EWM24365.1, cds6299 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24365.1 vs. NCBI_GenBank
Match: gi|585105762|gb|EWM24365.1| (hypothetical protein Naga_100246g11 [Nannochloropsis gaditana]) HSP 1 Score: 1073.54 bits (2775), Expect = 0.000e+0 Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 0 Query: 1 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQSKYGPQMQLFPTVMRHIISICEEGEGRDGAKGGCSNSWSKNHKNGGGATLIRNTLRKVILSISE 530 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQSKYGPQMQLFPTVMRHIISICEEGEGRDGAKGGCSNSWSKNHKNGGGATLIRNTLRKVILSISE Sbjct: 1 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQSKYGPQMQLFPTVMRHIISICEEGEGRDGAKGGCSNSWSKNHKNGGGATLIRNTLRKVILSISE 530
BLAST of EWM24365.1 vs. NCBI_GenBank
Match: gi|585105763|gb|EWM24366.1| (hypothetical protein Naga_100246g11 [Nannochloropsis gaditana]) HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0 Identity = 448/449 (99.78%), Postives = 448/449 (99.78%), Query Frame = 0 Query: 1 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGG 449 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALE G Sbjct: 1 MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEVG 449
BLAST of EWM24365.1 vs. NCBI_GenBank
Match: gi|553191778|ref|XP_005855453.1| (hypothetical protein NGA_0097300, partial [Nannochloropsis gaditana CCMP526] >gi|422293612|gb|EKU20912.1| hypothetical protein NGA_0097300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 841.262 bits (2172), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0 Query: 48 MHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQ 466 MHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQ Sbjct: 1 MHQAFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSLLLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADPRRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWIPCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGLVRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQ 419
BLAST of EWM24365.1 vs. NCBI_GenBank
Match: gi|298708334|emb|CBJ48397.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.8929 bits (224), Expect = 5.034e-17 Identity = 71/239 (29.71%), Postives = 109/239 (45.61%), Query Frame = 0 Query: 254 FCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLC--QPAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGWDLSLNLGDERGNGAQERKSPEVVEGEESRG--LEGNEKEGRSEKRRGGGGLEHGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGGDLMHSFKLAALINALQSKYGPQMQLFPTVMRHIISICE 488 F R ++PR L ASR L+ A++ + RP +V+ +++PLLC PA ++GS QCE R+IKQ + ++ LE +L GLCG P E ++ G +EG G H A C WT++T+PV+T L +P LSD + ++ + AA E L S K LI++L ++YGPQ++ V+R + C Sbjct: 20 FVRAVLVPRARALNAPASRLLVTAVSGIGKARPGVVIDGLVLPLLCGGDPASAVGSAQCELCTRLIKQI---LPKD-----------TLEAVLVGLCG--------------------PAEDESAQTAGGWIEGPSGGSGGNGTNAAAGRRHDAAGSSSRCVWTELTVPVMTTALNLKPALSDRAIAALVRGVEAAAERAA-LQKSLKFTTLIHSLVTRYGPQLKPHVPVLRTAVGRCS 223 The following BLAST results are available for this feature:
BLAST of EWM24365.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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