EWM24388.1, cds6285 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|553192294|ref|XP_005855545.1| (oxidoreductase htatip2 [Nannochloropsis gaditana CCMP526] >gi|422293511|gb|EKU20811.1| oxidoreductase htatip2 [Nannochloropsis gaditana CCMP526] >gi|585105788|gb|EWM24388.1| oxidoreductase htatip2 [Nannochloropsis gaditana]) HSP 1 Score: 483.411 bits (1243), Expect = 1.485e-172 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMAKKDL 239 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMAKKDL Sbjct: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMAKKDL 239
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|676465966|ref|XP_009057414.1| (hypothetical protein LOTGIDRAFT_217236 [Lottia gigantea] >gi|556103088|gb|ESO91740.1| hypothetical protein LOTGIDRAFT_217236 [Lottia gigantea]) HSP 1 Score: 222.631 bits (566), Expect = 1.416e-69 Identity = 115/239 (48.12%), Postives = 151/239 (63.18%), Query Frame = 0 Query: 2 STVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELP----AGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMAK 236 VA FK H AFVVG+TGE GKE+V + A D ++KV LIGRR E+P +G YE Q+++DFD+L F D D+GFCCLGTT+ KSG GF+KVDY+Y+L + AK+ G + F +V+S G++ S M Y KTKG+ EE LK RLS+YRPGVL+CNR E R + R FL PVAA+ PTA+T P + + +AM +N+V+ E E EN AIH +AK Sbjct: 7 DNVAEFKERKHKAFVVGYTGESGKELVKQIQAADIFEKVVLIGRR--EVPPENISGVDYE---QKVVDFDNL------EQHAEVFNDCDIGFCCLGTTKAKSGAAGFLKVDYDYILSVGQIAKSKGCKHFSLVSSQGADKESSMFYLKTKGQVEEALKNHQFQRLSVYRPGVLMCNRQESRPGEAIARLFLKPVAALFPTAITTPVETLAKAM-INNVMMKSEKTYEIYENKAIHELAK 233
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|908409396|ref|XP_013065725.1| (PREDICTED: oxidoreductase HTATIP2-like isoform X2 [Biomphalaria glabrata] >gi|908409398|ref|XP_013065726.1| PREDICTED: oxidoreductase HTATIP2-like isoform X2 [Biomphalaria glabrata]) HSP 1 Score: 219.935 bits (559), Expect = 1.998e-68 Identity = 108/235 (45.96%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 +++ FK+ GH AFV+G+TGEVGK +V L +KKV LIGRR L GP +E Q+++DF+++ F + D+GFCCLGTTR KSGV GFI+VD++YVL AA AKA G + F +V+S G++ S LYP+TKG+ EE LK + RLSIYRPGVL+C+R E R ++ A R L P++ PTA+T P +++ RAM +N+ + TE +N AIH ++ Sbjct: 6 LTSHEKFKSEGHTAFVLGYTGEVGKVLVEELNDLKLFKKVVLIGRRQIPLNLGPEFE---QKVIDFENIDEHKD------VFENLDIGFCCLGTTRAKSGVQGFIRVDHDYVLLAAEIAKAQGCKHFSLVSSQGADKNSSFLYPRTKGQVEEALKVMHFNRLSIYRPGVLMCDRQESRPMEAAVRVVLKPLSYFFPTAITTPVQIMARAM-INNAISSTNISTELYDNKAIHQLS 230
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|908409394|ref|XP_013065724.1| (PREDICTED: oxidoreductase HTATIP2-like isoform X1 [Biomphalaria glabrata]) HSP 1 Score: 219.935 bits (559), Expect = 9.193e-68 Identity = 108/235 (45.96%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 +++ FK+ GH AFV+G+TGEVGK +V L +KKV LIGRR L GP +E Q+++DF+++ F + D+GFCCLGTTR KSGV GFI+VD++YVL AA AKA G + F +V+S G++ S LYP+TKG+ EE LK + RLSIYRPGVL+C+R E R ++ A R L P++ PTA+T P +++ RAM +N+ + TE +N AIH ++ Sbjct: 52 LTSHEKFKSEGHTAFVLGYTGEVGKVLVEELNDLKLFKKVVLIGRRQIPLNLGPEFE---QKVIDFENIDEHKD------VFENLDIGFCCLGTTRAKSGVQGFIRVDHDYVLLAAEIAKAQGCKHFSLVSSQGADKNSSFLYPRTKGQVEEALKVMHFNRLSIYRPGVLMCDRQESRPMEAAVRVVLKPLSYFFPTAITTPVQIMARAM-INNAISSTNISTELYDNKAIHQLS 276
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|291245044|ref|XP_002742403.1| (PREDICTED: oxidoreductase HTATIP2-like [Saccoglossus kowalevskii]) HSP 1 Score: 217.624 bits (553), Expect = 3.689e-67 Identity = 112/234 (47.86%), Postives = 149/234 (63.68%), Query Frame = 0 Query: 2 STVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 S A+F+ +AFVVG+TGEVGKE+V LA ++ + KV L+GRR E + +EQ+++DFD L F D DVGFCCLGTTRGKSGV+GF KVD++YVL A AK G Q F+++TSVG+N S LYP+TKG E + +L +RLSIYRP +LLC+R E R + + L+PV +APTA++VPT V +AMV N V + E EN AIH ++ Sbjct: 47 SNKASFQEKQQSAFVVGYTGEVGKELVKELATSNIFSKVTLLGRRVVEY-EDEKLKSLEQKVVDFDKL------DEYEDLFKDHDVGFCCLGTTRGKSGVEGFKKVDHDYVLKTAELAKKTGCQHFNLLTSVGANKNSSFLYPRTKGLVESEITDLDFSRLSIYRPSMLLCDRTESRPGEWVLKKLLSPVTYLAPTAISVPTSTVAKAMVNNCVAPPGDKKVEIFENKAIHQIS 273
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|871236039|ref|XP_012938592.1| (PREDICTED: oxidoreductase HTATIP2-like isoform X2 [Aplysia californica]) HSP 1 Score: 215.698 bits (548), Expect = 1.616e-66 Identity = 109/235 (46.38%), Postives = 150/235 (63.83%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 +S++ FK+ H AFV+G++GEVGK +V L +K+V LIGRR L GP +E QR++DF++L AF D D+GFCCLGTTRGKSGV GFI+VD++YVL +A AKA + F +V+S G+N S LYP+TKG+ EE LK + RLSIYRPG+L+ +R E R ++ R L PV+ PTA+T P KV+ AM+ N ++ G E +N AIH ++ Sbjct: 18 LSSLERFKSENHTAFVLGYSGEVGKALVEELNQLKVFKRVVLIGRRQVPLSVGPEFE---QRVVDFENLDDHKD------AFKDLDMGFCCLGTTRGKSGVPGFIRVDHDYVLLSAEIAKAHSCKHFSLVSSQGANKNSSFLYPRTKGQVEEALKVMHFDRLSIYRPGLLMVDRQESRPMEATLRTLLRPVSYFFPTAVTTPVKVMALAMINNGMVAG--DKVEVYDNKAIHQLS 241
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|871236036|ref|XP_012938591.1| (PREDICTED: oxidoreductase HTATIP2-like isoform X1 [Aplysia californica]) HSP 1 Score: 215.312 bits (547), Expect = 6.447e-66 Identity = 109/235 (46.38%), Postives = 150/235 (63.83%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 +S++ FK+ H AFV+G++GEVGK +V L +K+V LIGRR L GP +E QR++DF++L AF D D+GFCCLGTTRGKSGV GFI+VD++YVL +A AKA + F +V+S G+N S LYP+TKG+ EE LK + RLSIYRPG+L+ +R E R ++ R L PV+ PTA+T P KV+ AM+ N ++ G E +N AIH ++ Sbjct: 52 LSSLERFKSENHTAFVLGYSGEVGKALVEELNQLKVFKRVVLIGRRQVPLSVGPEFE---QRVVDFENLDDHKD------AFKDLDMGFCCLGTTRGKSGVPGFIRVDHDYVLLSAEIAKAHSCKHFSLVSSQGANKNSSFLYPRTKGQVEEALKVMHFDRLSIYRPGLLMVDRQESRPMEATLRTLLRPVSYFFPTAVTTPVKVMALAMINNGMVAG--DKVEVYDNKAIHQLS 275
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|405972388|gb|EKC37161.1| (Oxidoreductase HTATIP2 [Crassostrea gigas]) HSP 1 Score: 209.92 bits (533), Expect = 2.437e-64 Identity = 112/236 (47.46%), Postives = 146/236 (61.86%), Query Frame = 0 Query: 2 STVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPA--GPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 + FK GH+AFV+G+TGE+GK +V L A+K+V L+GRR + G G+E +R++DFD+L AFA DVGF LGTTR KSG GF+KVD++YVL A AKA G + F +S GS+ S +LY +TKG+AEE LK + RLSI+RPG+LLC+R E R + R L PV PTA++ PT+VV RAMV N++ E TE EN AIH MA Sbjct: 7 QNLENFKKEGHSAFVIGYTGEIGKVLVKELDEVKAFKRVVLVGRRQTNITQKLGAGFE---ERVVDFDNL------DDYKEAFAGCDVGFNTLGTTRAKSGAQGFVKVDHDYVLKTAEIAKASGCKHFLHTSSQGSDKNSSLLYTRTKGQAEESLKVIHFDRLSIFRPGILLCDREESRPSESFFRTVLKPVFYFFPTAISTPTEVVARAMVNNAISPPSENRTELFENKAIHMMA 233
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|1207985573|ref|XP_021342486.1| (oxidoreductase HTATIP2-like [Mizuhopecten yessoensis] >gi|1207985575|ref|XP_021342488.1| oxidoreductase HTATIP2-like [Mizuhopecten yessoensis] >gi|1205813330|gb|OWF35470.1| Oxidoreductase HTATIP2 [Mizuhopecten yessoensis]) HSP 1 Score: 208.379 bits (529), Expect = 5.886e-64 Identity = 110/238 (46.22%), Postives = 147/238 (61.76%), Query Frame = 0 Query: 1 MSTVAAFKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPAGPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMAKKD 238 + V +K G AF++G+TGE GKE+V +L+ + KV LIGRR E+ PG E EQ+++D+D L AF VG+CCLGTTR K+G +GFIKVD +YVL +A AK+ G Q F VVT+ S+ S LY KTKG EEGLK + +LSI+RP +LLC+R+E RL + R P A + PT +VPT VGRAMVV++V+ G + T NA IH + K+D Sbjct: 6 QNKVKQYKEMGKTAFIIGYTGECGKELVKALSKNKIFSKVVLIGRRKVEISPDPGPE-FEQKVVDYDKL------EEYTEAFQGNQVGYCCLGTTRHKAGKEGFIKVDRDYVLKSAEIAKSTGCQHFSVVTASTSDKNSMFLYVKTKGEVEEGLKGMGFDKLSIFRPAMLLCDRSESRLGETFARACFKPWAYLFPTVGSVPTSYVGRAMVVDTVMPG-DDKIRTYSNAEIHGLIKQD 235
BLAST of EWM24388.1 vs. NCBI_GenBank
Match: gi|762169381|ref|XP_011423094.1| (PREDICTED: oxidoreductase HTATIP2 [Crassostrea gigas]) HSP 1 Score: 208.764 bits (530), Expect = 2.885e-63 Identity = 112/231 (48.48%), Postives = 145/231 (62.77%), Query Frame = 0 Query: 7 FKAGGHNAFVVGWTGEVGKEVVSSLAATDAYKKVYLIGRRNAELPA--GPGYEKMEQRILDFDSLLTDPPSPATIAAFADADVGFCCLGTTRGKSGVDGFIKVDYEYVLGAARAAKAGGLQAFHVVTSVGSNAASRMLYPKTKGRAEEGLKELSLARLSIYRPGVLLCNRAEKRLLDQAGRFFLAPVAAVAPTAMTVPTKVVGRAMVVNSVLGGVEGGTETLENAAIHAMA 235 FK GH+AFV+G+TGE+GK +V L A+K+V L+GRR + G G+E +R++DFD+L AFA DVGF LGTTR KSG GF+KVD++YVL A AKA G + F +S GS+ S +LY +TKG+AEE LK + RLSI+RPG+LLC+R E R + R L PV PTA++ PT+VV RAMV N++ E TE EN AIH MA Sbjct: 60 FKKEGHSAFVIGYTGEIGKVLVKELDEVKAFKRVVLVGRRQTNITQKLGAGFE---ERVVDFDNL------DDYKEAFAGCDVGFNTLGTTRAKSGAQGFVKVDHDYVLKTAEIAKASGCKHFLHTSSQGSDKNSSLLYTRTKGQAEESLKVIHFDRLSIFRPGILLCDREESRPSESFFRTVLKPVFYFFPTAISTPTEVVARAMVNNAISPPSENRTELFENKAIHMMA 281 The following BLAST results are available for this feature:
BLAST of EWM24388.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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