EWM24347.1, cds6325 (CDS) Nannochloropsis gaditana

Overview
NameEWM24347.1
Unique Namecds6325
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:290409..290555 +
Alignment locationCM002468.1:290722..291482 +
Alignment locationCM002468.1:291647..292151 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24347.1
Productphytanoyl- dioxygenase domain-containing protein
Orig transcript idgnl|cribi|Naga_100105g18.10586.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:290409..290555 +
CM002468.1supercontigCM002468.1:290722..291482 +
CM002468.1supercontigCM002468.1:291647..292151 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
Homology
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|585105741|gb|EWM24347.1| (phytanoyl- dioxygenase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 961.059 bits (2483), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query:    1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE 470
            MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE
Sbjct:    1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE 470          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|553187041|ref|XP_005854538.1| (phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >gi|422294520|gb|EKU21820.1| phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 887.486 bits (2292), Expect = 0.000e+0
Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 0
Query:    1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDL 434
            MDVVDNAGS AFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQP MDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDA TPVISGPWMLRWDL
Sbjct:    1 MDVVDNAGSCAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPAMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDASTPVISGPWMLRWDL 434          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|514695629|ref|XP_004995385.1| (hypothetical protein PTSG_12054 [Salpingoeca rosetta] >gi|326437451|gb|EGD83021.1| hypothetical protein PTSG_12054 [Salpingoeca rosetta])

HSP 1 Score: 319.701 bits (818), Expect = 4.632e-102
Identity = 174/407 (42.75%), Postives = 222/407 (54.55%), Query Frame = 0
Query:   38 PYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444
            PY T GPL + E + FF +G+++KRD+  P  L     +++ +VD +A  L  AG+ITD+C   GF+ R+ A+E Q P  SVLLHK   L P  R LWS P LLDIAQQ++G     +A HPVWNLR K PQ   + VPWHQD AYLD E  +TL                                 Q+TAW+PLLDAN  NGC+QV+R  H++GR A HTCC GGTWYV  DL +      ++C   +   TC VP GSVL L+NLIPHRSL N+S +IRWS DLRWQ   EP GF GIK+ + MR GG      + + ++WD +   DR    ++AA R  R+   G DG +      + E E                    I GPWM RW + HHN HT   
Sbjct:   44 PY-TPGPLTEAEFEQFFTDGFVLKRDILTPDLLHAAQGEVEKEVDEVARALFAAGKITDLCEKEGFFSRLTALEKQFPHVSVLLHKRGVLRPGVRQLWSAPVLLDIAQQIIGPD---IAAHPVWNLRCKTPQQEQATVPWHQDIAYLDEECWSTL---------------------------------QLTAWVPLLDANEENGCMQVVRGGHRTGRAAHHTCCAGGTWYV--DLPEEQIEDVLECNMATDVVTCPVPKGSVLLLNNLIPHRSLNNMSPNIRWSFDLRWQSPHEPTGFSGIKETLPMRMGGN-----KDFNINWDKWAREDRHTGMTEAAQR--RSAAAGADGTRENTTSSDDEKE----------------FDTTIVGPWMHRWPITHHNRHTRAL 388          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|545364141|ref|XP_005647135.1| (hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169] >gi|384249109|gb|EIE22591.1| hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 318.931 bits (816), Expect = 5.335e-102
Identity = 177/407 (43.49%), Postives = 229/407 (56.27%), Query Frame = 0
Query:   37 RPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAA--AAASDALTPVISGPWMLRWDLVHHNAHT 441
            RP+ T+G L ++EL  ++ EG+++K+D+ +  +L  V + I+  VD +A  L +AG+I D+C    F+ R+  +EAQ P ASVL+HK   LPP    LWS P L+  A+Q LGG    VAGHPVWNLR K PQ   + VPWHQD  YL PE+   L                                 QVTAWIP+L A   NGC+QV+R  H++G+T +H+CCVGGTWYV+MD +DA   LG+D   +    TCEVP GSVLFL+NLIPHRSL N+S  IRWS+DLRWQ    P GF+G+KD + M + G+      GY  DW  + + DR   Q +AA  A +  E                       V AAA  A A   L   ISGPWM RW+LVHHN H 
Sbjct:   19 RPF-TEGVLTEEELQQYWDEGFVVKKDLLSKEQLDAVKNAINRSVDKVAELLHKAGKIQDLCEDADFFTRLTKLEAQFPSASVLVHKQGILPPEIATLWSSPALMSAAKQFLGGD---VAGHPVWNLRAKTPQQEQATVPWHQDNGYLHPESWEVL---------------------------------QVTAWIPMLTATPRNGCMQVIRGGHRAGKTVKHSCCVGGTWYVQMDEEDAERELGVDMAADVV--TCEVPFGSVLFLNNLIPHRSLDNMSDQIRWSLDLRWQRPGLPNGFYGLKDCITMAKSGE-----PGYAPDWTDWGSQDRTPMQ-KAAISADKIAE-----------------------VTAAADVAQADKELDTTISGPWMDRWELVHHNRHV 357          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|261289285|ref|XP_002603086.1| (hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae] >gi|229288402|gb|EEN59097.1| hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae])

HSP 1 Score: 317.005 bits (811), Expect = 3.575e-101
Identity = 172/405 (42.47%), Postives = 220/405 (54.32%), Query Frame = 0
Query:   43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTRE--GYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREI-EGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444
            G L  K++D FF+EGY++ +D F P ELQPV D ++  VD LA K+ +AG+I D     G ++R+  +E + PG +V+LHK   LP +FR LW++ RLL+  +Q +G P++  AGHPVWNLR K P      VPWHQD AYL P +  TL                                 Q TAWIPLLDA   NGC+Q+MR  H+ G TA H CC GGTWYVE+  +D    LG D  ++    TCEVP G VLFL+N +PHRSL N S  IRWS+DLRWQD  +P+GFWG ++ VLMR       T E  GY   WDGF+ V +                       +   EI +GE +   +          D   P I GPWMLRW +VHHN HT G 
Sbjct:   39 GQLTAKQVDQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDKLADKMHKAGKIKDTHKGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNERLLNAVEQFVG-PNI--AGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLDATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLGCDLENDIV--TCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR-------TEEDPGYKPVWDGFVDVSK----------------------HIRYEEIMKGEEQEHNE----------DEFDPTIQGPWMLRWKIVHHNRHTKGI 366          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|261289279|ref|XP_002603083.1| (hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae] >gi|229288399|gb|EEN59094.1| hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae])

HSP 1 Score: 315.464 bits (807), Expect = 1.338e-100
Identity = 169/403 (41.94%), Postives = 218/403 (54.09%), Query Frame = 0
Query:   43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREI-EGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444
            G L  K++D FF+EGY++ +D F P ELQPV D ++  VD LA K+ +AG+I D     G ++R+  +E + PG +V+LHK   LP +FR LW++ RLL+  +Q +G P++  AGHPVWNLR K P      VPWHQD AYL P +  TL                                 Q TAWIPLL+A   NGC+Q+MR  H+ G TA H CC GGTWYVE+  +D    LG D  ++    TCEVP G VLFL+N +PHRSL N S  IRWS+DLRWQD  +P+GFWG ++ VLMR          GY   WDGF+ V +                       +   EI +GE +   +          D   P I GPWMLRW +VHHN HT G 
Sbjct:   39 GQLTAKQVDQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDKLADKMHKAGKIKDTHKGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNERLLNAVEQFVG-PNI--AGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLNATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLGCDLENDIV--TCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR-----TAEDPGYKPVWDGFVDVSK----------------------HIRYEEIMKGEEQEHNE----------DEFDPTIQGPWMLRWKIVHHNRHTKGI 366          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|919069260|ref|XP_013416110.1| (PREDICTED: uncharacterized protein LOC106177775 [Lingula anatina])

HSP 1 Score: 310.071 bits (793), Expect = 9.160e-99
Identity = 162/412 (39.32%), Postives = 222/412 (53.88%), Query Frame = 0
Query:   43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGG 454
            G LN+++L  F++EGY++  + F P EL+PV   +D+ V+ LA KL +AG++  +    G + R+  +E + PGAS+LLHKN  +P + R LWS+ RLL++ +QL+G     + GHPVWNLR K P+  ++VVPWHQD+AY D E+        R+  P                          TAWIPLLDAN  NGC+QV++  H+ G+ A HTCC G TWYV +D +     L +D  ++    T  VP G  L  +NL PHRSL N S+ IRWS DLRW    +P  FWG+KD VL+R   K+   +    VDW+ FLAVDR   QS+A  + +                                    D     ISGPWM +WD+V+HN HT GF   A G+AG 
Sbjct:   31 GQLNEEQLKQFYEEGYILVEEFFTPEELEPVRHAVDNLVEELAQKLYKAGKVKKLYSDYGLFERLTMLEKEFPGASILLHKNGKMPQAVRDLWSNERLLNVVEQLIGP---DIVGHPVWNLRTKTPKNDATVVPWHQDSAYFDNESY-------RMMIP--------------------------TAWIPLLDANENNGCMQVVKNGHKKGKVATHTCCAGPTWYVMLDEEVMEKSLDVDLNEDLV--TVPVPYGGFLLFNNLTPHRSLNNYSSVIRWSFDLRWSSLHDPIAFWGLKDGVLLR-SSKDPNLK----VDWEPFLAVDRTTVQSKALNKEE------------------------------------DEFNTTISGPWMKKWDIVNHNRHTKGFA--ATGQAGN 361          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|1126191105|ref|XP_019628497.1| (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri])

HSP 1 Score: 310.457 bits (794), Expect = 1.080e-98
Identity = 168/404 (41.58%), Postives = 214/404 (52.97%), Query Frame = 0
Query:   43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTRE--GYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444
            G L +K+++ FF+EGY++ +D F P ELQPV D ++  VD LA K+  AG+I D     G ++R+  +E + PG +V+LHK   LP +FR LW++ RLL+  +Q +G     +AGHPVWNLR K P      VPWHQD AYL P +  TL                                 Q TAWIPLL+A   NGC+Q++R  H+ G TA H CC GGTWYVE+  DD    LG D + +    TCEVP G VLFL+N +PHRSL N S  IRWS+DLRWQD  +P+GFWG K  VLMR       T E  GY   W+GF  V +    +Q   + K   +   D                            D   P I GPWMLRW +VHHN HT G 
Sbjct:   39 GQLTEKQVNQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDRLAEKMYAAGKIKDTHNGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNDRLLNAVEQFVGPD---IAGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLNATRENGCMQIVRGGHKKGITAPHVCCAGGTWYVELAEDDMEKTLGCDMKKDVV--TCEVPYGGVLFLNNCVPHRSLENNSNDIRWSLDLRWQDPAKPSGFWGDKKPVLMR-------TEEDPGYKPVWEGFADVSK---HTQYDDKMKDTDQEAND----------------------------DEFDPTIQGPWMLRWKIVHHNRHTKGL 366          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|1126224604|ref|XP_019646668.1| (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri])

HSP 1 Score: 310.457 bits (794), Expect = 1.105e-98
Identity = 168/417 (40.29%), Postives = 222/417 (53.24%), Query Frame = 0
Query:   31 PPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDR-GEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGG 446
            PPP  T      G L+++++  FF+EGY++ +D F P ELQPV D ++  VD LA ++ +AGRI D     G ++R+  +  + PGA+V+LHK   LP +FR LWS+ RLL++ +Q +G     +AGHP+WNLR K P+     VPWHQD AYL  ++  TL                                 Q TAWIPLLDAN  NGC+QV+R  H+ G T +H CCVGGTWYVE+  D+  + LG D +++    TCEVP G VLFL+N IPHRSL N +  IRWS+DLRWQ   +P GF GIKD++ MR              DW+ F +VDR G  Q Q                                  +   A A D     I GPWMLRW++V+HN HT    G
Sbjct:   28 PPPQPTE--KKPGQLSQEQVRQFFEEGYVLVKDYFKPEELQPVRDAVEGLVDDLAQRMYKAGRIKDTHKDAGLFQRLTLLNQEYPGAAVVLHKKGKLPQAFRDLWSNERLLNVMEQFIGPE---IAGHPIWNLRTKTPRNEEVTVPWHQDNAYLGVQSLGTL---------------------------------QPTAWIPLLDANTDNGCMQVVRGGHRKGITGKHVCCVGGTWYVELPEDEIQNTLGCDLKNDIV--TCEVPYGGVLFLNNAIPHRSLENNTDQIRWSLDLRWQHPDKPCGFEGIKDVIPMR-----SAKYPDLKPDWEKFESVDRTGNQQRQ----------------------------------MNNKAGAEDEFDTTIQGPWMLRWEIVNHNKHTRSILG 365          
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|780103995|ref|XP_003726259.2| (PREDICTED: phytanoyl-CoA dioxygenase, partial [Strongylocentrotus purpuratus])

HSP 1 Score: 308.916 bits (790), Expect = 3.847e-98
Identity = 175/428 (40.89%), Postives = 235/428 (54.91%), Query Frame = 0
Query:   21 TRSAATMNVDPPPWLTRP----YSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444
            +R   + + +P  +LT P        G L   +L  +F+EG L+  D F P EL PV + + S VD + +KL  AG+I D   ++  ++RM  +E + PGA+VLLHK   LP SF+ LWSD RLL++ +QL+G P++  AGHPVWNLRVK PQ   +VVPWHQD AYLDP A   L                                 QVTAWIPLLD  A NGC+QV R+ H+ G TA+H CCVGGTWYVE++++D    LG+D   +    TC++  G VLF++N +PHRSL N+S +IRWS+DLRWQ   +P GF+GIKD VLMR  G        Y  +WD F + D      +A +  K           VE +  + + ++                   I+GPWM RW+LV HN HT  F
Sbjct:    1 SRCRVSRDSNPDIYLTVPPQKGERKPGQLTDAQLKQYFEEGCLLVPDFFKPEELDPVREGVKSSVDDIVNKLYDAGKIKDKYENVDLFQRMTCVEKEFPGAAVLLHKTGSLPRSFKDLWSDARLLNVMEQLIG-PNI--AGHPVWNLRVKTPQNEEAVVPWHQDNAYLDPSALNVL---------------------------------QVTAWIPLLDVTAKNGCMQVARKGHRKGVTAKHRCCVGGTWYVEVEVEDMVETLGVDMDKDLV--TCDMSYGGVLFMNNCVPHRSLTNLSNNIRWSLDLRWQRPDKPNGFYGIKDSVLMRTEGD-----PNYKPNWDEFESTDHHSVAKEAFSEVKDPN--------VEIKSDDVDFDT------------------TITGPWMQRWELVFHNRHTQNF 359          
The following BLAST results are available for this feature:
BLAST of EWM24347.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105741|gb|EWM24347.1|0.000e+0100.00phytanoyl- dioxygenase domain-containing protein [... [more]
gi|553187041|ref|XP_005854538.1|0.000e+099.31phytanoyl- dioxygenase domain-containing 1-like pr... [more]
gi|514695629|ref|XP_004995385.1|4.632e-10242.75hypothetical protein PTSG_12054 [Salpingoeca roset... [more]
gi|545364141|ref|XP_005647135.1|5.335e-10243.49hypothetical protein COCSUDRAFT_47613 [Coccomyxa s... [more]
gi|261289285|ref|XP_002603086.1|3.575e-10142.47hypothetical protein BRAFLDRAFT_63281 [Branchiosto... [more]
gi|261289279|ref|XP_002603083.1|1.338e-10041.94hypothetical protein BRAFLDRAFT_63284 [Branchiosto... [more]
gi|919069260|ref|XP_013416110.1|9.160e-9939.32PREDICTED: uncharacterized protein LOC106177775 [L... [more]
gi|1126191105|ref|XP_019628497.1|1.080e-9841.58PREDICTED: phytanoyl-CoA dioxygenase domain-contai... [more]
gi|1126224604|ref|XP_019646668.1|1.105e-9840.29PREDICTED: phytanoyl-CoA dioxygenase domain-contai... [more]
gi|780103995|ref|XP_003726259.2|3.847e-9840.89PREDICTED: phytanoyl-CoA dioxygenase, partial [Str... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6340rna6340Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications