EWM24340.1, cds6327 (CDS) Nannochloropsis gaditana

Overview
NameEWM24340.1
Unique Namecds6327
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:295633..295750 -
Alignment locationCM002468.1:295269..295480 -
Alignment locationCM002468.1:294632..295141 -
Alignment locationCM002468.1:294336..294470 -

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Properties
Property NameValue
Protein idEWM24340.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100105g16.10579.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:295633..295750 -
CM002468.1supercontigCM002468.1:295269..295480 -
CM002468.1supercontigCM002468.1:294632..295141 -
CM002468.1supercontigCM002468.1:294336..294470 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24340.1 vs. NCBI_GenBank
Match: gi|585105734|gb|EWM24340.1| (hypothetical protein Naga_100105g16 [Nannochloropsis gaditana])

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0 
Query:    1 MNAIANGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETGDSTAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK 324
            MNAIANGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETGDSTAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK
Sbjct:    1 MNAIANGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETGDSTAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK 324
[Close]
BLAST of EWM24340.1 vs. NCBI_GenBank
Match: gi|553192522|ref|XP_005855589.1| (hypothetical protein NGA_0624300 [Nannochloropsis gaditana CCMP526] >gi|422293481|gb|EKU20781.1| hypothetical protein NGA_0624300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 322/324 (99.38%), Postives = 322/324 (99.38%), Query Frame = 0 
Query:    1 MNAIANGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETGDSTAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK 324
            MNAI NGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETG STAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK
Sbjct:    1 MNAITNGRMQWLSLSMLALATVGSAFIFPASRPGTRLVAEPLTKLNVVVSETTREGVPMPEPNVKPATDKLFVYLWIDHLGNRVYRATRNIGASPRRIQLWNPLASDADQAYPETGVSTAPSFTKYEVLGDDNLDAWVESGFGEFDDVEPSPVAYTIEGAEEGGARGEMEGEGQREEAKELTSEEIEASINAYNEYYPPASFDALVTAMQASWRTIILSRGKQGAKAMREFYRDLHKAHPELEQKVWIMETHATRSPVPEDPDTYNHWMSDEDILKMARVATDGHDDVVEFSGLEFEDSMDGIKGEDWVTIPPPLSWFKDEAKK 324
The following BLAST results are available for this feature:
BLAST of EWM24340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105734|gb|EWM24340.1|0.000e+0100.00hypothetical protein Naga_100105g16 [Nannochlorops... [more]
gi|553192522|ref|XP_005855589.1|0.000e+099.38hypothetical protein NGA_0624300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6342rna6342Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications