EWM24379.1, cds6296 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|585105777|gb|EWM24379.1| (oxygen-evolving enhancer protein [Nannochloropsis gaditana]) HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 Query: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ 334 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ Sbjct: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ 334
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|553181556|ref|XP_005853586.1| (photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|553191757|ref|XP_005855446.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|422293605|gb|EKU20905.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|422295472|gb|EKU22771.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0 Query: 26 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ 334 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ Sbjct: 1 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ 309
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|585105778|gb|EWM24380.1| (oxygen-evolving enhancer protein [Nannochloropsis gaditana]) HSP 1 Score: 476.093 bits (1224), Expect = 3.593e-168 Identity = 234/237 (98.73%), Postives = 235/237 (99.16%), Query Frame = 0 Query: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV-PSYR 236 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV S+R Sbjct: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFR 237
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|318610518|dbj|BAJ61702.1| (oxygen-evolving enhancer protein [Vaucheria frigida]) HSP 1 Score: 373.629 bits (958), Expect = 2.244e-126 Identity = 188/288 (65.28%), Postives = 221/288 (76.74%), Query Frame = 0 Query: 45 MNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 +N+ + D KN AL V G S F AP+ ++A+TK+ + SLSY+QVKGTGLANRCPEV+G SI + G +L DLC+EPK +QV EE K+GET K +VNTKLMTRQTY+L G+ G + EG K+ F EKDGIDYAATTVQLPGGERVPFLFTVKELVA AA GN++ PGFQFGG F PSYR+GLFLDPKGRG TGYDMAVALPGLQ+ EGD+E+FKENNK FDVT G IE EVN+V+ GE+GGVFVS Q DTDMGSK PK +L+KGIFYGR+ Sbjct: 36 VNMSMTAQDDFKNVAVGALAVFAGLSFFGAPA-ADAITKDQIDSLSYMQVKGTGLANRCPEVIGTESINVNG--KMKLMDLCIEPKVFQVLEETATKKGETKKEYVNTKLMTRQTYTLYGIEGSFAPEEG-KLTFREKDGIDYAATTVQLPGGERVPFLFTVKELVAKAATSGNSVAPGFQFGGGFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKEMFKENNKTFDVTKGQIEFEVNRVDASAGEIGGVFVSNQKGDTDMGSKTPKDVLVKGIFYGRL 319
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|98962678|gb|ABF59672.1| (photosystem II extrinsic protein O [Vaucheria litorea] >gi|193870778|gb|ACF22979.1| chloroplast photosystem II extrinsic protein O [Vaucheria litorea] >gi|193870780|gb|ACF22980.1| photosystem II extrinsic protein O [Elysia chlorotica]) HSP 1 Score: 371.318 bits (952), Expect = 1.687e-125 Identity = 191/288 (66.32%), Postives = 220/288 (76.39%), Query Frame = 0 Query: 45 MNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 M+VQ D +K AL +L G S AP A+TK+ + SLSYLQVKGTGLANRCPEV G GSI + G KT ++ D+C+EPKT+QV EE ++KRGE K +VNTKLMTRQTY+L G+ G + E GKI F EKDGIDYAATT+QLPGGERVPFLFTVKELVA A PGN++ PG QFGG F PSYR+GLFLDPKGRG TGYDMAVALPG Q+ +EGD ELF ENNK FDVT GNIE EVN+V+ GE+GGVFVS Q DTDMGSK PK LL+KGIFYGR+ Sbjct: 39 MSVQ----DDIKTLAVGALTILAGVSILNAPV--EAITKDQIESLSYLQVKGTGLANRCPEVFGTGSIDVNG-KT-KIVDMCIEPKTFQVLEETSSKRGEAKKEYVNTKLMTRQTYTLYGIDGSFAP-ENGKITFREKDGIDYAATTIQLPGGERVPFLFTVKELVAQATTPGNSVTPGLQFGGPFSTPSYRTGLFLDPKGRGGSTGYDMAVALPGKQSGIEGDAELFGENNKTFDVTKGNIEFEVNRVDPSNGEIGGVFVSKQKGDTDMGSKVPKDLLIKGIFYGRL 317
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|318610510|dbj|BAJ61701.1| (oxygen-evolving enhancer protein [Botrydium granulatum]) HSP 1 Score: 369.392 bits (947), Expect = 9.154e-125 Identity = 183/264 (69.32%), Postives = 220/264 (83.33%), Query Frame = 0 Query: 69 GSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 G +FLA + + A+TK+ + SLSY+QVKGTGLANRCPEVVGEG+I + GKT ++ DLC+EPK +QV EE ++++GE K +VNTKLMTRQTY+L G+ GD++ E GK+ F EKDGIDYAATTVQLPGGERVPFLFTVKELVA AA+ G+++ PGFQFGG+FK PSYR+GLFLDPKGRG TGYDMAVALPGLQ+ EGD+ELF ENNK FDVT G IE EVN+V+ E GE+GGVFVS Q DTDMGSK PK +L+KGIFYGR+ Sbjct: 59 GLSFLA-APAEAITKDQIDSLSYMQVKGTGLANRCPEVVGEGTINV-AGKT-KIVDLCIEPKVFQVLEESSSRKGEVKKEYVNTKLMTRQTYTLYGIEGDLT-SEDGKLVFTEKDGIDYAATTVQLPGGERVPFLFTVKELVAKAAKGGSSVAPGFQFGGAFKTPSYRTGLFLDPKGRGGSTGYDMAVALPGLQSGEEGDKELFDENNKTFDVTDGQIEFEVNRVDAEAGEIGGVFVSKQKGDTDMGSKVPKDMLVKGIFYGRL 318
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|32130541|gb|AAN11311.1| (oxygen-evolving enhancer 1 [Heterosigma akashiwo]) HSP 1 Score: 367.466 bits (942), Expect = 2.918e-124 Identity = 182/258 (70.54%), Postives = 208/258 (80.62%), Query Frame = 0 Query: 75 PSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 P + A+TK + +SL YLQVKGTGLANRC EV+G SI + G K QL DLC+EPKT+QVEEE K G K+FVNTKLMTRQTY+LDG+SG IS + GKI F E+DGIDYAA+TVQ PGGERVPFLFTVKELVATA+ G+ + PGFQ GG F VPSYR+GLFLDPKGRG TGYDMAVALPG Q+ VEGD ELFKENNK+FDV G IE EVN+VN EEGE+GGVFVSTQ SDTDMG K P+ +L+KGIFYGR+ Sbjct: 46 PMSAFAITKAESNSLDYLQVKGTGLANRCSEVIGTDSITISGKK--QLVDLCIEPKTFQVEEEKVAKSGSIQKAFVNTKLMTRQTYTLDGISGTIS-SKDGKIVFTEEDGIDYAASTVQKPGGERVPFLFTVKELVATASTSGDKIAPGFQMGGKFTVPSYRTGLFLDPKGRGMSTGYDMAVALPGKQSGVEGDAELFKENNKVFDVLGGQIEFEVNRVNAEEGEIGGVFVSTQASDTDMGGKEPQTILLKGIFYGRI 300
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|28565363|gb|AAO43192.1| (oxygen-evolving enhancer protein 1 precursor, partial [Phaeodactylum tricornutum]) HSP 1 Score: 365.155 bits (936), Expect = 3.060e-123 Identity = 179/255 (70.20%), Postives = 208/255 (81.57%), Query Frame = 0 Query: 78 SNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 +NALTK ++ LSYLQVKGTGLANRCPEVVGE SI +GG+ +L D+C+EPK W VEEE+ K G T K FVN+K+MTRQTY+LDG+ G + EGG I F+E++GIDYAATTVQLPGGERVPFLFTVK+LVA G + KPGFQ GG F PSYR+GLFLDPKGRG TGYDMAVALPGLQ+ EGD++LFKENNK FD+T+G IE+EVNKVN EE E+GGVFV+TQ SDTDMGSK PKK+L KGIFY RV Sbjct: 59 ANALTKSQINELSYLQVKGTGLANRCPEVVGEDSITPKGGQ--RLVDMCIEPKAWAVEEEI-GKAGRTEKKFVNSKVMTRQTYTLDGIEGALK-SEGGSIVFQEQEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFNTPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDDLFKENNKTFDITTGRIEMEVNKVNAEEQEIGGVFVATQLSDTDMGSKVPKKVLTKGIFYARV 307
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|219119085|ref|XP_002180309.1| (oxygen-evolving enhancer protein 1 precursor [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408566|gb|EEC48500.1| oxygen-evolving enhancer protein 1 precursor [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 363.999 bits (933), Expect = 1.063e-122 Identity = 179/255 (70.20%), Postives = 208/255 (81.57%), Query Frame = 0 Query: 78 SNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 +NALTK ++ LSYLQVKGTGLANRCPEVVGE SI +GG+ +L D+C+EPK W VEEE+ K G T K FVN+K+MTRQTY+LDG+ G + EGG I F+E++GIDYAATTVQLPGGERVPFLFTVK+LVA G + KPGFQ GG F PSYR+GLFLDPKGRG TGYDMAVALPGLQ+ EGD++LFKENNK FD+T+G IE+EVNKVN EE E+GGVFV+TQ SDTDMGSK PKK+L KGIFY RV Sbjct: 59 ANALTKSQINELSYLQVKGTGLANRCPEVVGEDSITPKGGQ--RLVDMCIEPKAWAVEEEI-GKAGRTEKKFVNSKVMTRQTYTLDGIEGALK-SEGGSIVFQEQEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFNTPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDDLFKENNKTFDITTGRIEMEVNKVNAEEQEIGGVFVATQLSDTDMGSKVPKKVLTKGIFYARV 307
BLAST of EWM24379.1 vs. NCBI_GenBank
Match: gi|318610532|dbj|BAJ61704.1| (oxygen-evolving enhancer protein [Kryptoperidinium foliaceum]) HSP 1 Score: 362.844 bits (930), Expect = 2.460e-122 Identity = 185/287 (64.46%), Postives = 226/287 (78.75%), Query Frame = 0 Query: 48 QPSFLDQLKNGVSKALPVLVGGSAFLA--PSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEVGGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRV 332 Q + L LK+ ++ A V + G+A L+ + ALTK +++ L+YLQVKGTGLANRCPEVVGE +I+ + G+ +L D+C+EPK W VEEE+ K G+T K FVN+K++TRQTY+LDG+ G +S EGG I F+EK+GIDYAATTVQLPGGERVPFLFTVK+LVA G + KPGFQ GG F VPSYR+GLFLDPKGRG TGYDMAVALPGLQ+ EGD++LFKENNK FDVT+G IE+EVNKVN +E E+GGVFV+TQ DTDMGSK PKK+L KGIFY RV Sbjct: 26 QNTALFSLKDDLANAGKVALAGAAALSIMAQPAQALTKSEINELTYLQVKGTGLANRCPEVVGEDTISPKNGQ--KLVDMCIEPKAWAVEEEI-GKAGKTEKKFVNSKVVTRQTYTLDGIEGVLS-SEGGNIVFKEKEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFSVPSYRTGLFLDPKGRGGTTGYDMAVALPGLQSGEEGDDDLFKENNKTFDVTTGRIEMEVNKVNADEQEIGGVFVATQLGDTDMGSKVPKKILTKGIFYARV 306 The following BLAST results are available for this feature:
BLAST of EWM24379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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