EWM24353.1, cds6321 (CDS) Nannochloropsis gaditana

Overview
NameEWM24353.1
Unique Namecds6321
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:279749..279822 +
Alignment locationCM002468.1:279872..280094 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24353.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100163g2.7191.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:279749..279822 +
CM002468.1supercontigCM002468.1:279872..280094 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24353.1 vs. NCBI_GenBank
Match: gi|585105749|gb|EWM24353.1| (hypothetical protein Naga_100163g2 [Nannochloropsis gaditana])

HSP 1 Score: 207.608 bits (527), Expect = 5.378e-68
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 
Query:    1 MIFSLSQLFLAKFYFPHVCRDTSINADQVLIKMVQSWVQNPFMSRYGRYVQDHKKFCTSVQSQERTLIVEHCTKHGTSFQGGGWQQSNSSYPTITQVN 98
            MIFSLSQLFLAKFYFPHVCRDTSINADQVLIKMVQSWVQNPFMSRYGRYVQDHKKFCTSVQSQERTLIVEHCTKHGTSFQGGGWQQSNSSYPTITQVN
Sbjct:    1 MIFSLSQLFLAKFYFPHVCRDTSINADQVLIKMVQSWVQNPFMSRYGRYVQDHKKFCTSVQSQERTLIVEHCTKHGTSFQGGGWQQSNSSYPTITQVN 98
The following BLAST results are available for this feature:
BLAST of EWM24353.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105749|gb|EWM24353.1|5.378e-68100.00hypothetical protein Naga_100163g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6336rna6336Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications