EWM24380.1, cds6295 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|585105778|gb|EWM24380.1| (oxygen-evolving enhancer protein [Nannochloropsis gaditana]) HSP 1 Score: 489.189 bits (1258), Expect = 5.160e-175 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0 Query: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC 238 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC Sbjct: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC 238
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|585105777|gb|EWM24379.1| (oxygen-evolving enhancer protein [Nannochloropsis gaditana]) HSP 1 Score: 476.093 bits (1224), Expect = 2.560e-168 Identity = 234/237 (98.73%), Postives = 235/237 (99.16%), Query Frame = 0 Query: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFR 237 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV S+R Sbjct: 1 MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV-PSYR 236
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|553181556|ref|XP_005853586.1| (photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|553191757|ref|XP_005855446.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|422293605|gb|EKU20905.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526] >gi|422295472|gb|EKU22771.1| photosystem II oxygen-evolving enhancer protein 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 419.083 bits (1076), Expect = 3.952e-146 Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0 Query: 26 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFR 237 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV S+R Sbjct: 1 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV-PSYR 211
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|676381211|ref|XP_009033884.1| (hypothetical protein AURANDRAFT_69678 [Aureococcus anophagefferens] >gi|323455658|gb|EGB11526.1| hypothetical protein AURANDRAFT_69678 [Aureococcus anophagefferens]) HSP 1 Score: 219.164 bits (557), Expect = 1.778e-67 Identity = 122/215 (56.74%), Postives = 151/215 (70.23%), Query Frame = 0 Query: 26 MKTAVLLASVGCAQAFVPQMNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSI--SNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC 238 MK A++ + A A P +P+ +L V A +L G +F P++ +NA+T E + LSY QVKGTGLANRC EVVG+ SI++ G Y L D+CLEPKTWQVEE+V NK+G+ +K FVNTKLMTRQTY+LDG+SG +S G G I F E+DGIDYA TTVQLPGGERVPFLFTVKELVA G A KPG++FGG+FKV S+R Sbjct: 1 MKAAIISTLLFGADALQP---TKPAVAQKLATDV--AAGILAAGVSFAGPAVLSANAITSEVRNQLSYEQVKGTGLANRCNEVVGKDSISVPG-SGYSLVDVCLEPKTWQVEEQVANKKGDVSKQFVNTKLMTRQTYTLDGISGKLSGGSG--ITFTEEDGIDYAPTTVQLPGGERVPFLFTVKELVAKGN--GGAFKPGYEFGGTFKV-PSYRT 204
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|318610518|dbj|BAJ61702.1| (oxygen-evolving enhancer protein [Vaucheria frigida]) HSP 1 Score: 218.394 bits (555), Expect = 6.582e-67 Identity = 114/186 (61.29%), Postives = 137/186 (73.66%), Query Frame = 0 Query: 45 MNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSF 230 +N+ + D KN AL V G S F AP+ ++A+TK+ + SLSY+QVKGTGLANRCPEV+G SI + G +L DLC+EPK +QV EE K+GET K +VNTKLMTRQTY+L G+ G + EG K+ F EKDGIDYAATTVQLPGGERVPFLFTVKELVA AA GN++ PGFQFGG F Sbjct: 36 VNMSMTAQDDFKNVAVGALAVFAGLSFFGAPA-ADAITKDQIDSLSYMQVKGTGLANRCPEVIGTESINVNG--KMKLMDLCIEPKVFQVLEETATKKGETKKEYVNTKLMTRQTYTLYGIEGSFAPEEG-KLTFREKDGIDYAATTVQLPGGERVPFLFTVKELVAKAATSGNSVAPGFQFGGGF 217
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|98962678|gb|ABF59672.1| (photosystem II extrinsic protein O [Vaucheria litorea] >gi|193870778|gb|ACF22979.1| chloroplast photosystem II extrinsic protein O [Vaucheria litorea] >gi|193870780|gb|ACF22980.1| photosystem II extrinsic protein O [Elysia chlorotica]) HSP 1 Score: 215.698 bits (548), Expect = 7.041e-66 Identity = 116/186 (62.37%), Postives = 137/186 (73.66%), Query Frame = 0 Query: 45 MNVQPSFLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSF 230 M+VQ D +K AL +L G S AP A+TK+ + SLSYLQVKGTGLANRCPEV G GSI + G KT ++ D+C+EPKT+QV EE ++KRGE K +VNTKLMTRQTY+L G+ G + E GKI F EKDGIDYAATT+QLPGGERVPFLFTVKELVA A PGN++ PG QFGG F Sbjct: 39 MSVQ----DDIKTLAVGALTILAGVSILNAPV--EAITKDQIESLSYLQVKGTGLANRCPEVFGTGSIDVNG-KT-KIVDMCIEPKTFQVLEETSSKRGEAKKEYVNTKLMTRQTYTLYGIDGSFAP-ENGKITFREKDGIDYAATTIQLPGGERVPFLFTVKELVAQATTPGNSVTPGLQFGGPF 215
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|318610510|dbj|BAJ61701.1| (oxygen-evolving enhancer protein [Botrydium granulatum]) HSP 1 Score: 212.231 bits (539), Expect = 1.906e-64 Identity = 108/163 (66.26%), Postives = 136/163 (83.44%), Query Frame = 0 Query: 69 GSAFLAPSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFK 231 G +FLA + + A+TK+ + SLSY+QVKGTGLANRCPEVVGEG+I + GKT ++ DLC+EPK +QV EE ++++GE K +VNTKLMTRQTY+L G+ GD++ E GK+ F EKDGIDYAATTVQLPGGERVPFLFTVKELVA AA+ G+++ PGFQFGG+FK Sbjct: 59 GLSFLA-APAEAITKDQIDSLSYMQVKGTGLANRCPEVVGEGTINV-AGKT-KIVDLCIEPKVFQVLEESSSRKGEVKKEYVNTKLMTRQTYTLYGIEGDLT-SEDGKLVFTEKDGIDYAATTVQLPGGERVPFLFTVKELVAKAAKGGSSVAPGFQFGGAFK 217
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|32130541|gb|AAN11311.1| (oxygen-evolving enhancer 1 [Heterosigma akashiwo]) HSP 1 Score: 204.527 bits (519), Expect = 1.148e-61 Identity = 105/158 (66.46%), Postives = 122/158 (77.22%), Query Frame = 0 Query: 75 PSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKV 232 P + A+TK + +SL YLQVKGTGLANRC EV+G SI + G K QL DLC+EPKT+QVEEE K G K+FVNTKLMTRQTY+LDG+SG IS + GKI F E+DGIDYAA+TVQ PGGERVPFLFTVKELVATA+ G+ + PGFQ GG F V Sbjct: 46 PMSAFAITKAESNSLDYLQVKGTGLANRCSEVIGTDSITISGKK--QLVDLCIEPKTFQVEEEKVAKSGSIQKAFVNTKLMTRQTYTLDGISGTIS-SKDGKIVFTEEDGIDYAASTVQKPGGERVPFLFTVKELVATASTSGDKIAPGFQMGGKFTV 200
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|318610532|dbj|BAJ61704.1| (oxygen-evolving enhancer protein [Kryptoperidinium foliaceum]) HSP 1 Score: 200.29 bits (508), Expect = 5.488e-60 Identity = 110/193 (56.99%), Postives = 142/193 (73.58%), Query Frame = 0 Query: 48 QPSFLDQLKNGVSKALPVLVGGSAFLA--PSISNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC 238 Q + L LK+ ++ A V + G+A L+ + ALTK +++ L+YLQVKGTGLANRCPEVVGE +I+ + G+ +L D+C+EPK W VEEE+ K G+T K FVN+K++TRQTY+LDG+ G +S EGG I F+EK+GIDYAATTVQLPGGERVPFLFTVK+LVA G + KPGFQ GG F V S+R Sbjct: 26 QNTALFSLKDDLANAGKVALAGAAALSIMAQPAQALTKSEINELTYLQVKGTGLANRCPEVVGEDTISPKNGQ--KLVDMCIEPKAWAVEEEI-GKAGKTEKKFVNSKVVTRQTYTLDGIEGVLS-SEGGNIVFKEKEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDFSV-PSYRT 211
BLAST of EWM24380.1 vs. NCBI_GenBank
Match: gi|28565363|gb|AAO43192.1| (oxygen-evolving enhancer protein 1 precursor, partial [Phaeodactylum tricornutum]) HSP 1 Score: 199.904 bits (507), Expect = 8.160e-60 Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 0 Query: 78 SNALTKEDLSSLSYLQVKGTGLANRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERVPFLFTVKELVATAAQPGNALKPGFQFGGSF 230 +NALTK ++ LSYLQVKGTGLANRCPEVVGE SI +GG+ +L D+C+EPK W VEEE+ K G T K FVN+K+MTRQTY+LDG+ G + EGG I F+E++GIDYAATTVQLPGGERVPFLFTVK+LVA G + KPGFQ GG F Sbjct: 59 ANALTKSQINELSYLQVKGTGLANRCPEVVGEDSITPKGGQ--RLVDMCIEPKAWAVEEEI-GKAGRTEKKFVNSKVMTRQTYTLDGIEGALK-SEGGSIVFQEQEGIDYAATTVQLPGGERVPFLFTVKDLVAKGN--GGSFKPGFQMGGDF 205 The following BLAST results are available for this feature:
BLAST of EWM24380.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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