGGGGREGHLYDCLNACNSNNKTALALACERGALDIISVLIAAGANPYLLPAGKEEVFKSSTDGDPSKKEILVSCIQVARRAPERVYFMSKIRCLADTMHALRKSTEAKESLTAEAIAEVSECDGEEGQQDVPIQNIKTRYDQELQHYQMKKSMAIASEVLKRRVEGKTEIPRVLLTTEGDERLREVARHVLIEGGLKLELFVELMEGLVVPQWFYDHL
Sbjct: 1 MLSFFPAYDTGSIENMDVIHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAAASAPSTCAENKEGKGPSASGVILSLLEAINRRGGGGREGHLYDCLNACNSNNKTALALACERGALDIISVLIAAGANPYLLPAGKEEVFKSSTDGDPSKKEILVSCIQVARRAPERVYFMSKIRCLADTMHALRKSTEAKESLTAEAIAEVSECDGEEGQQDVPIQNIKTRYDQELQHYQMKKSMAIASEVLKRRVEGKTEIPRVLLTTEGDERLREVARHVLIEGGLKLELFVELMEGLVVPQWFYDHL 380
BLAST of EWM30041.1 vs. NCBI_GenBank
Match: gi|1057230478|ref|WP_068602224.1| (ankyrin repeat domain-containing protein [Tamlana sp. s12] >gi|1039216009|gb|OBQ56566.1| ankyrin [Tamlana sp. s12]) HSP 1 Score: 64.6994 bits (156), Expect = 6.188e-9 Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 0
Query: 13 IENMDVIHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAAASAPSTCAENKEGKG 145
+EN++ I GD+ V++L +P+L++ D + TPLIL+ D L + +++ AP +D R A GNTAL E+AEYLL G AD KN + T + A+ S + GKG
Sbjct: 1 MENVETFFSKIQSGDLEAVKSLINDQPELIHATDARGFTPLILASYFDKNDLAKVLIDKNAP-----IDARDAM-GNTALIGVAFKDNQEVAEYLLTHG-ADINAKNNHGVTALIFASMYDKSNMVKFLLGKG 126
BLAST of EWM30041.1 vs. NCBI_GenBank
Match: gi|1055487097|ref|WP_067146169.1| (ankyrin repeat domain-containing protein [Tamlana agarivorans]) HSP 1 Score: 62.7734 bits (151), Expect = 3.033e-8 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0
Query: 13 IENMDVIHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAA 130
+EN++ I GD+ V++L + +P+L++ D + TPLIL+ D L + +++ AP VD R A GNTAL E+AEYLL G AD KN + T + A+
Sbjct: 1 MENVETFFSKIQSGDLITVKSLIDNQPELIHATDARGFTPLILASYFDKNDLAKVLIDKNAP-----VDARDAM-GNTALIGVAFKDNQEVAEYLLTHG-ADINAKNNHGVTALIFAS 111
BLAST of EWM30041.1 vs. NCBI_GenBank
Match: gi|1097739890|emb|SFU58199.1| (hypothetical protein SAMN05216480_10899 [Pustulibacterium marinum]) HSP 1 Score: 61.2326 bits (147), Expect = 1.132e-7 Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 0
Query: 22 AIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPEAQATVDERTAPDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAA 130
AI GDV +V L + +P+L+ + D + TPLIL+ D L +V+ VE A VD + A GNTA+ AC G ++ YL+ +G A+ + N T + AA
Sbjct: 12 AIRNGDVEKVANLVDVQPELVNVRDQRGSTPLILAAYYDQLGVVKVLVEN-----GADVDAKDAS-GNTAMMGACFKGYKDVVAYLIDKG-ANVNETNSNGATALVYAA 113
BLAST of EWM30041.1 vs. NCBI_GenBank
Match: gi|909610271|gb|KNF00532.1| (hypothetical protein PSTG_06224 [Puccinia striiformis f. sp. tritici PST-78]) HSP 1 Score: 60.8474 bits (146), Expect = 6.106e-7 Identity = 74/246 (30.08%), Postives = 98/246 (39.84%), Query Frame = 0
Query: 19 IHVAIARGDVSRVQALCEAEPDLLYLDDWQARTPLILSVLADSLPLVRFFVEEVAPE-----------------AQATVDERTA-------------PDGNTALFYACRDGRIEIAEYLLKRGKADPFQKNRYNTTLFMIAAASAPSTCAENKEGKGPSASGVILSLLEAINRRGGGGREGHLYDCLNACNSNNKTALALACERGALDIISVLIAAGAN-PYLLPAGKEEVFKSSTDGDPSKKEIL 233
IH + G V A +P+ + D RTPL + + SL +VR +E+ P+ A A + E + G TAL YA GR+EI LL+ G AD K+R N AA+S A+ I LLE+ N G E LN ++ TAL LA E G + VLI AGAN L P GK + GD ++K IL
Sbjct: 5 IHRSAYEGQAQLVSAALAEDPNRINALDSDGRTPLHTASSSGSLSVVRVLLEQQEPKCDIEIQDAMGWTALIIAASAGITEVVSELIHAGANVNAVNQKGQTALHYAASKGRLEIGRLLLQYG-ADVNAKDRANQLPLHRAASSG--------------ATPFIKLLLESANSNEEKGTE-RPKAKLNVIDNAGHTALHLAFESGHAETACVLIEAGANRERLDPDGKRPDQLTEVLGDVAQKRIL 234 The following BLAST results are available for this feature:
BLAST of EWM30041.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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