EWM24342.1, cds6339 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|585105735|gb|EWM24341.1| (choline dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 1202.19 bits (3109), Expect = 0.000e+0 Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0 Query: 1 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR 583 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR Sbjct: 174 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR 756
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|585105736|gb|EWM24342.1| (choline dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 1199.5 bits (3102), Expect = 0.000e+0 Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0 Query: 1 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR 583 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR Sbjct: 1 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDEFFGR 583
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|553179706|ref|XP_005852748.1| (glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana CCMP526] >gi|553192511|ref|XP_005855586.1| glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana CCMP526] >gi|422293478|gb|EKU20778.1| glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana CCMP526] >gi|422295785|gb|EKU23084.1| glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1036.17 bits (2678), Expect = 0.000e+0 Identity = 503/507 (99.21%), Postives = 506/507 (99.80%), Query Frame = 0 Query: 1 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWV 507 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMD+RSNLDIVLKA+VTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSR DRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKW+ Sbjct: 174 MFDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDKRSNLDIVLKAKVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRVDRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWL 680
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|298715391|emb|CBJ28002.1| (choline dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 391.734 bits (1005), Expect = 3.044e-124 Identity = 243/634 (38.33%), Postives = 348/634 (54.89%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDG--PPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIM---DERSNLDIVLKAEVTHVLM--------SGEKDG--------------VYTATGVSFAAEGGDSREARLKSPG-RGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDL---------------------QLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGE-GFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGP-------DLVDEGV-LKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFIL 577 FD+PL+WS+V+H + H + A++AK LGGCG HNAMLYVR L DF W++ G+ + +A+ E++ G P +HG+GGPI ++PP ++D+VAP+FL++C G+ +++DFN P GR GA YYHF +++GVR SAARA LG I+ D R+N+DIV A V+ VL+ E DG V ATGV F + G + + +PG G+ VV+TAGA+HTPK+LM SG+G + +LE G+ + D+P +G+NLQDH SV + + L + + +A +EL YK V++ ++ G T GG D +Q +IF+S+G +AGAFLKS S ++ PD+ QLTVFPR++EPH++ AN+ +P PP MLVT+++LDP+ R V L+ D G + EGE LS++D KL WGV VR IA+TSP+ E + E PGP D E V L WV+++ + NSHWCG+ +M K DP VV+ R+ V+GVD L V DASV P IP+GN HSTV++VA++ A F++ Sbjct: 125 FDIPLMWSSVSHMKEEH---QNALVAKALGGCGIHNAMLYVRGLESDFAKWDVE--GFDYASAVETWKKNENYTGRGPLPEWHGRGGPIATSPPDFIDEVAPFFLDSCEGAGIRLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNVDIVTGAHVSKVLIEDAQPVPTESEDDGDTVASLSEGKGGRTVPAATGVEFVLD-GKVEQVNIAAPGSHGRAGSAVVVTAGALHTPKLLMTSGIGDKAELEAHGLGCIADVPELGKNLQDHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLDFPPGVTI--------------GGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQCSCLPLIPSVPVSDSFWPKQQLTVFPRVTEPHILA----------------LANIRPSPQAPP-------MMLVTVSVLDPEGRCVVRLNEDDPHRGNPHIER---DQREGEPDPLSELDAKKLAWGVGQVRRIAQTSPLLEELRGEVYPGPGVSGAADDTAGEDVDLVGWVKQHVYSNSHWCGTARMGKASDPKSVVNERMKVIGVDNLFVGDASVLPYIPNGNVHSTVVLVATKLASFLV 712
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|635365843|emb|CCI45779.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 351.673 bits (901), Expect = 1.300e-109 Identity = 227/590 (38.47%), Postives = 296/590 (50.17%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIR-SAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDE-RSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGK---------GNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKD-YTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FD+P W++VA YHWD +AK LGGCG HNAMLYVR+LP D AWN+ + WTWE AL +A+EDFDGP S +HGK GPIR S + D ++ FL AC + + S DFN P RLGA YYHF I++GVR SAARA +GP++ + RSN D+ L V ++++ E G S E L G G GK VVLTAGAI+TPKIL+ SG+GP LE IPV LP VG+NLQDHP + + + A SF+ T ++ + F + +KD + I S+G + GAFL S G+ PA +Q+T FP + E + + P Q+ +L T+ALL P AR +V+LD D P R V EG LS D L WGV+ VR + + + E E +PG + + L +WV +N + NSHW GS + GVVD RL V GVD LRVADASV P IP+GN HSTVL+VAS A+ I ++ Sbjct: 154 FDIPFYWTSVAKNKKYHWDYPDVNVAKALGGCGIHNAMLYVRALPSDIRAWNIEN--WTWEKALKLYVAMEDFDGPSSKFHGKNGPIRTSLAASHGDDMSERFLAACDASNIRRSADFNVPEERLGAGYYHFNIRDGVRDSAARALVGPMLQQNRSNFDLQLNTIVKRIILN----------------EDGTSVEGVLVHDGNGAGKTYIVPVAKSATVVLTAGAINTPKILLLSGIGPENDLERLKIPVKRHLPRVGKNLQDHPVIGIVYE---------KADFSSFDMRTSFEKY-------------------------------FAAHNLSTCGEKDCFGILGSTGISVGAFL-SPPGALLPA-------IQITFFP-----------NHTSEPIFSNKGP-----------------QKNGLLFTVALLSPDARNTVKLDSNDHKIAP---RVNPVRIDEGSVHLSAKDARHLAWGVQVVRELVSSPSLREVTGSEIVPGDAIQSQEALTQWVVENHYRNSHWVGSASVGLSPKD-GVVDHRLRVFGVDNLRVADASVIPLIPNGNVHSTVLVVASFAAEMIKED 645
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|635365842|emb|CCI45778.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 350.903 bits (899), Expect = 2.417e-109 Identity = 228/591 (38.58%), Postives = 298/591 (50.42%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIR-SAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDE-RSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGK---------GNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKD-YTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKM-TKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FD+P W++VA YHWD +AK LGGCG HNAMLYVR+LP D AWN+ + WTWE AL +A+EDFDGP S +HGK GPIR S + D ++ FL AC + + S DFN P RLGA YYHF I++GVR SAARA +GP++ + RSN D+ L V ++++ E G S E L G G GK VVLTAGAI+TPKIL+ SG+GP LE IPV LP VG+NLQDHP + + + A SF+ T ++ + F + +KD + I S+G + GAFL S G+ PA +Q+T FP + E + + P Q+ +L T+ALL P AR +V+LD D P R V EG LS D L WGV+ VR + + + E E +PG + + L +WV +N + NSHW GS + +D GVVD RL V GVD LRVADASV P IP+GN HSTVL+VAS A+ I ++ Sbjct: 156 FDIPFYWTSVAKNKKYHWDYPDVNVAKALGGCGIHNAMLYVRALPSDIRAWNIEN--WTWEKALKLYVAMEDFDGPSSKFHGKNGPIRTSLAASHGDDMSERFLAACDASNIRRSADFNVPEERLGAGYYHFNIRDGVRDSAARALVGPMLQQNRSNFDLQLNTIVKRIILN----------------EDGTSVEGVLVHDGNGAGKTYIVPVAKSATVVLTAGAINTPKILLLSGIGPENDLERLKIPVKRHLPRVGKNLQDHPVIGIVYE---------KADFSSFDMRTSFEKY-------------------------------FAAHNLSTCGEKDCFGILGSTGISVGAFL-SPPGALLPA-------IQITFFP-----------NHTSEPIFSNKGP-----------------QKNGLLFTVALLSPDARNTVKLDSNDHKIAP---RVNPVRIDEGSVHLSAKDARHLAWGVQVVRELVSSPSLREVTGSEIVPGDAIQSQEALTQWVVENHYRNSHWVGSASVGLSPKD--GVVDHRLRVFGVDNLRVADASVIPLIPNGNVHSTVLVVASFAAEMIKED 647
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|635365841|emb|CCI45777.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 350.903 bits (899), Expect = 2.733e-109 Identity = 227/590 (38.47%), Postives = 296/590 (50.17%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIR-SAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDE-RSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGK---------GNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKD-YTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FD+P W++VA YHWD +AK LGGCG HNAMLYVR+LP D AWN+ + WTWE AL +A+EDFDGP S +HGK GPIR S + D ++ FL AC + + S DFN P RLGA YYHF I++GVR SAARA +GP++ + RSN D+ L V ++++ E G S E L G G GK VVLTAGAI+TPKIL+ SG+GP LE IPV LP VG+NLQDHP + + + A SF+ T ++ + F + +KD + I S+G + GAFL S G+ PA +Q+T FP + E + + P Q+ +L T+ALL P AR +V+LD D P R V EG LS D L WGV+ VR + + + E E +PG + + L +WV +N + NSHW GS + GVVD RL V GVD LRVADASV P IP+GN HSTVL+VAS A+ I ++ Sbjct: 157 FDIPFYWTSVAKNKKYHWDYPDVNVAKALGGCGIHNAMLYVRALPSDIRAWNIEN--WTWEKALKLYVAMEDFDGPSSKFHGKNGPIRTSLAASHGDDMSERFLAACDASNIRRSADFNVPEERLGAGYYHFNIRDGVRDSAARALVGPMLQQNRSNFDLQLNTIVKRIILN----------------EDGTSVEGVLVHDGNGAGKTYIVPVAKSATVVLTAGAINTPKILLLSGIGPENDLERLKIPVKRHLPRVGKNLQDHPVIGIVYE---------KADFSSFDMRTSFEKY-------------------------------FAAHNLSTCGEKDCFGILGSTGISVGAFL-SPPGALLPA-------IQITFFP-----------NHTSEPIFSNKGP-----------------QKNGLLFTVALLSPDARNTVKLDSNDHKIAP---RVNPVRIDEGSVHLSAKDARHLAWGVQVVRELVSSPSLREVTGSEIVPGDAIQSQEALTQWVVENHYRNSHWVGSASVGLSPKD-GVVDHRLRVFGVDNLRVADASVIPLIPNGNVHSTVLVVASFAAEMIKED 648
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|325185695|emb|CCA20177.1| (choline dehydrogenase putative [Albugo laibachii Nc14]) HSP 1 Score: 348.977 bits (894), Expect = 1.371e-108 Identity = 227/592 (38.34%), Postives = 299/592 (50.51%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIR-SAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMDE-RSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGK---------GNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKD-YTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFP-RISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHGPARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKM-TKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FD+P W+ VA+ YHW +AK LGGCG HNAMLYVR+LP D EAWN+ + WTWE AL +A+EDFDGP S++HGK GPIR S + D ++ FL AC + + S DFN P RLGA YYHF I+NG+R SAARA LGP++ + RSN ++ L V ++++ E G S E L G GK G VVLTAGAI+TPK+L+ SG GP L+ IPV LP VGENLQDHP + + + A + + T ++ + F + ++KD + I ++G + GAFL S G+ PA +Q+T FP SEP +K +++ +L T+ALL P AR +V+LD D P R V E LSD D L WGV+ VR + + + E E PG D+ E L +WV +N NSHW GS + + ED GVVD RL V GVD LRVADAS+ P IP+GN HSTVL+VAS A+ I ++ Sbjct: 157 FDIPFYWTRVANNEKYHWHYPDVNVAKALGGCGIHNAMLYVRALPSDIEAWNIEN--WTWEKALQLYLAMEDFDGPDSAFHGKNGPIRTSLAASHGDDMSERFLAACDASNIRRSADFNIPEERLGAGYYHFNIRNGIRDSAARALLGPMLQQNRSNFNLRLNTIVKRLILN----------------EDGTSVEGVLLHSADGAGKTYNVPVSKNGVVVLTAGAINTPKVLLLSGFGPEDDLKRLDIPVQRHLPRVGENLQDHPVIGLVYE---------KAGFSTSDMRTSFEKY-------------------------------FMAHNLSTCEEKDCFGILGTTGISVGAFL-SPPGALLPA-------IQITFFPNHTSEPIFAKKV-----------------------------SKKNGLLFTVALLSPDARNTVKLDSNDHKIAP---RVNPVRIDEDSVHLSDKDARHLAWGVQVVRELVASPSLREVTGSEITPGEDVQSEEALIQWVLENHHRNSHWVGSASVGSSPED--GVVDHRLRVFGVDNLRVADASIIPLIPNGNVHSTVLVVASYAAEMIKED 648
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|566030571|gb|ETI53482.1| (hypothetical protein, variant 4 [Phytophthora parasitica P1569]) HSP 1 Score: 334.724 bits (857), Expect = 1.649e-104 Identity = 219/594 (36.87%), Postives = 288/594 (48.48%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMD------ERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHG----------PARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FDVP W+ VA+ HW +AK LGGCG HNAMLYVR+LP D W + + WTWE AL +++EDFDGP SSYH K G IR++PP ++ F+EAC G+P + DFNAP+GR GA YYHF ++GVR SAA+AFLGPI+D +R N ++L VT + S D V V F G + RL G V++TAGAI+TPKILM SG+G + L++AG+P+ LP VG NLQDHP + M F +P + A S+ T K + + +F S+G + GAFL + P++QLT+FPR SEPH+ A ++VTIALL P AR V L + + P V E + E L D+ K+ W + VR IA + E PG ++ L WV N F NSHW GS M E+ GVVD L V G+ LRVADASV P IP+GN HSTV+MVA+R A+ + ++ Sbjct: 17 FDVPFYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLRRWQMEN--WTWEKALDIYLSIEDFDGPNSSYHSKQGFIRTSPPALALDMSREFIEACVELGIPRTADFNAPDGRYGAGYYHFNTRDGVRESAAKAFLGPILDSKTAESKRENFRLMLDTTVTRI--SINDDNVTEGVEVRFG--NGTGQLIRLAE------HGEVIVTAGAINTPKILMLSGLGNQDALKKAGLPLKKHLPRVGMNLQDHPVIGMVFEYKSPRVVDLKADLDSYFTATNAKH----------------------------------------TNVSSFGLFGSAGLSTGAFLIPPGAT--------LPEIQLTLFPRKSEPHMSNS---------------------------AGLDHMTEVVVTIALLHPLARSRVVLIHDENDYVDDNDIDDHLIPRVVSEIPDAKPE---HLRHGDVWKISWAIGVVREIAAKLAEKKLIGRELSPGAEITSPKDLNDWVFDNVFRNSHWVGSASMANSEEE-GVVDNHLRVFGIQNLRVADASVIPLIPNGNVHSTVVMVANRAAQILRED 519
BLAST of EWM24342.1 vs. NCBI_GenBank
Match: gi|568056316|gb|ETM53028.1| (hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 335.88 bits (860), Expect = 1.148e-103 Identity = 219/594 (36.87%), Postives = 289/594 (48.65%), Query Frame = 0 Query: 2 FDVPLLWSTVAHQADYHWDVEGAMIAKVLGGCGAHNAMLYVRSLPKDFEAWNLTDVGWTWEAALAEDMALEDFDGPPSSYHGKGGPIRSAPPMYVDQVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIMD------ERSNLDIVLKAEVTHVLMSGEKDGVYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQDHPSVPMTFTLTTPLAGRVAAAAGSFEELTEYKDWVVEGGEILRAKGATSRADRAGGPGQQWGGGGFFPGDQPGSQQKDYTIFASSGFTAGAFLKSDKGSKNPAFKENYPDLQLTVFPRISEPHLVQKQQESEEAMDAGASPRAANLSSTPTLPPASKTQRGTMLVTIALLDPQARYSVELDPRDAMHG----------PARVREANVSASEGEGFLSDMDIGKLIWGVRNVRVIARTSPMTEAAQEETLPGPDLVDEGVLKKWVRKNKFVNSHWCGSCKMTKEEDPMGVVDPRLHVMGVDGLRVADASVFPTIPSGNTHSTVLMVASRGAKFILDE 579 FDVP W+ VA+ HW +AK LGGCG HNAMLYVR+LP D W + + WTWE AL +++EDFDGP SSYH K G IR++PP ++ F+EAC G+P + DFNAP+GR GA YYHF ++GVR SAA+AFLGPI+D +R N ++L VT + S D V V F + G + RL G V++TAGAI+TPKILM SG+G + L++AG+P+ LP VG NLQDHP + M F +P + A S+ T K + + +F S+G + GAFL + P++QLT+FPR SEPH+ A ++VTIALL P AR V L + + P V E + E L D+ K+ W + VR IA + E PG ++ L WV N F NSHW GS M E+ GVVD L V G+ LRVADASV P IP+GN HSTV+MVA+R A+ + ++ Sbjct: 125 FDVPFYWTNVANTPSLHWAYPDVNVAKALGGCGIHNAMLYVRALPSDLRRWQMEN--WTWEKALDIYLSIEDFDGPNSSYHSKQGFIRTSPPALALDMSREFIEACVELGIPRTADFNAPDGRYGAGYYHFNTRDGVRESAAKAFLGPILDSKTAESKRENFRLMLDTTVTRI--SINDDNVTEGVEVRFGNDTG--QLIRLAE------HGEVIVTAGAINTPKILMLSGLGNQDALKKAGLPLKKHLPRVGMNLQDHPVIGMVFEYKSPRVVDLKADLDSYFTATNAKH----------------------------------------TNVSSFGLFGSAGLSTGAFLIPPGAT--------LPEIQLTLFPRKSEPHMSNS---------------------------AGLDHMTEVVVTIALLHPLARSRVVLIHDENDYVDDNDIDDHLIPRVVSEIPDAKPE---HLRHGDVWKISWAIGVVREIAAKLAEKKLIGRELSPGAEITSSKDLNDWVFDNVFRNSHWVGSASMANSEEE-GVVDNHLRVFGIQNLRVADASVIPLIPNGNVHSTVVMVANRAAQILRED 627 The following BLAST results are available for this feature:
BLAST of EWM24342.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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