EWM24387.1, cds6289 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|585105787|gb|EWM24387.1| (putative ras family gtp binding protein [Nannochloropsis gaditana]) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query: 1 MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS 259
MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS
Sbjct: 1 MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS 259
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|553192305|ref|XP_005855548.1| (Ras-like protein [Nannochloropsis gaditana CCMP526] >gi|422293514|gb|EKU20814.1| Ras-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
Query: 1 MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS 259
MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAK KSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFR+LLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS
Sbjct: 1 MPPSSTSPRPPPSLRPPPLLGVVHRKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKGKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRMLLEEVERGEAGEGKGKWSLLGGEEEEQAFLGCRHERERSWEYDGYGYCVVS 259
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|1129841221|emb|SHO79307.1| (Similar to S.cerevisiae protein RHB1 (Putative Rheb-related GTPase) [Malassezia sympodialis ATCC 42132]) HSP 1 Score: 142.124 bits (357), Expect = 1.546e-38 Identity = 82/197 (41.62%), Postives = 118/197 (59.90%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEG 221
RK AV+G R GKSS+ RFV++ F + P E+++ K ++ +G+E CDIVDT G ++E+S S++A IGIHGY+LVY I SR SF +IQT+ + +L Y G S +P VL+G K DL AQRQV + EG+ALA++L ++E SA+HN +V + F L+L E+E+ A G
Sbjct: 10 RKIAVLGSRSVGKSSLVVRFVEDAFV--DSYYPTIENVFEKTVKYKGQEYN----------------CDIVDTAG---------QDEYSILNSKHA-IGIHGYVLVYSIASRASFEMIQTVYDKILNYTGTSTIPCVLVGQKSDLHAQRQVPEAEGKALAQSLHCAWVEASARHNANVTKVFELVLAEIEKASAPGG 178
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|164655341|ref|XP_001728801.1| (hypothetical protein MGL_4136 [Malassezia globosa CBS 7966] >gi|159102685|gb|EDP41587.1| hypothetical protein MGL_4136 [Malassezia globosa CBS 7966]) HSP 1 Score: 139.428 bits (350), Expect = 2.517e-37 Identity = 79/194 (40.72%), Postives = 116/194 (59.79%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEA 218
RK AV+G R GKSS+ RFV++ F + P E+++ K ++ G++ CDIVDT G ++E+S S++A IGIHGY+LVY I SR SF +IQT+ + +L Y G S VP VL+G K DL +QRQV + EG+ALA++L ++E SA+HN +V + F L+L E+E+ +
Sbjct: 13 RKIAVLGSRSVGKSSLVVRFVEDAFV--DSYYPTIENVFEKTVKHRGQDFQ----------------CDIVDTAG---------QDEYSILNSKHA-IGIHGYVLVYSIASRTSFEMIQTVYDKILNYTGTSTVPCVLVGQKSDLHSQRQVSEAEGKALAQSLHCAWIETSARHNANVAKVFELVLAEIEKASS 178
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|1063861338|ref|XP_017991147.1| (rheb gtpase rhb1 [Malassezia pachydermatis] >gi|924815379|gb|KOS13515.1| rheb gtpase rhb1 [Malassezia pachydermatis]) HSP 1 Score: 138.658 bits (348), Expect = 4.958e-37 Identity = 78/198 (39.39%), Postives = 117/198 (59.09%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERGEAGEGK 222
RK AV+G R GKSS+ R+V++ F + P E+++ K ++ +G+E CDIVDT G ++E+S S++A IGIHGY+LVY I SR SF +IQT+ + +L Y G S +P VL+G K DL + RQV + EG+ LA++L ++E SA+HN +V + F L+L E+E+ A G+
Sbjct: 13 RKIAVLGSRSVGKSSLVVRYVEDAFV--DSYYPTIENVFEKTIKYKGQEYS----------------CDIVDTAG---------QDEYSILNSKHA-IGIHGYVLVYSIASRASFEMIQTVYDKILNYTGTSTIPCVLVGQKSDLHSHRQVSEAEGKELAQSLHCAWIETSARHNANVAKVFELVLAEIEKASAPGGQ 182
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|630968084|ref|XP_007880450.1| (hypothetical protein PFL1_04731 [Anthracocystis flocculosa PF-1] >gi|521583830|gb|EPQ27593.1| hypothetical protein PFL1_04731 [Anthracocystis flocculosa PF-1]) HSP 1 Score: 137.117 bits (344), Expect = 2.022e-36 Identity = 76/192 (39.58%), Postives = 114/192 (59.38%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERG 216
RK AV+G R GKSS+ R+V++ F A P E++++KV+ +G+E CDI+DT G ++E+S S++A IGIHGY+LVY I SR SF +IQT+ + +L Y G VP V++G K DL QRQV + +G+AL++ L ++E SA+HN +V + F L+L + E+G
Sbjct: 14 RKIAVLGSRSVGKSSLIVRYVEDAFV--DAYYPTIENIFQKVITYKGQEYD----------------CDIIDTAG---------QDEYSILNSKHA-IGIHGYVLVYSIASRNSFEMIQTVYDKILNYTGTEHVPCVIVGQKSDLHVQRQVSEADGKALSQQLQCAWIETSARHNANVAKVFELMLSQTEKG 177
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|673529330|emb|CDI55593.1| (probable ras-related GTP-binding protein [Melanopsichium pennsylvanicum 4]) HSP 1 Score: 136.732 bits (343), Expect = 2.743e-36 Identity = 75/192 (39.06%), Postives = 113/192 (58.85%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERG 216
RK AV+G R GKSS+ R+V++ F + P E++++K + +G+E CDI+DT G ++E+S S++A IGIHGY+LVY I SR SF ++QT+++ +L Y G VP V++G K DL QRQV + EG+ LA L ++E+SA+HN +V RAF +L E ++G
Sbjct: 13 RKIAVLGSRSVGKSSLIVRYVEDAFV--DSYYPTIENIFQKTITHKGQEYD----------------CDIIDTAG---------QDEYSILNSKHA-IGIHGYMLVYSIASRNSFDMVQTVHDKILNYTGTESVPCVIVGQKSDLHVQRQVSEAEGKQLANQLKAAWIEVSARHNANVARAFEAMLGETDKG 176
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|343426019|emb|CBQ69551.1| (probable ras-related GTP-binding protein [Sporisorium reilianum SRZ2]) HSP 1 Score: 134.806 bits (338), Expect = 1.356e-35 Identity = 74/192 (38.54%), Postives = 112/192 (58.33%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERG 216
RK AV+G R GKSS+ R+V++ F + P E++++K + G+E CDI+DT G ++E+S S++A IGIHGY+LVY I SR SF ++QT+++ +L Y G VP +++G K DL QRQV + EG+ LA L ++E+SA+HN +V +AF +L E +RG
Sbjct: 14 RKIAVLGSRSVGKSSLIVRYVEDAFV--DSYYPTIENIFQKTITHRGQEYD----------------CDIIDTAG---------QDEYSILNSKHA-IGIHGYMLVYSIASRNSFDMVQTVHDKILNYTGTESVPCIIVGQKSDLHVQRQVSEAEGKQLAAQLKAAWIEVSARHNANVAKAFEAMLGETDRG 177
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|1098869227|emb|SAM85439.1| (probable ras-related GTP-binding protein [Ustilago bromivora]) HSP 1 Score: 134.42 bits (337), Expect = 1.859e-35 Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERG 216
RK AV+G R GKSS+ R+V++ F + P E++++K + +G+E CDI+DT G ++E+S S++A IGIHGY+LVY I SR SF ++QT+++ +L Y G VP +++G K DL QRQV + EG+ LA+ L ++E+SA+HN +V +AF +L E ++G
Sbjct: 13 RKIAVLGSRSVGKSSLIVRYVEDAFV--DSYYPTIENIFQKTITHKGQEYD----------------CDIIDTAG---------QDEYSILNSKHA-IGIHGYMLVYSIASRNSFDMVQTVHDKILNYTGTESVPCLIVGQKSDLHVQRQVSEAEGKQLAQQLKAAWIEVSARHNANVAKAFEAMLGETDKG 176
BLAST of EWM24387.1 vs. NCBI_GenBank
Match: gi|388856959|emb|CCF49379.1| (probable ras-related GTP-binding protein [Ustilago hordei]) HSP 1 Score: 134.42 bits (337), Expect = 2.004e-35 Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 0
Query: 25 RKFAVVGHRGAGKSSVTRRFVQEKFTIQSAADPDEESLYRKVLETEGEERGVAKRKSSHEKTTQLVCCDIVDTPGPTRQYTEYAKEEFSRFLSRNALIGIHGYLLVYDITSRESFTIIQTLNEVVLRYHGDSPVPRVLLGGKLDLCAQRQVGKGEGRALARTLGIPFLEISAKHNVDVERAFRLLLEEVERG 216
RK AV+G R GKSS+ R+V++ F + P E++++K + +G+E CDI+DT G ++E+S S++A IGIHGY+LVY I SR SF ++QT+++ +L Y G VP +++G K DL QRQV + EG+ LA+ L ++E+SA+HN +V +AF +L E ++G
Sbjct: 13 RKIAVLGSRSVGKSSLIVRYVEDAFV--DSYYPTIENIFQKTITHKGQEYD----------------CDIIDTAG---------QDEYSILNSKHA-IGIHGYMLVYSIASRNSFDMVQTVHDKILNYTGTESVPCLIVGQKSDLHVQRQVSEAEGKQLAQQLKAAWIEVSARHNANVAKAFEAMLGETDKG 176 The following BLAST results are available for this feature:
BLAST of EWM24387.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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