EWM24400.1, cds6275 (CDS) Nannochloropsis gaditana

Overview
NameEWM24400.1
Unique Namecds6275
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:180421..180440 +
Alignment locationCM002468.1:180539..180692 +
Alignment locationCM002468.1:180862..180984 +
Alignment locationCM002468.1:181345..181380 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24400.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100911g1.7365.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:180421..180440 +
CM002468.1supercontigCM002468.1:180539..180692 +
CM002468.1supercontigCM002468.1:180862..180984 +
CM002468.1supercontigCM002468.1:181345..181380 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24400.1 vs. NCBI_GenBank
Match: gi|585105803|gb|EWM24400.1| (hypothetical protein Naga_100911g1 [Nannochloropsis gaditana])

HSP 1 Score: 226.868 bits (577), Expect = 3.156e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 
Query:    1 MYLWGRGASADIPSSPSSSSSLSSTWDEEDLRSRYTLEYWEELYGRLRHARDPRSFDQEEVVRIVRLIAQLLMLGEGMEDERMFEFFGQRNLLPAFCQMTRCTICSLKTA 110
            MYLWGRGASADIPSSPSSSSSLSSTWDEEDLRSRYTLEYWEELYGRLRHARDPRSFDQEEVVRIVRLIAQLLMLGEGMEDERMFEFFGQRNLLPAFCQMTRCTICSLKTA
Sbjct:    1 MYLWGRGASADIPSSPSSSSSLSSTWDEEDLRSRYTLEYWEELYGRLRHARDPRSFDQEEVVRIVRLIAQLLMLGEGMEDERMFEFFGQRNLLPAFCQMTRCTICSLKTA 110
The following BLAST results are available for this feature:
BLAST of EWM24400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105803|gb|EWM24400.1|3.156e-75100.00hypothetical protein Naga_100911g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6290rna6290Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications