EWM24333.1, cds6341 (CDS) Nannochloropsis gaditana

Overview
NameEWM24333.1
Unique Namecds6341
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:332115..332275 +
Alignment locationCM002468.1:332719..334063 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24333.1
Producttrigger factor
Orig transcript idgnl|cribi|Naga_100105g2.10572.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:332115..332275 +
CM002468.1supercontigCM002468.1:332719..334063 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006457protein folding
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR027304Trigger_fact/SurA_dom
IPR008881Trigger_fac_ribosome-bd_bac
IPR005215Trig_fac
IPR008880Trigger_fac_C
Homology
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|585105727|gb|EWM24333.1| (trigger factor [Nannochloropsis gaditana])

HSP 1 Score: 1014.22 bits (2621), Expect = 0.000e+0
Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query:    1 MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA 501
            MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA
Sbjct:    1 MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA 501          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|553183494|ref|XP_005853908.1| (trigger factor [Nannochloropsis gaditana CCMP526] >gi|553192480|ref|XP_005855578.1| trigger factor [Nannochloropsis gaditana CCMP526] >gi|422293470|gb|EKU20770.1| trigger factor [Nannochloropsis gaditana CCMP526] >gi|422295152|gb|EKU22451.1| trigger factor [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1013.06 bits (2618), Expect = 0.000e+0
Identity = 500/501 (99.80%), Postives = 501/501 (100.00%), Query Frame = 0
Query:    1 MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA 501
            MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQE+STQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA
Sbjct:    1 MLVNQRRCAAMAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEMSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDDA 501          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|375332081|gb|AFA52580.1| (trigger factor [Vaucheria litorea])

HSP 1 Score: 305.064 bits (780), Expect = 3.386e-95
Identity = 166/423 (39.24%), Postives = 263/423 (62.17%), Query Frame = 0
Query:   60 NSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKG--QRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQ--LAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEE-EVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKL 477
            NSSV + V +PGT T+KAY    + +    K SIPGF     +R+PEQVL+   G   VI    L++L + A+K AI  +D+KA+GQA L+   E ++    PGEP+ +E+ VDV+P ++FTG Y G  + V   PL+  +    L+ LR++ V  V     +    GD+ IV+M  F++L DG+RG  +  +A GE +E+VLE  +F+PG+++GL+G   G    IPV FP+ +      LAG KA F+V   E+  R +PE+++ FA  IRP LT   + +E++ A+N++ +++    R+KALE ALL    AEIPE  ++E  R+KFA+MM ++ +QG+ ++ E++KMIT ENF KY+E+    T K L + +A + +AE EG+++D  E++DQ++L + E + +  DE   ++++EA L
Sbjct:   16 NSSVRIIVDIPGTATQKAYQDTLRDL--SKKQSIPGFNSSSNKRIPEQVLVGYFG-EGVIKGSTLELLADTAIKDAIQSADIKAIGQAKLIEEAEKILLRLVPGEPLQLEVKVDVWPNIKFTGDYTGFTIAVQSEPLDQSQYDATLQRLRERAVVSVSAPENHAANKGDAIIVDMSPFEVLEDGSRGDPLPQLAGGEDLEIVLEAEKFMPGLIDGLLGIKVGEMREIPVQFPDKLGGEANVLAGKKAVFDVTCNEVLLRTLPEVNDDFANSIRPGLTLAELDKEILSALNSEGDKKKFEARDKALEAALLERIEAEIPETLVIERARQKFAIMMADMKSQGQQDDAELRKMITPENFNKYKEVVRESTTKQLKVSLALSMIAEKEGIELDQGEIEDQLELIRAEVKGEEFDEAVAKERIEATL 435          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|1210528689|dbj|GAX12559.1| (hypothetical protein FisN_13Lh009 [Fistulifera solaris])

HSP 1 Score: 277.715 bits (709), Expect = 3.998e-83
Identity = 152/448 (33.93%), Postives = 276/448 (61.61%), Query Frame = 0
Query:   60 NSSVALFVTVPGTLTRKAYDQACKRMIEESKT-SIPGFRKGQRVPEQVL---LNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRL--VDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQI-DLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDD 500
            +S+V + + VPG+ T+ AY++    +   SKT ++PGFRKG ++P QVL   ++A GG   +  +A++ L  + ++  + + ++  +GQA+L++  ETL   + PG+ I + +  DV+PE++F+GPY GLK    R P   EK+++AL  L+++  +L  ++ A  Y  ++GD+  VNM+ +    DG++G  + N A+G+ VEV+L  GR++ G+VEGLVG   G    + V FPE +RD  LAG KA F+VE+L++  R+VPE+ ++FA +++  LT E + +E+  A++ +  +     RNKAL EAL  I   ++P+  +  + R KFA+MM ++   G ++ E+K+ I  ENF KY+EI     ++   + +AT ++   EG+ V   ++++Q+  ++K   + +  DE  +R +++A L    V++ LA++AD+  ++ +++
Sbjct:   53 DSAVEIQIPVPGSATKAAYEKVAAEL---SKTIAVPGFRKGSKIPPQVLEQAMSAKGGRNALKVQAINELLRELVEPTLKQENLDPIGQATLLTPAETLAETYVPGQDITLPVRCDVWPEIKFSGPYTGLKGSYTRKPFNQEKLEKALFDLKERYAKLEAIEDA-SYALQMGDACTVNMEGYMGNGDGSKGEPLPNAASGDNVEVILGPGRYMEGLVEGLVGAKVGETRTVSVAFPEKLRDKSLAGKKAIFDVEVLQVAKRVVPELTDEFAAQVKAGLTKETLLRELRKAIDEEDAKEFLPARNKALGEALSKIVEVDVPDTLVTNQAREKFAVMMADMRDNGVADAEIKRQINPENFAKYKEIVKDDIIRDFKVSMATDEIGRLEGITVPDYQVEEQMQSIQKDMQKGEEYDENMIRARVQATLERQAVMNWLAEKADLEVIEKTEE 496          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|1210513480|dbj|GAX27877.1| (trigger factor [Fistulifera solaris])

HSP 1 Score: 275.789 bits (704), Expect = 8.243e-83
Identity = 152/448 (33.93%), Postives = 275/448 (61.38%), Query Frame = 0
Query:   60 NSSVALFVTVPGTLTRKAYDQACKRMIEESKT-SIPGFRKGQRVPEQVL---LNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRL--VDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQI-DLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDD 500
            +S+V + + VPG+ T+ AY++    +   SKT ++PGFRKG ++P QVL   ++A GG   +  +A++ L  + ++  + + ++  +GQA+L++  ETL   + PG+ I + +  DV+PE++F+GPY GLK    R P   EK+++AL  L+++  +L  ++ A  Y  ++GD+  VNM+ F   +DG++G  + N A+G+ VEV+L  GR++ G+VEGLVG   G    + V FPE +RD  LAG KA F+VE+L+   R+VPE+ ++FA +++  LT   + +E+  A++ +  +     RNKAL EAL  I   ++P+  +  + R KFA+MM ++   G ++ E+K+ I  ENF KY+EI     ++   + +AT ++   EG+ V   ++++Q+  ++K   + +  DE  +R +++A L    V++ LA++AD+  ++ +++
Sbjct:   15 DSAVEIQIPVPGSATKAAYEKVAAEL---SKTIAVPGFRKGSKIPPQVLEQAMSAKGGRNALKVQAINELLRELVEPTLKQENLDPIGQATLLTPAETLAETYVPGQDITLPVRCDVWPEIKFSGPYTGLKGSYTRKPFNQEKLEKALFDLKERYAKLETIEDA-SYALQMGDACTVNMEGFMGNADGSKGEPLPNAASGDNVEVILGPGRYMEGLVEGLVGAKVGETRTVSVAFPEKLRDKSLAGKKAIFDVEVLQAAKRVVPELTDEFAAQVKAGLTKATLLKELRKAIDEEDAKEFLPARNKALGEALARIVEVDVPDTLVTNQAREKFAVMMADMRDNGVADAEIKRQINPENFAKYKEIVKDDIIRDFKVSMATDEIGRLEGITVPDYQVEEQMQSIQKDMQKGEEYDENMIRARVQATLERQAVMNWLAEKADLEVIEKTEE 458          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|1072232793|gb|OEU17524.1| (trigger factor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 273.478 bits (698), Expect = 1.620e-81
Identity = 174/504 (34.52%), Postives = 293/504 (58.13%), Query Frame = 0
Query:   11 MAAILFSAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQ-TTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKT-SIPGFRKGQRVPEQVLLNAV---GGPQVIINEALDILCEDALKKAI-DESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTG------PYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTA-PGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNA-DAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAE--RQGLDEKALRDQLEAKLLADMVLDRLADQAD--ITYVD 496
            +A +L +A   QAF+P     L      ++LS Y   S ++Q +T+E   +S+V + + VPG+ T+ AYD+ C  +   SKT ++PGFRKG ++P  VL NA+   GG   +  +A++ L  + ++ AI +E  ++ +GQ +L +  E L   FKPG+   M +  DV+PE+++T       PY G+K          +K  +AL  LR++ V L       Y  ++GD+ +VNM+ +    DG +G ++   A+G+ V+VVL +GR++ G+VEGLV         + VTFPE ++D  LAG  A F+V +LE   R +PE+ ++FA E+R  LT E +K+E+  AV+  DA+E T   RN AL ++L  +   E+P+  +  + R KFA+MM ++   G +++E+K  I  +NF KY+ I     +K   + +AT ++A  E ++V+  ++++Q++  K +AE  ++  DE  +R ++EA LL   V+D LA++AD  + +VD
Sbjct:    8 IAGLLLAATTTQAFVP-----LNLAFTSNRLS-YDGYSTSLQASTLERLPDSAVRIKIGVPGSATKAAYDKVCTEL---SKTITLPGFRKGSKIPPAVLENAMAAKGGRNALRVQAINTLLSELIESAIKEEHGLEPIGQPALETAAEELADNFKPGDDFDMFVKCDVWPEIQWTAVEGSDKPYMGMK---------GDKFNKALGDLRERYVTLEPIEDKDYALQMGDACVVNMEGYMATDDGQKGEKLPEAASGDRVDVVLGDGRYMTGLVEGLVNAKVEETKEVKVTFPEALKDKTLAGKTAIFDVTVLEASKRTLPEVTDEFANEVRAGLTAETLKKELQTAVDTEDAKEYTPA-RNAALAKSLALVMDVEVPDTLVTNQAREKFAMMMADMRNNGVNDDEIKNQINSDNFLKYKNIVKDDIIKDFKVSMATDEIARLENIEVEDYQIEEQMESIKQDAENSKEDFDETQIRSRVEATLLRQAVMDFLAEKADLEVKFVD 492          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|224009612|ref|XP_002293764.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970436|gb|EED88773.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 263.848 bits (673), Expect = 2.928e-79
Identity = 157/452 (34.73%), Postives = 262/452 (57.96%), Query Frame = 0
Query:   60 NSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAV---GGPQVIINEALDILCEDALKKAI-DESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFT------GPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGK-----LGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQG----LDEKALRDQLEAKLLADMVLDRLADQADI 492
            NS+V L + +P T T  AYD+    + +  K SIPGFRKG ++P QV+ NA    GG + +   A++ LC + +  A+ +E D++ +GQ SLV+  E +  +F PGE + + +  DV+P++++        PY GL     R P   E+   AL  L+++ V+L      YE       +GD+ +VNM  +   + G +G  + + A+G+ VEVVL  GR++ G+VEGLV    G    + V FP  +++  LAG  A F+VEIL    RI+PE+ ++FA+++RP LT E +K E+  AV++   +     RN+AL +AL  +   E+P+  I  + R K+ALMM ++   G ++E++KKMI+ ENF KY+E++    V+   + +A  ++A  E +QV   ++++Q+   K +A ++G    +DE+  R ++E+ L   MV D LA+ A++
Sbjct:    2 NSAVELTLQIPATATGAAYDKCLAEVAK--KVSIPGFRKGAKIPPQVIENAWSRNGGKKALKTMAINELCGELIGPALKEEYDLEPIGQPSLVTSAEVIAESFTPGEALEVTVKCDVWPDIQWKEVEGQEKPYFGLTGSYKRKPFNQERFDAALRDLKERYVKL----EPYEDASQQLVMGDACVVNMVGYMATASGEKGDALPDAASGDNVEVVLGPGRYMDGLVEGLVDGKVGEVKTVNVRFPAALKNKDLAGKDAIFDVEILSASKRILPELTDEFAEQVRPGLTAESLKDELRKAVDSQDAQEYMGARNEALGKALSGVLEVEVPDTLITNQAREKYALMMTDMRNSGMADEDIKKMISPENFIKYKELSVDGIVRDFKVSMAVDEIARLENIQVPAYQVEEQMQSLKDQAAQEGQSEDMDEEQTRRKVESTLERRMVYDFLAEHANL 447          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|544211836|ref|XP_005536317.1| (probable trigger factor [Cyanidioschyzon merolae strain 10D] >gi|449016629|dbj|BAM80031.1| probable trigger factor [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 258.84 bits (660), Expect = 2.560e-76
Identity = 156/468 (33.33%), Postives = 275/468 (58.76%), Query Frame = 0
Query:   34 QRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLEN--EKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTV-KTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVS 498
             R+ H KL + + L+  V++       S V+L + V G  TR A D   + +  E   ++PGFRKG +VP+ VL++  G  + I   AL+ +  + +K A+ ++ +  +G A+L+  PE ++A F PGEP+  +++V+V+PE +    Y   ++ V R+P ++  E V++ LE LRK+  +L D  PG     G +AI +++ ++ML +G RG  +R +AA + V+V +E+GRFL G VEGL+G   G  + IP+ FPEN +  +LAG    FEV+I  +K R++PE+ +++ +++      E +K  +   +  + E   + N ++A+E+ +L+IT  ++PE  I E+ +R+FA +M E+  QG  + ++K MITKEN+E+YR      T  ++L +G   +K+ E EGL++D  EL+ ++   +  A  +  DEK +RD+L A +  ++V D +    +  ++  S
Sbjct:   64 HRRSHGKL-VAANLAMAVESERLGSEGSRVSLRIKVDGESTRAAVDSVLQEL--EKTATVPGFRKG-KVPKNVLVSYFG-EKNINASALEEVVNENVKVALQDAGIPYLGNATLIEKPEDVVARFVPGEPLSFDISVEVWPEAKLKESYKSTEIVVARLPDDDLEELVERTLEDLRKRTAQLRDV-PGGTIDYGYTAIASIRCYRMLPNGKRGERIRGVAAEDDVQVPIEKGRFLEGFVEGLIGAKVGEVLQIPIRFPENHKVKKLAGKSVVFEVKIHAVKERVLPEVTDEWVRQVTEQENVEKLKDVLRAKLVEEKEVMRERNMDRAIEDFILSITEVDLPESLIEEQIKRQFAELMTELKNQGVPDHKIKAMITKENYERYRTGPARGTAERSLRIGFGVSKIVESEGLKLDDSELERRLQEERKLAGAEDFDEKPVRDRLVAIMERELVFDFIRKNCNFKFISSS 525          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|219114238|ref|XP_002176290.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402693|gb|EEC42682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 261.536 bits (667), Expect = 2.845e-76
Identity = 171/509 (33.60%), Postives = 279/509 (54.81%), Query Frame = 0
Query:   11 MAAILFSAWN-AQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGFRKGQRVPEQVL---LNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEF-----------TGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVD-TAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQLAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNA-DAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQID-LRKLEAE-RQGLDEKALRDQLEAKLLADMVLDRLADQADITYVDVSDD 500
            +AA   S W    A+ P     +  R +  +++    +S +    V+   +S+V L + VP   T+ AYD+ C+ +       IPGFRKG R+P  VL   L A GG   +  +A++ L    ++ A+ +++++ +GQ +L+   E L   F+ G+ + + +  DV+P+VE+             PY GL     R P    K+  AL  LR++   LV  T   Y  ++GD+  VNM  +     G +G  + N A+G+ VEV+L  GR++ G+VEGLVG   G    + V FPE +RD  LAG +A F+VE+LE   R VPE+ ++FA +++  LT + +  E+  A++A DA+E T   RNKAL +AL  +   ++P+  +  + R KFA+MM E+   G S+EE+K+ I  ENF KY+EI     +K   + +A  ++   E +QV   ++++Q++ +RK  AE +Q LDE  +R ++EA L    V D LA+++ +  V+  DD
Sbjct:   11 LAAAASSHWGETSAWAP----FVSHRTRPHRITTPRLMSTSPSNAVKRLPDSAVELAIPVPAAATQAAYDKVCRELAR--TVQIPGFRKGSRIPPPVLEQALAAKGGRNALKTQAINELVGTLVEPALKDANLQPIGQPTLLVPAEELANDFEAGKSVTLTVRCDVWPDVEWKRDPDRADDPDAKPYLGLTGSYRRKPFNQPKLDLALNDLRERYATLVPITDAEYRLQMGDACTVNMVGYLATPQGDKGEPLPNAASGDRVEVILGTGRYMEGLVEGLVGAKVGETKAVQVNFPEKLRDKSLAGKRAIFDVEVLEASERQVPEVTDEFAVQVKAGLTADTLLAELRKAIDAEDAKEFTPA-RNKALGQALADVMDMQVPDTLVSNQAREKFAVMMSEMRDSGVSDEEIKRQINPENFAKYKEIVKDDIIKDFKVSIAADEIGRLENVQVPDYQVEEQMEAIRKDAAESKQELDENMIRGKVEATLQRQAVFDWLAERSQLQ-VEFEDD 511          
BLAST of EWM24333.1 vs. NCBI_GenBank
Match: gi|298711832|emb|CBJ32857.1| (Trigger factor (TF) [Ectocarpus siliculosus])

HSP 1 Score: 254.988 bits (650), Expect = 3.286e-76
Identity = 160/418 (38.28%), Postives = 240/418 (57.42%), Query Frame = 0
Query:    8 CAAMAAILF--------SAWNAQAFIPRLPANLYQRQQHSKLSLYSTLSENVQTTVEARANSSVALFVTVPGTLTRKAYDQACKRMIEESKTSIPGF----RKGQ-RVPEQVLLNAVGGPQVIINEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDSAIVNMQAFQMLSDGTRGPEMRNIAAGEGVEVVLEEGRFLPGVVEGLVGKPAGCKVVIPVTFPENIRDPQ---LAGIKAEFEVEILELKNRIVPEIDEQFAKEIRPDLTPEGIKQEVVDAVNADAEERTKMNRNKALEEALLAITRAEIPECWIVEETRRKFALMMQEVSTQGKSEEEVKKMITKE 409
            CA  A + F        S   A A +P    +  Q+Q+   L       E    T +  ANSS+ L + VPG  T+  YD+A + + +E+  SIPGF     KG  + P +V+    G  +V   ++L ++ E  + +AI+  D++A+G A LV     +   F PG P+++E+ +DV+PEV     Y G +++V+  P++  +V  A + L+++ V L DT  GY  +LGDS I NM  F+  +DG++G ++ NIA+G+GV++VLE GR++PG+ EG+ G  AG    I +TFP+ +  PQ   L G KA FEVE +E+  R VPE++E+FA+ IR  LT E +  EV  AV  +     +  RNKA EEALL      IPE  IVE+ R KFA+MM E   QG+S+ +++ MITKE
Sbjct:   12 CAPAALVAFVVRPNPGSSVIRAPASVPAAATSNTQKQRVGPLFAKPLAYE---VTHKPAANSSIILNLDVPGETTQLCYDKAIRALSKEAGNSIPGFGNKGNKGNTKHPPEVIERHFGMEEVK-GQSLKVISELVVNEAINSLDLQAIGSAELVQDISVVTQLFTPGVPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEEGYAAQLGDSVIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKL-GPQGGDLEGTKAVFEVEAVEVMKRNVPEVNEEFAQSIREGLTLEELTTEVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKE 424          
The following BLAST results are available for this feature:
BLAST of EWM24333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105727|gb|EWM24333.1|0.000e+0100.00trigger factor [Nannochloropsis gaditana][more]
gi|553183494|ref|XP_005853908.1|0.000e+099.80trigger factor [Nannochloropsis gaditana CCMP526] ... [more]
gi|375332081|gb|AFA52580.1|3.386e-9539.24trigger factor [Vaucheria litorea][more]
gi|1210528689|dbj|GAX12559.1|3.998e-8333.93hypothetical protein FisN_13Lh009 [Fistulifera sol... [more]
gi|1210513480|dbj|GAX27877.1|8.243e-8333.93trigger factor [Fistulifera solaris][more]
gi|1072232793|gb|OEU17524.1|1.620e-8134.52trigger factor [Fragilariopsis cylindrus CCMP1102][more]
gi|224009612|ref|XP_002293764.1|2.928e-7934.73predicted protein, partial [Thalassiosira pseudona... [more]
gi|544211836|ref|XP_005536317.1|2.560e-7633.33probable trigger factor [Cyanidioschyzon merolae s... [more]
gi|219114238|ref|XP_002176290.1|2.845e-7633.60predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298711832|emb|CBJ32857.1|3.286e-7638.28Trigger factor (TF) [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6356rna6356Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications