EWM24331.1, cds6331 (CDS) Nannochloropsis gaditana

Overview
NameEWM24331.1
Unique Namecds6331
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:303494..303719 +
Alignment locationCM002468.1:303866..303936 +
Alignment locationCM002468.1:304091..304311 +
Alignment locationCM002468.1:304634..304835 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24331.1
Productadp-ribose pyrophosphatase
Orig transcript idgnl|cribi|Naga_100105g12.10570.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:303494..303719 +
CM002468.1supercontigCM002468.1:303866..303936 +
CM002468.1supercontigCM002468.1:304091..304311 +
CM002468.1supercontigCM002468.1:304634..304835 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|585105725|gb|EWM24331.1| (adp-ribose pyrophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 490.345 bits (1261), Expect = 2.242e-175
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query:    1 MAYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR 239
            MAYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR
Sbjct:    1 MAYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR 239          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|553192484|ref|XP_005855579.1| (ADP-ribose pyrophosphatase [Nannochloropsis gaditana CCMP526] >gi|422293471|gb|EKU20771.1| ADP-ribose pyrophosphatase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 287.73 bits (735), Expect = 1.307e-96
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
Query:   99 EDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR 239
            +DETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR
Sbjct:   11 QDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLLYRYIRGAGR 151          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|299116220|emb|CBN74569.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 176.792 bits (447), Expect = 1.528e-51
Identity = 96/227 (42.29%), Postives = 139/227 (61.23%), Query Frame = 0
Query:    4 VIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFGDVKQYAPPGASSSSWRWTLASGIAALLL 230
            V+ T +   P FRWVSL+++ + D +G  R WE A R  R++        +GV ++  +S   +K  D I+L+SQ+RPPV  EV+E PAGLVD GED   +A REL EETGF G VT VSPIV  DPG+++A+MR+V + ++GD   NQ P A P++ E IT+ R+P   +   ++ F   GF++DARLY +A+G   G  ++ A  G      RW L   +A+ L+
Sbjct:    9 VLSTTNLDTPDFRWVSLRKILWQDPKGNNRVWECAFRNTRKSE------CDGVAVIVFVSYPVSKKEDEILLISQYRPPVASEVIESPAGLVDAGEDAKEAAERELLEETGFSGKVTSVSPIVPCDPGMTDANMRFVTIEVNGDSEENQNPKARPEDGEFITLRRLPATSMQEGLDEFANAGFQVDARLYAMAVGYTLG--RRAAAAGEGVCPRRW-LGCAVASSLV 226          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|676377675|ref|XP_009032116.1| (hypothetical protein AURANDRAFT_5776, partial [Aureococcus anophagefferens] >gi|323456959|gb|EGB12825.1| hypothetical protein AURANDRAFT_5776, partial [Aureococcus anophagefferens])

HSP 1 Score: 172.94 bits (437), Expect = 8.825e-51
Identity = 99/202 (49.01%), Postives = 128/202 (63.37%), Query Frame = 0
Query:    2 AYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEG-FREQGFEIDARLYGLALGLQFG 202
            A V+  E+    GFRW+ LK+L Y D  GR+R WEMAER  RR A       +GVGIVA++          +VLV+QFRPP+   VLELPAGLVD GE    +A+REL+EETGF G VT VSP+V SDPG+S A+M+ V + +DGD   N +PVA P+E E ITV  VP+  L   +    + +G+ +DARLY  A GL+  
Sbjct:    2 ARVVGVEEEC--GFRWLRLKKLAYVDQTGRRRFWEMAERTTRRGA------VDGVGIVAVVRRRACAP--QVVLVTQFRPPLDGHVLELPAGLVDGGEGAGGAALRELKEETGFVGTVTSVSPVVASDPGMSAANMQLVVVDVDGDAPENLKPVAEPEEGEFITVLLVPLAGLAARLRAEMKARGYHVDARLYAYAAGLELA 193          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|1183324966|gb|ORX54738.1| (hypothetical protein BCR36DRAFT_581630 [Piromyces finnis])

HSP 1 Score: 165.622 bits (418), Expect = 9.044e-48
Identity = 84/187 (44.92%), Postives = 116/187 (62.03%), Query Frame = 0
Query:   16 RWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQFG 202
            +WV+L +++Y D  G+KR WEM  R  R+         + V I  I+S +  K  +  +LVSQFRPPVGK   E PAGL+D+GE    +A+REL+EETG+ G+V  VSPI++SDPGL+NA+M+ V M +D  L  NQ  VA+PDE E I V  +PV  L + +    +    +DARL   A GL+F 
Sbjct:   18 KWVALDKIEYQDPSGKKRVWEMCHRTSRKG------DCDAVAIFTILSATEDKP-EETLLVSQFRPPVGKLTFEFPAGLIDEGETAAQAAVRELKEETGYCGVVREVSPIIFSDPGLTNANMKLVVMDVDRSLEINQNVVAVPDEGEFIDVFHIPVNNLYDFLIEKEKTTHAVDARLLHFAYGLKFA 197          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|729184537|emb|CEJ90391.1| (hypothetical protein VHEMI06179 [Torrubiella hemipterigena])

HSP 1 Score: 164.081 bits (414), Expect = 3.716e-47
Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 0
Query:    2 AYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGL 199
            A ++  E       RWV+LKR+ Y D +G+ RTWE AER+ R          +GVGI+AI+S     D  HI+L  Q+RPP+ K  +E+PAGL+D+GE    +A+RELREETG+ G V  VSP++++DPG  N ++  V + ID  L  NQ PV   ++DE I V  VPV RL  E       G+ IDAR+   A G+
Sbjct:    6 AKLVSLEPLDNKDARWVTLKRINYTDQQGKARTWETAERLTRPAGG-----VDGVGILAILSKP---DGKHILLQKQYRPPIDKVTIEIPAGLIDEGETPEQAAVRELREETGYMGNVADVSPVMFNDPGFCNTNLNMVQVDIDMSLEVNQNPVPQLEDDECIEVFSVPVDRLWQECCEMENNGYGIDARVGTFAQGI 195          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|1183357176|gb|ORX84735.1| (hypothetical protein BCR32DRAFT_260924 [Anaeromyces robustus])

HSP 1 Score: 159.458 bits (402), Expect = 2.350e-45
Identity = 81/185 (43.78%), Postives = 113/185 (61.08%), Query Frame = 0
Query:   16 RWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGLQ 200
            +WV+L +++Y D  G+KR WEM  R  R+         + V I  I+S +  K  + + LVSQFRPPVGK   E PAGL+D+ E    +A+REL+EETG+ G+V  V+PI++SDPGL+NA+M+ V M +D  L  NQ  VA+PDE E I V  +PV +L + +         +DARL   A GL 
Sbjct:   18 KWVALDKIEYQDPSGKKRVWEMCHRTSRKG------DCDAVVIFTILSATKDKPKETL-LVSQFRPPVGKLTFEFPAGLIDENETAEQAAVRELKEETGYHGVVREVTPIIFSDPGLTNANMKLVVMDVDRSLEINQNVVAVPDEGEFIDVFHIPVDKLYSFLIEKANTTHAVDARLLHFAFGLN 195          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|927758386|gb|KPA41579.1| (adp-ribose pyrophosphatase [Fusarium langsethiae])

HSP 1 Score: 159.458 bits (402), Expect = 2.428e-45
Identity = 90/204 (44.12%), Postives = 122/204 (59.80%), Query Frame = 0
Query:    1 MAYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPA--NGVGIVAIISTSFAKDNDH---IVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGL 199
            +A    TE  S     WVSLK++ Y D+RG++RTWE AER+ R      P  A  +GVGIVAI+      D+ H   IVL  Q+RPPV K V+E+PAGL+D+GE     A+RELREETG+ G+ T  SPI+++DPG  N +++ V + ID DL  NQ P    ++ E I    V +  L  E E   ++G  IDAR+  LA G+
Sbjct:    5 VATATSTEPLSEADAHWVSLKKITYTDSRGQQRTWESAERLTR------PKDALVDGVGIVAIL------DHRHGPEIVLQKQYRPPVDKVVIEVPAGLIDEGETAEECAVRELREETGYIGVATETSPIMFNDPGFCNTNLKMVHVSIDMDLKENQDPKPQLEDGEFIETFTVKLADLWKECEKLEKEGHAIDARVATLAEGI 196          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|1198304816|gb|OUM61639.1| (hypothetical protein PIROE2DRAFT_45041 [Piromyces sp. E2])

HSP 1 Score: 155.606 bits (392), Expect = 4.687e-44
Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 0
Query:   16 RWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPANGVGIVAIISTSFAKDNDHIVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLN 176
            +WV+L +++Y D  G+KR WEM  R  R+         + V I  I+S +  K  + + LVSQFRPPVGK   E PAGL+D+GE    +A+REL+EETG+ G+V  VSPI++SDPGL+NA+M+ V M +D  L  NQ  VA+PD+ E I V  +P+  L N
Sbjct:   18 KWVALDKIEYQDPSGKKRVWEMCHRTSRKGD------CDAVAIFTILSATKDKPQETL-LVSQFRPPVGKLTFEFPAGLIDEGETAAQAAVRELKEETGYHGVVREVSPIIFSDPGLTNANMKLVVMDVDRSLDINQNVVAVPDDGEFIDVFHIPINNLYN 171          
BLAST of EWM24331.1 vs. NCBI_GenBank
Match: gi|1040033501|gb|OBS26226.1| (hypothetical protein FPOA_00167 [Fusarium poae])

HSP 1 Score: 155.992 bits (393), Expect = 6.385e-44
Identity = 90/203 (44.33%), Postives = 121/203 (59.61%), Query Frame = 0
Query:    2 AYVIKTEDHSAPGFRWVSLKRLQYCDARGRKRTWEMAERIQRRTASEGPPPA--NGVGIVAIISTSFAKDNDH---IVLVSQFRPPVGKEVLELPAGLVDDGEDETTSAIRELREETGFEGMVTHVSPIVYSDPGLSNASMRYVFMRIDGDLGSNQQPVAMPDEDEIITVHRVPVKRLLNEVEGFREQGFEIDARLYGLALGL 199
            A    TE  S    RWVSLK++ Y D+RG +RTWE AER+ R      P  A  +GVGIVAI+      D+ H   IVL  Q+RPPV K V+E+PAGL+D+ E     A+RELREETG+ G+VT  SPI+++DPG  N +++ V + ID +L  NQ P    ++ E I    V +  L  E E   ++G  IDAR+  LA G+
Sbjct:    6 AVTTSTEPLSNEDARWVSLKKITYSDSRGVQRTWESAERLTR------PKDALIDGVGIVAIL------DHRHGPEIVLQKQYRPPVDKVVIEVPAGLIDENETAEECAVRELREETGYVGVVTETSPIMFNDPGFCNTNLKMVHVSIDMNLKENQDPKPNLEDGEFIETFTVKLTDLWKECERLEKEGHVIDARVATLAEGI 196          
The following BLAST results are available for this feature:
BLAST of EWM24331.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105725|gb|EWM24331.1|2.242e-175100.00adp-ribose pyrophosphatase [Nannochloropsis gadita... [more]
gi|553192484|ref|XP_005855579.1|1.307e-9699.29ADP-ribose pyrophosphatase [Nannochloropsis gadita... [more]
gi|299116220|emb|CBN74569.1|1.528e-5142.29conserved unknown protein [Ectocarpus siliculosus][more]
gi|676377675|ref|XP_009032116.1|8.825e-5149.01hypothetical protein AURANDRAFT_5776, partial [Aur... [more]
gi|1183324966|gb|ORX54738.1|9.044e-4844.92hypothetical protein BCR36DRAFT_581630 [Piromyces ... [more]
gi|729184537|emb|CEJ90391.1|3.716e-4743.43hypothetical protein VHEMI06179 [Torrubiella hemip... [more]
gi|1183357176|gb|ORX84735.1|2.350e-4543.78hypothetical protein BCR32DRAFT_260924 [Anaeromyce... [more]
gi|927758386|gb|KPA41579.1|2.428e-4544.12adp-ribose pyrophosphatase [Fusarium langsethiae][more]
gi|1198304816|gb|OUM61639.1|4.687e-4446.58hypothetical protein PIROE2DRAFT_45041 [Piromyces ... [more]
gi|1040033501|gb|OBS26226.1|6.385e-4444.33hypothetical protein FPOA_00167 [Fusarium poae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6346rna6346Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications