EWM24347.1, cds6325 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|585105741|gb|EWM24347.1| (phytanoyl- dioxygenase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 961.059 bits (2483), Expect = 0.000e+0 Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0 Query: 1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE 470 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE Sbjct: 1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGGREGGGARGMAQGLTEE 470
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|553187041|ref|XP_005854538.1| (phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >gi|422294520|gb|EKU21820.1| phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 887.486 bits (2292), Expect = 0.000e+0 Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 0 Query: 1 MDVVDNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDL 434 MDVVDNAGS AFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQP MDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDA TPVISGPWMLRWDL Sbjct: 1 MDVVDNAGSCAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPAMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDASTPVISGPWMLRWDL 434
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|514695629|ref|XP_004995385.1| (hypothetical protein PTSG_12054 [Salpingoeca rosetta] >gi|326437451|gb|EGD83021.1| hypothetical protein PTSG_12054 [Salpingoeca rosetta]) HSP 1 Score: 319.701 bits (818), Expect = 4.632e-102 Identity = 174/407 (42.75%), Postives = 222/407 (54.55%), Query Frame = 0 Query: 38 PYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444 PY T GPL + E + FF +G+++KRD+ P L +++ +VD +A L AG+ITD+C GF+ R+ A+E Q P SVLLHK L P R LWS P LLDIAQQ++G +A HPVWNLR K PQ + VPWHQD AYLD E +TL Q+TAW+PLLDAN NGC+QV+R H++GR A HTCC GGTWYV DL + ++C + TC VP GSVL L+NLIPHRSL N+S +IRWS DLRWQ EP GF GIK+ + MR GG + + ++WD + DR ++AA R R+ G DG + + E E I GPWM RW + HHN HT Sbjct: 44 PY-TPGPLTEAEFEQFFTDGFVLKRDILTPDLLHAAQGEVEKEVDEVARALFAAGKITDLCEKEGFFSRLTALEKQFPHVSVLLHKRGVLRPGVRQLWSAPVLLDIAQQIIGPD---IAAHPVWNLRCKTPQQEQATVPWHQDIAYLDEECWSTL---------------------------------QLTAWVPLLDANEENGCMQVVRGGHRTGRAAHHTCCAGGTWYV--DLPEEQIEDVLECNMATDVVTCPVPKGSVLLLNNLIPHRSLNNMSPNIRWSFDLRWQSPHEPTGFSGIKETLPMRMGGN-----KDFNINWDKWAREDRHTGMTEAAQR--RSAAAGADGTRENTTSSDDEKE----------------FDTTIVGPWMHRWPITHHNRHTRAL 388
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|545364141|ref|XP_005647135.1| (hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169] >gi|384249109|gb|EIE22591.1| hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 318.931 bits (816), Expect = 5.335e-102 Identity = 177/407 (43.49%), Postives = 229/407 (56.27%), Query Frame = 0 Query: 37 RPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAA--AAASDALTPVISGPWMLRWDLVHHNAHT 441 RP+ T+G L ++EL ++ EG+++K+D+ + +L V + I+ VD +A L +AG+I D+C F+ R+ +EAQ P ASVL+HK LPP LWS P L+ A+Q LGG VAGHPVWNLR K PQ + VPWHQD YL PE+ L QVTAWIP+L A NGC+QV+R H++G+T +H+CCVGGTWYV+MD +DA LG+D + TCEVP GSVLFL+NLIPHRSL N+S IRWS+DLRWQ P GF+G+KD + M + G+ GY DW + + DR Q +AA A + E V AAA A A L ISGPWM RW+LVHHN H Sbjct: 19 RPF-TEGVLTEEELQQYWDEGFVVKKDLLSKEQLDAVKNAINRSVDKVAELLHKAGKIQDLCEDADFFTRLTKLEAQFPSASVLVHKQGILPPEIATLWSSPALMSAAKQFLGGD---VAGHPVWNLRAKTPQQEQATVPWHQDNGYLHPESWEVL---------------------------------QVTAWIPMLTATPRNGCMQVIRGGHRAGKTVKHSCCVGGTWYVQMDEEDAERELGVDMAADVV--TCEVPFGSVLFLNNLIPHRSLDNMSDQIRWSLDLRWQRPGLPNGFYGLKDCITMAKSGE-----PGYAPDWTDWGSQDRTPMQ-KAAISADKIAE-----------------------VTAAADVAQADKELDTTISGPWMDRWELVHHNRHV 357
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|261289285|ref|XP_002603086.1| (hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae] >gi|229288402|gb|EEN59097.1| hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae]) HSP 1 Score: 317.005 bits (811), Expect = 3.575e-101 Identity = 172/405 (42.47%), Postives = 220/405 (54.32%), Query Frame = 0 Query: 43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTRE--GYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREI-EGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444 G L K++D FF+EGY++ +D F P ELQPV D ++ VD LA K+ +AG+I D G ++R+ +E + PG +V+LHK LP +FR LW++ RLL+ +Q +G P++ AGHPVWNLR K P VPWHQD AYL P + TL Q TAWIPLLDA NGC+Q+MR H+ G TA H CC GGTWYVE+ +D LG D ++ TCEVP G VLFL+N +PHRSL N S IRWS+DLRWQD +P+GFWG ++ VLMR T E GY WDGF+ V + + EI +GE + + D P I GPWMLRW +VHHN HT G Sbjct: 39 GQLTAKQVDQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDKLADKMHKAGKIKDTHKGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNERLLNAVEQFVG-PNI--AGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLDATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLGCDLENDIV--TCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR-------TEEDPGYKPVWDGFVDVSK----------------------HIRYEEIMKGEEQEHNE----------DEFDPTIQGPWMLRWKIVHHNRHTKGI 366
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|261289279|ref|XP_002603083.1| (hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae] >gi|229288399|gb|EEN59094.1| hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae]) HSP 1 Score: 315.464 bits (807), Expect = 1.338e-100 Identity = 169/403 (41.94%), Postives = 218/403 (54.09%), Query Frame = 0 Query: 43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREI-EGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444 G L K++D FF+EGY++ +D F P ELQPV D ++ VD LA K+ +AG+I D G ++R+ +E + PG +V+LHK LP +FR LW++ RLL+ +Q +G P++ AGHPVWNLR K P VPWHQD AYL P + TL Q TAWIPLL+A NGC+Q+MR H+ G TA H CC GGTWYVE+ +D LG D ++ TCEVP G VLFL+N +PHRSL N S IRWS+DLRWQD +P+GFWG ++ VLMR GY WDGF+ V + + EI +GE + + D P I GPWMLRW +VHHN HT G Sbjct: 39 GQLTAKQVDQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDKLADKMHKAGKIKDTHKGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNERLLNAVEQFVG-PNI--AGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLNATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLGCDLENDIV--TCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR-----TAEDPGYKPVWDGFVDVSK----------------------HIRYEEIMKGEEQEHNE----------DEFDPTIQGPWMLRWKIVHHNRHTKGI 366
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|919069260|ref|XP_013416110.1| (PREDICTED: uncharacterized protein LOC106177775 [Lingula anatina]) HSP 1 Score: 310.071 bits (793), Expect = 9.160e-99 Identity = 162/412 (39.32%), Postives = 222/412 (53.88%), Query Frame = 0 Query: 43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGGRAGGRAGG 454 G LN+++L F++EGY++ + F P EL+PV +D+ V+ LA KL +AG++ + G + R+ +E + PGAS+LLHKN +P + R LWS+ RLL++ +QL+G + GHPVWNLR K P+ ++VVPWHQD+AY D E+ R+ P TAWIPLLDAN NGC+QV++ H+ G+ A HTCC G TWYV +D + L +D ++ T VP G L +NL PHRSL N S+ IRWS DLRW +P FWG+KD VL+R K+ + VDW+ FLAVDR QS+A + + D ISGPWM +WD+V+HN HT GF A G+AG Sbjct: 31 GQLNEEQLKQFYEEGYILVEEFFTPEELEPVRHAVDNLVEELAQKLYKAGKVKKLYSDYGLFERLTMLEKEFPGASILLHKNGKMPQAVRDLWSNERLLNVVEQLIGP---DIVGHPVWNLRTKTPKNDATVVPWHQDSAYFDNESY-------RMMIP--------------------------TAWIPLLDANENNGCMQVVKNGHKKGKVATHTCCAGPTWYVMLDEEVMEKSLDVDLNEDLV--TVPVPYGGFLLFNNLTPHRSLNNYSSVIRWSFDLRWSSLHDPIAFWGLKDGVLLR-SSKDPNLK----VDWEPFLAVDRTTVQSKALNKEE------------------------------------DEFNTTISGPWMKKWDIVNHNRHTKGFA--ATGQAGN 361
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|1126191105|ref|XP_019628497.1| (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri]) HSP 1 Score: 310.457 bits (794), Expect = 1.080e-98 Identity = 168/404 (41.58%), Postives = 214/404 (52.97%), Query Frame = 0 Query: 43 GPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTRE--GYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444 G L +K+++ FF+EGY++ +D F P ELQPV D ++ VD LA K+ AG+I D G ++R+ +E + PG +V+LHK LP +FR LW++ RLL+ +Q +G +AGHPVWNLR K P VPWHQD AYL P + TL Q TAWIPLL+A NGC+Q++R H+ G TA H CC GGTWYVE+ DD LG D + + TCEVP G VLFL+N +PHRSL N S IRWS+DLRWQD +P+GFWG K VLMR T E GY W+GF V + +Q + K + D D P I GPWMLRW +VHHN HT G Sbjct: 39 GQLTEKQVNQFFEEGYVLVKDFFTPEELQPVRDAVEDLVDRLAEKMYAAGKIKDTHNGAGLFQRLTLLEKEFPGTAVILHKWGKLPQAFRDLWTNDRLLNAVEQFVGPD---IAGHPVWNLRTKTPSNEQVTVPWHQDNAYLQPPSLGTL---------------------------------QPTAWIPLLNATRENGCMQIVRGGHKKGITAPHVCCAGGTWYVELAEDDMEKTLGCDMKKDVV--TCEVPYGGVLFLNNCVPHRSLENNSNDIRWSLDLRWQDPAKPSGFWGDKKPVLMR-------TEEDPGYKPVWEGFADVSK---HTQYDDKMKDTDQEAND----------------------------DEFDPTIQGPWMLRWKIVHHNRHTKGL 366
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|1126224604|ref|XP_019646668.1| (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri]) HSP 1 Score: 310.457 bits (794), Expect = 1.105e-98 Identity = 168/417 (40.29%), Postives = 222/417 (53.24%), Query Frame = 0 Query: 31 PPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDR-GEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGFGG 446 PPP T G L+++++ FF+EGY++ +D F P ELQPV D ++ VD LA ++ +AGRI D G ++R+ + + PGA+V+LHK LP +FR LWS+ RLL++ +Q +G +AGHP+WNLR K P+ VPWHQD AYL ++ TL Q TAWIPLLDAN NGC+QV+R H+ G T +H CCVGGTWYVE+ D+ + LG D +++ TCEVP G VLFL+N IPHRSL N + IRWS+DLRWQ +P GF GIKD++ MR DW+ F +VDR G Q Q + A A D I GPWMLRW++V+HN HT G Sbjct: 28 PPPQPTE--KKPGQLSQEQVRQFFEEGYVLVKDYFKPEELQPVRDAVEGLVDDLAQRMYKAGRIKDTHKDAGLFQRLTLLNQEYPGAAVVLHKKGKLPQAFRDLWSNERLLNVMEQFIGPE---IAGHPIWNLRTKTPRNEEVTVPWHQDNAYLGVQSLGTL---------------------------------QPTAWIPLLDANTDNGCMQVVRGGHRKGITGKHVCCVGGTWYVELPEDEIQNTLGCDLKNDIV--TCEVPYGGVLFLNNAIPHRSLENNTDQIRWSLDLRWQHPDKPCGFEGIKDVIPMR-----SAKYPDLKPDWEKFESVDRTGNQQRQ----------------------------------MNNKAGAEDEFDTTIQGPWMLRWEIVNHNKHTRSILG 365
BLAST of EWM24347.1 vs. NCBI_GenBank
Match: gi|780103995|ref|XP_003726259.2| (PREDICTED: phytanoyl-CoA dioxygenase, partial [Strongylocentrotus purpuratus]) HSP 1 Score: 308.916 bits (790), Expect = 3.847e-98 Identity = 175/428 (40.89%), Postives = 235/428 (54.91%), Query Frame = 0 Query: 21 TRSAATMNVDPPPWLTRP----YSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLMREGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGEGGQDGGKVEGREIEGEGESGKDMVLAAAAAASDALTPVISGPWMLRWDLVHHNAHTAGF 444 +R + + +P +LT P G L +L +F+EG L+ D F P EL PV + + S VD + +KL AG+I D ++ ++RM +E + PGA+VLLHK LP SF+ LWSD RLL++ +QL+G P++ AGHPVWNLRVK PQ +VVPWHQD AYLDP A L QVTAWIPLLD A NGC+QV R+ H+ G TA+H CCVGGTWYVE++++D LG+D + TC++ G VLF++N +PHRSL N+S +IRWS+DLRWQ +P GF+GIKD VLMR G Y +WD F + D +A + K VE + + + ++ I+GPWM RW+LV HN HT F Sbjct: 1 SRCRVSRDSNPDIYLTVPPQKGERKPGQLTDAQLKQYFEEGCLLVPDFFKPEELDPVREGVKSSVDDIVNKLYDAGKIKDKYENVDLFQRMTCVEKEFPGAAVLLHKTGSLPRSFKDLWSDARLLNVMEQLIG-PNI--AGHPVWNLRVKTPQNEEAVVPWHQDNAYLDPSALNVL---------------------------------QVTAWIPLLDVTAKNGCMQVARKGHRKGVTAKHRCCVGGTWYVEVEVEDMVETLGVDMDKDLV--TCDMSYGGVLFMNNCVPHRSLTNLSNNIRWSLDLRWQRPDKPNGFYGIKDSVLMRTEGD-----PNYKPNWDEFESTDHHSVAKEAFSEVKDPN--------VEIKSDDVDFDT------------------TITGPWMQRWELVFHNRHTQNF 359 The following BLAST results are available for this feature:
BLAST of EWM24347.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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