EWM24389.1, cds6284 (CDS) Nannochloropsis gaditana

Overview
NameEWM24389.1
Unique Namecds6284
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:201139..201507 +

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Properties
Property NameValue
Start range201139
Start range.
Protein idEWM24389.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_103880g1.881.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:201139..201507 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24389.1 vs. NCBI_GenBank
Match: gi|585105790|gb|EWM24389.1| (hypothetical protein Naga_103880g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 217.238 bits (552), Expect = 3.829e-71
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 PFLPPSPFLPISKTPLPSRSLSYILNPAQPSPPSSPSSLPPSLPPSPLPPSLPPVQLGFPGPSVWHARPSPPPLPPLPLRLPFPPPTGPTPSAATWEGGSSAFLLHCPARNARHARQQGEGG 122
            PFLPPSPFLPISKTPLPSRSLSYILNPAQPSPPSSPSSLPPSLPPSPLPPSLPPVQLGFPGPSVWHARPSPPPLPPLPLRLPFPPPTGPTPSAATWEGGSSAFLLHCPARNARHARQQGEGG
Sbjct:    1 PFLPPSPFLPISKTPLPSRSLSYILNPAQPSPPSSPSSLPPSLPPSPLPPSLPPVQLGFPGPSVWHARPSPPPLPPLPLRLPFPPPTGPTPSAATWEGGSSAFLLHCPARNARHARQQGEGG 122
The following BLAST results are available for this feature:
BLAST of EWM24389.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105790|gb|EWM24389.1|3.829e-71100.00hypothetical protein Naga_103880g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6299rna6299Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications