EWM24370.1, cds6301 (CDS) Nannochloropsis gaditana

Overview
NameEWM24370.1
Unique Namecds6301
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:233897..234148 +
Alignment locationCM002468.1:234293..235192 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24370.1
Productnad-dependent epimerase dehydratase
Orig transcript idgnl|cribi|Naga_100246g10.10065.mrna
Gene38
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:233897..234148 +
CM002468.1supercontigCM002468.1:234293..235192 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR001509Epimerase_deHydtase_N
Homology
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|585105767|gb|EWM24370.1| (nad-dependent epimerase dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query:    1 MRAHIHALALLALMAGALGFQVRELFVIFMPLALVPMWPFDPLLYLPPPQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 383
            MRAHIHALALLALMAGALGFQVRELFVIFMPLALVPMWPFDPLLYLPPPQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK
Sbjct:    1 MRAHIHALALLALMAGALGFQVRELFVIFMPLALVPMWPFDPLLYLPPPQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 383          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|553191754|ref|XP_005855445.1| (nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526] >gi|422293604|gb|EKU20904.1| nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0
Identity = 354/383 (92.43%), Postives = 354/383 (92.43%), Query Frame = 0
Query:    1 MRAHIHALALLALMAGALGFQVRELFVIFMPLALVPMWPFDPLLYLPPPQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 383
            MRAHIHALALLALMAGALGFQ                             IPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK
Sbjct:    1 MRAHIHALALLALMAGALGFQ-----------------------------IPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 354          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|299115197|emb|CBN74028.1| (38 kDa ribosome-associated protein precursor [Ectocarpus siliculosus])

HSP 1 Score: 430.639 bits (1106), Expect = 4.445e-147
Identity = 198/335 (59.10%), Postives = 250/335 (74.63%), Query Frame = 0
Query:   49 PQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTH----EPDFECDEVVL 379
            P   + M A    ++VL+IGGTRFSGLYL KELH RG+++ L+NRG+TAN+ +P ES   YA+R+     + GDR +P+   +     +FD ++DMN RE +DT+ +AD + G+VDH+V+MSSAGVYLKS+LMPH+E D  DPKSRHKGKFE+E YL E G+P+TSIRPTYIYGP NYNPLE+YFF R+   R V VPGHGQHLTGLGHVKDLA AMA V+G+E AKGQVYNVQ  +AI+FDG VR  A+A GKDP +V+I H++P  +DFGKKKAFPMRP HFFTS EKAM DLDW P +   +G +DS++ D+  +        DFECD+ VL
Sbjct:   38 PSSSLRMAAAEGKQRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGQTANKQLPCESDAEYAKRVEDVKTIVGDRKDPEVCQSTLGGEKFDAVFDMNAREVSDTKAVADVFKGKVDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVKDLARAMANVLGKESAKGQVYNVQDNRAISFDGMVRACAEAMGKDPAAVKIKHFEPTNFDFGKKKAFPMRPGHFFTSCEKAMTDLDWAPEFNTVDGLRDSYENDFVHKKAAGGLNNDFECDDKVL 372          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|873223801|emb|CEM27831.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 415.616 bits (1067), Expect = 3.951e-141
Identity = 197/325 (60.62%), Postives = 239/325 (73.54%), Query Frame = 0
Query:   63 KVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHE----PDFECDEVVLAGKK 383
            KVL+IGG+RFSGLYL++EL DRG+D+T+FNRGKTA RP+PGESA  +  R     FV GDR N  DL  +A + +FD I+DMNGRE  +T+ L D +  R+ H+VYMSSAGVYLKSD MPH+E D VDPK RHKGK ++E YL     P+TSIRPTYIYGP NYNP+EEYFF R+   R V +PGHGQHLTGLGHV+DLA   A V+GR  A G+ YN    +A+TFDG  RL A A GKDP  VE+VHY+PK+ DFGKKKAFP RPQHFFTS+E A+RDLDW P Y N EG +DS+  D+ ++  E     DFE D++VLA  K
Sbjct:   57 KVLLIGGSRFSGLYLWRELLDRGHDVTVFNRGKTALRPIPGESASEFERRKSSTKFVTGDRKNLADLRQVA-SMQFDAIFDMNGREVDETKMLVDLFPNRLKHYVYMSSAGVYLKSDEMPHREGDAVDPKCRHKGKLDSEEYLRSINAPWTSIRPTYIYGPLNYNPVEEYFFERLAQNRPVCIPGHGQHLTGLGHVRDLARQFANVLGRPHAVGKTYNAGGLEAVTFDGVARLCAAAMGKDPSRVELVHYNPKDLDFGKKKAFPFRPQHFFTSIENAIRDLDWLPDYDNLEGLRDSYQNDFVIKQREGKLKNDFETDDIVLAAAK 380          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|922865193|gb|KOO32302.1| (NAD-dependent epimerase dehydratase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 407.912 bits (1047), Expect = 1.868e-138
Identity = 186/325 (57.23%), Postives = 241/325 (74.15%), Query Frame = 0
Query:   62 KKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTH----EPDFECDEVVLAGK 382
            K VLI+GGTRFSGLYL++ELH+RG+ +TL+NRGKTA + +P ES E++ +R     +VKGDR +  D+ A     +FDV+YDM GRE  DT+PL + +  +V+HF+YMSSAGVY KS  MPH E DP DPKSRHKGK ETE  L  KG+PFTSIRPTYIYGP NYNPLEE+FF R+ AG+ + +PGHGQHLTGLGHVKDLA AMA VIG++ A G++YNVQ  Q++TF+G  +L A A GKD E V I  Y+ K +DFG+KKAFPMR QHFF  +++AM+DL+W P Y   +G +D+++ D+  +        DF CD+++LA K
Sbjct:   40 KDVLIVGGTRFSGLYLWEELHNRGHSVTLYNRGKTALKKIPSESDEAFEKRKAATKYVKGDRKDIADMKAKLGGLKFDVVYDMGGREAGDTEPLIELFGNKVEHFIYMSSAGVYKKSLTMPHFEVDPTDPKSRHKGKLETEDLLKAKGVPFTSIRPTYIYGPLNYNPLEEWFFTRLDAGKDICIPGHGQHLTGLGHVKDLAVAMANVIGKKAAIGKIYNVQDAQSVTFEGLAKLCANAMGKDAEEVRIKTYNKKNFDFGEKKAFPMREQHFFCGIDQAMKDLEWKPQYNMAQGLKDAYENDFVAKKAAGKLNLDFSCDDMILAAK 364          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|648456724|ref|WP_026148475.1| (3-beta hydroxysteroid dehydrogenase [Leptolyngbya boryana] >gi|932878387|dbj|BAS58439.1| NAD-dependent epimerase/dehydratase [Leptolyngbya boryana IAM M-101] >gi|932885027|dbj|BAS64787.1| NAD-dependent epimerase/dehydratase [Leptolyngbya boryana dg5] >gi|1210136245|dbj|BAY55350.1| NAD-dependent epimerase/dehydratase [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 380.178 bits (975), Expect = 2.534e-128
Identity = 190/322 (59.01%), Postives = 231/322 (71.74%), Query Frame = 0
Query:   63 KVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRT----HEPDFECDEVVLA 380
            ++LI+GGTRF G+YL + L  +G+D+TLFNRG   N+P P E  +           V GDRTN DDL  LA   +FD ++D NGRE +DTQPLA+ + GR+ HFVYMSSAGVYLKSD MPH E D VDPKSRHKGK +TE+YLA+ G+PFTSIRPTYIYGPQNYN LE +FF R+V  R V +PGHGQH T  GHVKDLA AMA+V+G + A GQ+YNV   + +TFDG  R  A A GKDP S++IVHYDPK +DFGKKKAFPMR QHFF  V KA+ +L+WTP +    G +DSF  DY L+T     E DF  D+ +LA
Sbjct:    2 RILIMGGTRFIGVYLTQLLVQQGHDVTLFNRG---NKPAPVEGVKQ----------VTGDRTNADDLKQLASL-DFDAVFDNNGRELSDTQPLAELFKGRIQHFVYMSSAGVYLKSDQMPHVEGDAVDPKSRHKGKHDTESYLADAGIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPVPIPGHGQHFTQFGHVKDLAAAMAKVLGNQTAIGQIYNVSGTREVTFDGLARACATAVGKDPGSLKIVHYDPKSFDFGKKKAFPMRTQHFFADVHKAITELNWTPEFDLISGLKDSFQNDY-LKTGRDRKEIDFSLDDQILA 308          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|551649953|ref|XP_005827760.1| (hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712] >gi|428171867|gb|EKX40780.1| hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712])

HSP 1 Score: 377.096 bits (967), Expect = 1.109e-126
Identity = 189/336 (56.25%), Postives = 236/336 (70.24%), Query Frame = 0
Query:   60 AGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYN---GRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPF--TSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGRE-QAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGK-KKAFPMRPQHFFTSVEKAMRDLDWTPAYGNT-EGWQDSFDQDYALRTH----EPDFECDEVVLAGKK 383
            + + VLIIGGTRFSG YL+KEL DRG+ +TL+NRGKT+ +P+PGES   Y  R+    ++ GDR +P+ +  L     +  +YDMNGRE +DT PLAD +      +  F+YMSSAGVY KS  MPH E D VDPKSRHKGK ETE YL   G  F   SIRPTYI GPQNYN +E+YF  R  A R   VPGHG+HLTG GHVKDLA AMA VIGRE +  GQVYN+Q+  AITFDGA R+AA+  G +P+ VEIVHY+PKE+ F + KKAFPMRPQHFFT+V+KA RDL+W P + +  E +QDS+  D+ L+      + DF CDE+V + +K
Sbjct:    2 SKESVLIIGGTRFSGAYLWKELVDRGHQVTLYNRGKTSPKPLPGESESDYKRRLETTKYLMGDRKDPEQIKNLVDPSLYTYVYDMNGREASDTAPLADLFTTSRSELKSFIYMSSAGVYKKSSEMPHMEHDAVDPKSRHKGKLETEAYLRSLGGNFNWCSIRPTYICGPQNYNVVEQYFLERADAKRGFIVPGHGEHLTGFGHVKDLAVAMANVIGREKKTNGQVYNIQNTNAITFDGACRVAAEVVGTNPDDVEIVHYNPKEFKFPEGKKAFPMRPQHFFTNVDKARRDLEWEPMFNSCREIFQDSYTNDFLLKKAAGKLDNDFTCDEIVFSQRK 337          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|652323488|ref|WP_026720806.1| (3-beta hydroxysteroid dehydrogenase [Fischerella sp. PCC 9431])

HSP 1 Score: 375.555 bits (963), Expect = 2.006e-126
Identity = 186/323 (57.59%), Postives = 225/323 (69.66%), Query Frame = 0
Query:   63 KVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTH---EPDFECDEVVLAGK 382
            ++LI+GGTRF G+YL + L  +G+++ LFNRG   NRPVP        E +GQ T   GDRTN   L        FD I+D NGRE TDTQPLA+ + GRV +F+YMSSAGVYLKSD MPH E D VDPKSRHKGK ETE YL ++G+PFTSIRPTYIYGPQNYN LE +FF R+V  R + +PG+G H+T LGHVKDLATAM +V+G  QA  Q+YN+   + +TFDG  R  A AAGK P+ ++IVHYDPK +DFGK+KAFPMR QHFF SV KAM  LDW P Y    G +DSF+ DY +      E DF  DE +L  K
Sbjct:    2 RILIMGGTRFIGVYLTQLLVQQGHEVVLFNRG---NRPVP-------VEGVGQIT---GDRTNSIQLKEKLSQENFDAIFDNNGRELTDTQPLAEIFQGRVQNFIYMSSAGVYLKSDQMPHIEGDAVDPKSRHKGKHETEAYLTQQGIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGLHITQLGHVKDLATAMTKVLGNSQAVKQIYNISGDRFVTFDGLARACAVAAGKSPDDIKIVHYDPKNFDFGKRKAFPMRTQHFFASVNKAMTQLDWKPEYDLISGLKDSFENDYLVSGRDKAEIDFSVDEEILQNK 311          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|497242777|ref|WP_009556999.1| (nucleoside-diphosphate sugar epimerase [Oscillatoriales cyanobacterium JSC-12] >gi|410710725|gb|EKQ68232.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 375.17 bits (962), Expect = 2.354e-126
Identity = 187/321 (58.26%), Postives = 231/321 (71.96%), Query Frame = 0
Query:   63 KVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTH---EPDFECDEVVLA 380
            ++LI+GGTRF G+YL + L+++ +++ LFNRG   N+P P        E I Q   + GDRTNP DL A  +  EFD I+D NGRE +DTQPLA+ +  +V HFVYMSSAGVYLKSD MPH E DPVDP+SRHKGK +TETYLAE+GLPFTSIRPTYIYGPQNYN LE +FF R+V  R + +PG+G  +T  GHVKDLA AM QV+G  +A GQVYNV   + +TFDG  R  A AAGK P+S++IVHYDPK++DFGK+KAFPMR QHFF SV+KAM DL W P Y    G +DSF+ DY        E DF  D+ +L+
Sbjct:    2 RILIMGGTRFIGVYLTRLLYEKEHEVVLFNRG---NKPTP-------VEGIAQ---IHGDRTNPADLKAKLEGQEFDAIFDNNGRELSDTQPLAELFKDQVKHFVYMSSAGVYLKSDQMPHIEGDPVDPESRHKGKHDTETYLAEQGLPFTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGMTITQFGHVKDLAQAMVQVLGNRRAVGQVYNVSGDRFVTFDGLARACAVAAGKSPDSLKIVHYDPKQFDFGKRKAFPMRVQHFFASVQKAMNDLYWKPEYDLIAGLKDSFENDYLASERYKAEVDFSLDDQILS 309          
BLAST of EWM24370.1 vs. NCBI_GenBank
Match: gi|504953929|ref|WP_015141031.1| (nucleoside-diphosphate sugar epimerase [Nostoc sp. PCC 7524] >gi|427367900|gb|AFY50621.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524])

HSP 1 Score: 372.859 bits (956), Expect = 2.077e-125
Identity = 182/320 (56.88%), Postives = 231/320 (72.19%), Query Frame = 0
Query:   63 KVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTH---EPDFECDEVVL 379
            ++LI+GGTRF G+YL + L ++G+++ LFNRG   NRP+P        + +GQ   + GDRT+P  L        FDVI+D NGRE +DTQPLA+ + GRV HF+YMSSAGVYLKSD +PH E D VDPKSRHKGK ETE YL ++GLPFTSIRPTYIYGP NYN LE +FF R+V  R + +PG+G H+T LGHV+DLATAM+QVIG +QA GQ+YN+   + +TFDG  R  A+AAGK P++++IVHYDPK++DFGK+KAFPMR QHFF SV+KA   L+W P Y    G  DSF++DY        E DF  DE +L
Sbjct:    2 RILIMGGTRFIGVYLTQILVEQGHEVVLFNRG---NRPLPN------LQGVGQ---IIGDRTDPTQLKEKLLQENFDVIFDNNGRELSDTQPLAEIFQGRVQHFIYMSSAGVYLKSDQLPHVEGDTVDPKSRHKGKHETEAYLQQQGLPFTSIRPTYIYGPMNYNDLESWFFDRIVRDRPIPIPGNGLHITQLGHVQDLATAMSQVIGNKQAIGQIYNISGDRFVTFDGLARACAQAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVDKAQTQLNWQPQYDLISGLADSFEKDYLATGRDKTEIDFSVDEEIL 309          
The following BLAST results are available for this feature:
BLAST of EWM24370.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105767|gb|EWM24370.1|0.000e+0100.00nad-dependent epimerase dehydratase [Nannochlorops... [more]
gi|553191754|ref|XP_005855445.1|0.000e+092.43nad-dependent epimerase dehydratase [Nannochlorops... [more]
gi|299115197|emb|CBN74028.1|4.445e-14759.1038 kDa ribosome-associated protein precursor [Ecto... [more]
gi|873223801|emb|CEM27831.1|3.951e-14160.62unnamed protein product [Vitrella brassicaformis C... [more]
gi|922865193|gb|KOO32302.1|1.868e-13857.23NAD-dependent epimerase dehydratase [Chrysochromul... [more]
gi|648456724|ref|WP_026148475.1|2.534e-12859.013-beta hydroxysteroid dehydrogenase [Leptolyngbya ... [more]
gi|551649953|ref|XP_005827760.1|1.109e-12656.25hypothetical protein GUITHDRAFT_96197 [Guillardia ... [more]
gi|652323488|ref|WP_026720806.1|2.006e-12657.593-beta hydroxysteroid dehydrogenase [Fischerella s... [more]
gi|497242777|ref|WP_009556999.1|2.354e-12658.26nucleoside-diphosphate sugar epimerase [Oscillator... [more]
gi|504953929|ref|WP_015141031.1|2.077e-12556.88nucleoside-diphosphate sugar epimerase [Nostoc sp.... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6316rna6316Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications