EWM24336.1, cds6329 (CDS) Nannochloropsis gaditana

Overview
NameEWM24336.1
Unique Namecds6329
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:299984..300110 -
Alignment locationCM002468.1:299520..299792 -
Alignment locationCM002468.1:299163..299365 -

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Properties
Property NameValue
Protein idEWM24336.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100105g14.10575.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:299984..300110 -
CM002468.1supercontigCM002468.1:299520..299792 -
CM002468.1supercontigCM002468.1:299163..299365 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM24336.1 vs. NCBI_GenBank
Match: gi|553192514|ref|XP_005855587.1| (hypothetical protein NGA_0624100 [Nannochloropsis gaditana CCMP526] >gi|422293479|gb|EKU20779.1| hypothetical protein NGA_0624100 [Nannochloropsis gaditana CCMP526] >gi|585105730|gb|EWM24336.1| hypothetical protein Naga_100105g14 [Nannochloropsis gaditana])

HSP 1 Score: 412.92 bits (1060), Expect = 4.600e-146
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 
Query:    1 MWPFSVNSKLCGVTRRCLIIGIASVLLPVIVIASLVGVYYPKAPEIRATTTEINSLKINGMESVSVDADVDLEIVNKNKNYPIAFDPVELDFYFPSSPESRVGTGVLEGGVIPGGETTTRKLHAVFDAPWSMLGASFLRNMNQGATTLLVKGHVLGFSTILKSDFRLSSELECILSYTWDDQKTHKDCHSTKKVSLARSK 200
            MWPFSVNSKLCGVTRRCLIIGIASVLLPVIVIASLVGVYYPKAPEIRATTTEINSLKINGMESVSVDADVDLEIVNKNKNYPIAFDPVELDFYFPSSPESRVGTGVLEGGVIPGGETTTRKLHAVFDAPWSMLGASFLRNMNQGATTLLVKGHVLGFSTILKSDFRLSSELECILSYTWDDQKTHKDCHSTKKVSLARSK
Sbjct:    1 MWPFSVNSKLCGVTRRCLIIGIASVLLPVIVIASLVGVYYPKAPEIRATTTEINSLKINGMESVSVDADVDLEIVNKNKNYPIAFDPVELDFYFPSSPESRVGTGVLEGGVIPGGETTTRKLHAVFDAPWSMLGASFLRNMNQGATTLLVKGHVLGFSTILKSDFRLSSELECILSYTWDDQKTHKDCHSTKKVSLARSK 200
The following BLAST results are available for this feature:
BLAST of EWM24336.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553192514|ref|XP_005855587.1|4.600e-146100.00hypothetical protein NGA_0624100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6344rna6344Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications