EWM24345.1, cds6332 (CDS) Nannochloropsis gaditana

Overview
NameEWM24345.1
Unique Namecds6332
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:305935..306021 -
Alignment locationCM002468.1:305547..305738 -
Alignment locationCM002468.1:305279..305455 -

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Properties
Property NameValue
Protein idEWM24345.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100105g11.10584.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:305935..306021 -
CM002468.1supercontigCM002468.1:305547..305738 -
CM002468.1supercontigCM002468.1:305279..305455 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM24345.1 vs. NCBI_GenBank
Match: gi|585105739|gb|EWM24345.1| (hypothetical protein Naga_100105g11 [Nannochloropsis gaditana])

HSP 1 Score: 309.686 bits (792), Expect = 7.683e-107
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLPAPAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR 151
            MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLPAPAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR
Sbjct:    1 MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLPAPAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR 151
[Close]
BLAST of EWM24345.1 vs. NCBI_GenBank
Match: gi|553192503|ref|XP_005855584.1| (hypothetical protein NGA_0623800 [Nannochloropsis gaditana CCMP526] >gi|422293476|gb|EKU20776.1| hypothetical protein NGA_0623800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 307.76 bits (787), Expect = 5.420e-106
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0 
Query:    1 MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLPAPAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR 151
            MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLP PAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR
Sbjct:    1 MSISTNPVGKVWVENMFLWLAPLLLFIYKMLYEYLPPPAFIACLVIPALYVYRVTKELSPVEAADEMSAKERMAEEMLEELTKEEEVNESKKKKDKNDGKHKKKLQGGGGKSATSAGGTSKGKRQSTGGDEDDEDDMLTRMAQQRAKKAVR 151
The following BLAST results are available for this feature:
BLAST of EWM24345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105739|gb|EWM24345.1|7.683e-107100.00hypothetical protein Naga_100105g11 [Nannochlorops... [more]
gi|553192503|ref|XP_005855584.1|5.420e-10699.34hypothetical protein NGA_0623800 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6347rna6347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications