EWM30046.1, cds627 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|585112676|gb|EWM30046.1| (choline dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 1248.42 bits (3229), Expect = 0.000e+0 Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0 Query: 1 MRFSLSLCLSLALPSIACTDFDFSSRKYPRRLKEALPCLDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRWGLEHWGGEETTAYFRKLEDHEDINPEYGKNGPVHVERGDAQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLALGCANLKVHGPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGDVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKEDNQD 605 MRFSLSLCLSLALPSIACTDFDFSSRKYPRRLKEALPCLDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRWGLEHWGGEETTAYFRKLEDHEDINPEYGKNGPVHVERGDAQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLALGCANLKVHGPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGDVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKEDNQD Sbjct: 1 MRFSLSLCLSLALPSIACTDFDFSSRKYPRRLKEALPCLDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRWGLEHWGGEETTAYFRKLEDHEDINPEYGKNGPVHVERGDAQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLALGCANLKVHGPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGDVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKEDNQD 605
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|1113396910|gb|OJW59818.1| (hypothetical protein BGO57_05005 [Sphingomonadales bacterium 63-6]) HSP 1 Score: 212.231 bits (539), Expect = 9.789e-58 Identity = 193/594 (32.49%), Postives = 271/594 (45.62%), Query Frame = 0 Query: 39 LDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDH-EDINPEYGKNGPVHVERGDAQT-MYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTD-------QYDLERRGPYSLGALGIYS-VVKGRKSEEDDYIMFMTDV-------IPEVA----PRMLALGCANLKVHGPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMG----DVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKEDNQ 604 DY+VVGAG+AG V+A RLSEDPA RVLLLE G G+ +R + ++ P + W P LT +E P L R PV GK LGG++++N R +D W GL WG + YFRKLE H P +G GP+ V+ A + + + EA+ M P+ G + G ++ G R A AYLR + NL +RT A TRI+FD ATG+ ++ + EK AH T REVIL G +P LLL SG+GPA EL +G+PV+ D P VG +LM G G + P D ++ + ++ P+ L I + V G + D + + + P +A PRM A+ N G + L A DP HPRI+ N+ +AEEDR + R +R ++A+P +A++ + P E ++ E L R ++H + T RMG VLD LRV GV GLRVVDAS P++ + M+ ERAAD IK ++ Sbjct: 4 FDYIVVGAGSAGCVMANRLSEDPACRVLLLEAG---------GSDRRMD-----VTIPLAVSKLWPNPDLTWGFFSEEEPELEGRRL----PVARGKMLGGTSSLNGMMAIRGHRRDYDGWRDSGLPGWGWNDVLPYFRKLESHWRGDTPMHGGKGPLCVQPHPAPSPLMANAVEAARAMGFPITMDFNGERTDGFGMPDFTIKDGRRHSAADAYLRPALS--RPNLEIRTHALATRILFD-GKHATGLAWMQGN----------------------EEKQAHAT------REVILSGGAINSPQLLLLSGIGPAGELAEMGIPVLHDSPDVGGNLMDHP------GAGMELDLAPPLAFEKQLRLDRLMLSGLRWLMRQKSPFGAPPLAISANVATGADPDLVDLHILLIPLAMESRVWFPGIAKPFGPRMGAMWSLNYPKS--RGWLKLAAPDPRA--HPRIRFNLLSAEEDRAEMMRGYRTLRQLLAQPALADVTGAIRRP-EVAPESDEDVLA--YVRATAATAYHPSGTCRMGSDERSVLDGELRVN-GVDGLRVVDASIFPSLPGGNTNLPVIMVAERAADFIKASHR 534
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|492479379|ref|WP_005859391.1| (choline dehydrogenase [Sagittula stellata] >gi|126708727|gb|EBA07783.1| choline dehydrogenase [Sagittula stellata E-37]) HSP 1 Score: 211.075 bits (536), Expect = 2.651e-57 Identity = 185/584 (31.68%), Postives = 268/584 (45.89%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQ---ISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPE-YGKNGPVHVER-GDAQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPA-TTDQYDLERRGPYSLGALGIYSVVKGRKS-EEDDYIMFMTDV-------IPEVAPRMLALGCANLKVHGPG--GQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGD----VLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIK 600 DY+VVGAG +G V+AARLSEDPA +VLLLE +G R W+ + +H W TE P L+ R L G+ LGGS AIN R P+ ++ W GL W E+ YFR+LE H + +G++GP+ + R D Q +Y +A++ P + G+ ++ A+ G R YL A AR NL + TGAR R++ D + RA+GVE+++ D RV QA+A REVILCAG + +PHLLL SG+GPA L +GVP+ DLPGVG +L N + + +N + A + ++ + R+G + + ++ R+ + D + + + P + PR + + P G+V L + DP +A PRIQLN+ +D R + +R R + P M + E P +L ++E A R H T MG+ V DS L+V GV GLRVVDAS +P+ ML ERAADLI+ Sbjct: 5 DYIVVGAGPSGCVLAARLSEDPACKVLLLE----------AGPPDRHPWLRMPFAFMKMAQHRRYIWR-------FRTEPEPGLDGRRVDL----RRGRTLGGSAAINGMICARGHPSDWNGWAQSGLAGWSYEDVLPYFRRLESHWSPDASVHGQSGPIGITRVDDPQMLYPAFRDAALEAGWPEREDYLAGETEGISRIQLAIADGERQTPARRYL-GPARARP-NLTILTGARGLRVLRDGT-RASGVEFLHHD---------------RVE-------------QAHADREVILCAGAYMSPHLLLLSGIGPADHLAEMGVPLWTDLPGVGGNLSEHPNFVMSWETRQPETLLNALRWDRAALSVAKWHISRQGTFVNNGATAVAFLRSREGLDRPDVQLILMPIDGSARTWFPALRPRTRHCLSVRVGILYPQSRGRVSLASSDPRDA--PRIQLNLMKETDDVRTLTAAIRATRAIFETPAMQKVVKCEISPGRQLESDTEIAQ---AIRENAHVRQHPLGTCAMGNGPLAVTDSTLKVH-GVDGLRVVDASVLPSEPGGNTNLPSIMLAERAADLIR 530
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|1176097340|ref|XP_020619304.1| (choline dehydrogenase, mitochondrial-like [Orbicella faveolata]) HSP 1 Score: 211.075 bits (536), Expect = 8.320e-57 Identity = 191/623 (30.66%), Postives = 276/623 (44.30%), Query Frame = 0 Query: 1 MRFSLSLCLSLALPSIACTDFDFSSRK---YPRRLKEALP---CLDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPEY-GKNGPVHVERG-DAQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTD-QYDLERRGPYSLGALGIYSVVKGRK--SEEDDYIMFMTDVIPEVAPRMLALGCANLKVH----GPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMG------DVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLI 599 R+SL L I+ D++SR P+ K + DY++VG G+AG V+A RLS++P ++VLLLE G S Q +S + + H++ +E L NR+ + P G+ LGGS++IN Y R FDRW G W + YF+K E +E +Y G +GP+ V RG + T++ A P G G+ ++ R V G R TAYL+ E + NL+ T A R++FD+ +A GVEY +A + T + A REVI+C GVF +P LL+ SG+G +L+ALG+PVVA+LPGVGK+L V F V + F L+N Q+ L + G + VK S D + F+ V+ E L L V G V L + DPL HP IQ N + DRR +R C+R R ++++ E P +E +D ++ R Y +H T +MG V+D RV GV LRVVDAS +P+++ A M+ E+AAD I Sbjct: 4 FRYSLRLT---HRAQISRKSLDWNSRASQVQPKSFKSTISFSSTHDYIIVGGGSAGCVLANRLSDNPDLKVLLLEAGP----KDNSWRIQMPAAVSYNLDSDSHNWY----------YTSEPQQNLQNRT--MYHP--RGRVLGGSSSINAMIYARGHAFDFDRWDREGATGWSYADCLPYFKKSETYELGASQYRGGSGPLRVSRGTSSNTLHEVFLAAGTEAGYPFTDDFNGYQQEGVGRLDRTVHDGKRWSTATAYLKPALE--RSNLVTETRALANRVLFDKD-KAIGVEY----------------------------RAGNSTKRVRASREVIICGGVFNSPQLLMLSGIGDEVDLKALGIPVVANLPGVGKNLQDHVQVYVQFECLQPVTLNSAFKLHNKVLAGAQWFLFKNGTCATNHFESGGFVKSDPGVSHPDIALQFVPVVMREAGESDLIQHGYQLCVETLKPSSRGFVKLRSRDPLT--HPVIQPNYLTHDSDRRLMRTCVRIARHVLSQKAFEPYRGKELRPGSTC--KTEDDIDSFV-REYAKTDYHPCGTCKMGADDDPTAVVDKNTRVI-GVDNLRVVDASVMPSVVSGNLNAATIMIAEKAADCI 568
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|1095256580|emb|SEN87031.1| (choline dehydrogenase [Rhodospirillales bacterium URHD0017]) HSP 1 Score: 205.682 bits (522), Expect = 3.315e-55 Identity = 192/588 (32.65%), Postives = 272/588 (46.26%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPEY-GKNGPVHVERGDAQ-TMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNP---ATTDQYDLERRGPYSLGALGIY--SVVKGRKSEE--DDYIMFMTDVIPE-----VAPRML-ALGCANLKVHGPG-GQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMG----DVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKEDNQ 604 D++V GAG+AG VA RLSED RVLLLE G +DS W I P ++T+ P + ++E P LNNR ++ P GK LGG+++IN Y R A +D W G E W + YF++ ED E E+ G GP+ V Q T+ ++EA++ P GR G+ + + R + AYLR EA+ RK NL + T A TR++ E+ RA GVE Y+ P L A A REVI+ GV+ +P LL+ SG+GPA L G+ V+ D+PGVG +L N + V MN + + P QY L R GP L ++G+Y ++V+ K E D I I E V P+ A G + + + G G V L + DPL A P I+ N + D A+ LR RD+ + + E P + D E L I R + H T RMG DV+D +LRV G+ LRV DAS +P+++ A M+GE+ AD++++ Q Sbjct: 7 DFIVTGAGSAGCAVAGRLSEDGRFRVLLLEAG--PKDS--------YPW----IHIPLGYHKTFNNPRVNWMFDSEPEPELNNR--IMYQP--RGKVLGGTSSINGMVYMRGNAADYDEWRQRGCEGWDYDSVLPYFKRAEDQERGPDEFHGVGGPLKVSDHRWQPTLAKAMHEAALQAGIPDNPDFNGRTQEGVGYYQTTINRARRWSSARAYLR-EAKTRK-NLTIATSAHATRVLI-ENGRAVGVE--YRTPDGLK--------------------------TARANREVIVSGGVYGSPQLLMLSGVGPAEHLRKHGIAVIKDMPGVGSNLHDHFNTYVAYKCAQPV-TMNDLINSFPRRILAGMQYALGRTGP--LASMGLYVGALVRSDKRLERPDLQINMFAWAIKERNRHGVVPQPFSAFGLSPVHLRPDGRGTVRLKSADPLAA--PEIRFNFLKSSNDWNAMIQGLRICRDIGKQAALKPFVVEEILPGAGVTD--EPGLRAHI-RANGVSNLHPVGTCRMGRAVEDVVDPQLRVH-GIAALRVADASIMPSIVAGNTNAPSIMIGEKCADMVRQAAQ 536
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|522187021|ref|WP_020695569.1| (hypothetical protein [Reyranella massiliensis]) HSP 1 Score: 203.371 bits (516), Expect = 2.045e-54 Identity = 183/585 (31.28%), Postives = 268/585 (45.81%), Query Frame = 0 Query: 39 LDYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHE-DINPEYGKNGPVHVERGDAQ-TMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNP---ATTDQYDLERRGPYSLGALGIY---SVVKGRKSEEDDYIMFMTDVIPEVAPR-------MLALGCANLKVHGPG-GQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMG----DVLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIK 600 D++V GAG+AG VA RLSED VLLLE +G S WI P ++T+ P + ++E P LNNR ++ P GK LGG+++IN Y R A +D W G E W + YF++ ED+E + +G GP+ V+ Q T+ +++A+V P G G+ + + R + AYLR EA+ R+ NL + T A TR++ E+ RA GVEY + P L A A REVI+ GV+ +P LLL SGLGPA L+ G+ VV D+PGVG HL N + S MN + P Y L R GP L ++G+Y V ++ E D + M + R A G + + + G G V L + DP+ A P I+ N D A+ +R R++ +P + E P + + E AL +++ R + H T RMG DV+D +L+V G+ GLRV DAS +PN++ A M+GE+ AD+++ Sbjct: 6 FDFIVTGAGSAGCAVAGRLSEDGRYSVLLLE----------AGPSDTYPWIH----VPLGYHKTFNNPKVNWMFDSEPEPELNNR--IMYQP--RGKVLGGTSSINGMVYMRGNAADYDEWRQRGCEGWDYDSVLPYFKRAEDNERGADAFHGTGGPLKVQDHRWQPTLAKAMHDAAVEAGIPANPDFNGATQEGVGYYQTTINKARRWSSARAYLR-EAKKRR-NLTIATSAHATRVLI-ENGRAVGVEY--RTPAGLQ--------------------------TARANREVIVSGGVYGSPQLLLLSGLGPAEHLKQHGIDVVRDMPGVGSHLHDHFNTYIAY-KCSQAVTMNDLANSLPRRLLAGAMYALGRTGP--LASMGLYVGAMVRSDKRLERPDLQINMFAWAIKTRDRNGVQAQPFSAFGLSPVHLRPDGRGTVRLKSADPMAA--PEIRFNFLRTANDWNAMLQGMRLCREIGRQPALKPFVVEEIMPGPGVAE--EPALRDYL-RSTGVSNLHPVGTCRMGHGPDDVVDPQLKVH-GIAGLRVADASIMPNIVAGNTNAPSIMIGEKCADMVR 532
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|517734682|ref|WP_018904890.1| (choline dehydrogenase [Variovorax paradoxus]) HSP 1 Score: 202.986 bits (515), Expect = 3.611e-54 Identity = 184/581 (31.67%), Postives = 258/581 (44.41%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHE-DINPEYGKNGPVHVERGDA-QTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATT--------DQYDLERRGPYSLGALGIYSVVKGRKSEE--DDYIMFMTDVIPEVA--PRMLALGCANLKVHGPGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGD----VLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLI 599 D++VVGAG+AGA+VA+RLSED VLLLE G + R WI P +T + TE P L +RS L GK +GGS AIN + R FD W G + WG + YFR+ EDH P +GK GPV V + + + A + G G+ V++G R ++ LR A R+ NL + T A+V RI+F E A GV Y +D R R R A REV+LC+G TP LL+ SG+GP A+L+A +PVVA VG++L + + +P +N+ + ++ +R+GP + A + R+SE D M +P + P + ++ P + ++ D P I N A EEDR+ LR VR ++A P M + SE + + V E+ LD SR T Y H T RMG V+D+ LRV+ GVKGLR+ DAS +P + AT M+GE+AADLI Sbjct: 11 DFIVVGAGSAGAIVASRLSEDGRYSVLLLEAGGWD----------RNPWIH----IPLGVGKTITNKKVNWAFQTEPVPHLGDRSVYLA----CGKVVGGSGAINGMVHVRGQREDFDGWQEAGCDGWGWSDVLPYFRRSEDHYLGDTPLHGKGGPVSVTKSRTPSVLCDHFIAAGINAGLERNDDFNGEKQDGVGVYDHTVRRGLRSNSAIGALR--AAKRRPNLRIETRAQVERILF-EGRTAVGVTY----------------QDARGNSHRVR-----------ASREVVLCSGALNTPKLLMLSGVGPMAQLQAHHLPVVAQSEEVGRNLQDHLAIRV------VCKTRDPITVNDELRSWRKRLLMGARFVFQRQGPLTFAAAQAGMFFRTRESEPQVDAQAFLMPFSVPGIGQYPHPFSAFTVSVTQSWPSSRGRVELRDANPRTPPTIHPNHLATEEDRQFFVRALRKVRAVLATPPMDGV-VSEEYLPGKAVTTDEQILDYVRSRSNTIY--HPCGTCRMGSDPGAVVDAALRVR-GVKGLRIADASIMPRITSGNINATCLMIGEKAADLI 533
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|1133688281|ref|WP_076074029.1| (choline dehydrogenase [Sphingopyxis granuli] >gi|1133385993|gb|APW71988.1| choline dehydrogenase [Sphingopyxis granuli]) HSP 1 Score: 201.83 bits (512), Expect = 1.230e-53 Identity = 196/594 (33.00%), Postives = 262/594 (44.11%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISK-QISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPEY-GKNGPVHVERGDAQTMYSY---LYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFV--LNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLALG----CANLKVHGPG-------------GQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGD----VLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIKED 602 DYV+VGAG+AG V+A RLS P RV+LLE G + +G +W+S I P +T A P + TE +P+ NR V GK LGG+++IN Y R P +D W G W E+ YFR+ ED E+ E+ G GP+HV GD + ++ L +A P G G + + G R A AYL + NL VRT A RI+F E RA GVEY GA+H + A+RE+IL G +P LL SG+G A+ L ALG+ V P VG++L V F V +N + +Y L RRG + A + + K R E I F ++P A + A+G A PG G V + + DP + HP I N A EDR LR R + ++P + SE P ++E LD S G + Y H T RMGD VLD RLRV+ GV+GLRV DAS +P +I A M+GE+AAD+I D Sbjct: 7 DYVIVGAGSAGCVLANRLSARPDDRVVLLEAGGDDRPHRNAG-----QWLSNLMIHVPAGYAQTLADPKVNWNFRTEPDPSTGNR----VYSWPRGKVLGGTSSINGMIYVRGQPQDYDHWRQLGCTGWSWEDVLPYFRRAEDQENGEDEWHGVGGPLHV--GDQRERFAVGEALLDACQQAGIPRRDDINGAEQEGATWYQQTTRNGRRCSAAVAYLHPVMT--RPNLDVRTNALALRILF-EGGRAVGVEYSAH--GAIH--------------------------RIRARREIILAGGAINSPQLLQLSGIGDASLLSALGIRPVFHSPQVGRNLQDHFGVATAFRLRPGVKSVNELTQGIRLAGQIARYALRRRGLLTFAAAAVGAFCKSRPELETPDIQF--HILPATAD-LAAMGRKRFIAMTLERQPGMTFSAYHMRPQSRGSVTIRSSDPRD--HPAIAPNYLAEAEDRSVTVQGLRWARAIASQPALRPYIESELRPGAGTETDAE-LLDYARSSGTSLY--HPVGTCRMGDDALAVLDPRLRVR-GVEGLRVADASIMPRLISGNTNAPAIMIGEKAADMILAD 549
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|522172351|ref|WP_020680900.1| (choline dehydrogenase [Marinobacterium rhizophilum]) HSP 1 Score: 201.83 bits (512), Expect = 1.309e-53 Identity = 182/581 (31.33%), Postives = 260/581 (44.75%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLNTEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPEY-GKNGPVHVERGD--AQTMYSYLYEASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNGSMVPEMNPFVLNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLAL-GCANLKVHG---------PGGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGD----VLDSRLRVQGGVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIK 600 DY+++GAG+AG V+A R+SEDPA VLLLE G S +S Q S ++T ++++R +P P LN+R + P GK LGGS++IN Y R FD W G + WG + YFRK E + EY G +GP+H G+ A +Y +A G++ G ++ V+ G R AYLR + NL V T A RII D RA+GVEY R + H T+ N REV+L AG +PHLL SG+GP L G+ V+ DLPGVG++L + F + + L + A L R+ LGA + +SE + DV P + G A +K HG P + + A P HP IQ N EEDR R C+R R+++ +P M E P ++ + E +D ++ R ++H T +MG+ V+DS+LR+ G+ GLRV+D+S P A ML ERA+DL++ Sbjct: 6 DYIIIGAGSAGCVLANRMSEDPATSVLLLESGG----SDRSVIIQMPTAFSMPMNTKKYNWRYETVP----------EPHLNDRR--VHCP--RGKVLGGSSSINGLVYIRGHACDFDEWESLGAKGWGYQSCLPYFRKAETLQLGGDEYRGDSGPLHTNNGNNMANPLYGAFVDAGEQAGYIKTRDCNGQMQEGFGPMHMTVKNGVRWSTANAYLRPAMG--RPNLTVITHAMTRRIILD-GKRASGVEY-------------------------SRAGSTH-TVHCN--REVLLSAGPIGSPHLLQLSGIGPKDVLREAGIEVLHDLPGVGENLQDHAEIYIQFKCKQPITLNSKMDLLSKALIGARWLLRKD--GLGATNHFESCGFIRSEAG---LKWPDVQFHFLPAAMRYDGNAPIKGHGFMVLTGPNKPKSRGHVRAVSPDPEVHPAIQFNYLEREEDREGFRKCVRLTREIIGQPAMDAYNDGEIAPGPQVQTDEE--IDAFV-RDNLESTYHPCGTCKMGEDEMAVVDSQLRLH-GIAGLRVIDSSVFPTETNGNLNAPTIMLAERASDLVR 528
BLAST of EWM30046.1 vs. NCBI_GenBank
Match: gi|1184557542|ref|WP_085124557.1| (choline dehydrogenase [Tistlia consotensis] >gi|1182742909|emb|SMF53792.1| choline dehydrogenase [Tistlia consotensis USBA 355]) HSP 1 Score: 201.06 bits (510), Expect = 1.820e-53 Identity = 189/589 (32.09%), Postives = 270/589 (45.84%), Query Frame = 0 Query: 40 DYVVVGAGNAGAVVAARLSEDPAVRVLLLEEGDYSQDSGKSGTSQRKEWISKQISTPRHDYRTWAMPALTEPLN---------TEANPALNNRSGLLVGPVMTGKALGGSTAINIGAYTRPAPAYFDRW---GLEHWGGEETTAYFRKLEDHEDINPEY-GKNGPVHVERGDAQTMYSYLY-EASVTMDPPLCSSSAGRLSYGLPQVYRAVQQGTRVDAYTAYLRTEAEARKDNLIVRTGARVTRIIFDESMRATGVEYIYKDPGALHFRTGVAGEDPRVGISRQREKAAHVTLQANAKREVILCAGVFFTPHLLLKSGLGPAAELEALGVPVVADLPGVGKHLMARTNVLFFFGNG---SMVPEMNPFVLNNPATTDQYDLERRGPYSLGALGIYSVVKGRKSEEDDYIMFMTDVIPEVAPRMLALGCANLKVH-GP-----GGQVLLDAFDPLEARHPRIQLNMAAAEEDRRAIRHCLRDVRDMMAEPVMANLGFSETFPTERLVDNSEKALDEWISRGYTFYSWHATSTARMGDVLDSRLRVQG-----GVKGLRVVDASAVPNMIEAGPMATLYMLGERAADLIK 600 DYV+VGAG+AG V+AARL+EDP V VLLLE G D G +S QI P A EPL +E P ++NR ++ P GK LGGS++IN AY R +DRW GL +W + YFR+ + HE EY G +GP+ V GD T S + EA + G G+ ++ + +G R A YLR A AR NL V T A+ RI+F E RA GV+Y+ D R ++R A REVIL G +PHLLL SG+GPA +L LG+ VVA+LPGVG++L + + S+ P + P+ N ++ RRGP + + ++ R E + + I + H GP G++ LD+ D +A PR N E DR+ +R +R R++ + L E P R ++E +D ++ R + ++H + T +MG DS V G G++GLRVVDAS +P++ A ML E+ +D I+ Sbjct: 7 DYVIVGAGSAGCVLAARLTEDPQVSVLLLEAG--GPDKGL---------MSWQIHMPL---------AFAEPLKGTRYNWAFESEPEPFMDNRR--IIQP--RGKVLGGSSSINGMAYVRGHARDYDRWAQSGLSNWSYADCLPYFRRAQSHEFGADEYRGDSGPLKVSAGDVTTPLSKAWIEAGRQAGYFITEDMNGYRQEGIGRMDQTSWKGERWSAAKGYLRP-AMARP-NLTVVTRAQSRRIVF-EGRRAVGVDYV---------------ADGRQQVAR-------------AGREVILSGGAIGSPHLLLLSGVGPADQLRDLGIEVVAELPGVGENLQDHLEIYVQYAATQPVSLYPLLKPW--NKLRVGAEWLFLRRGPGTSNQFEVGGFIRSRAGIEHPNLQYHFLPIAITYAGTAPAAGHGFQAHVGPMRPTSRGRLWLDSADWRQA--PRFVFNYNETENDRQEMRDAVRLTREIFRQKAFDGLRGEELAPGPRAQSDAE--IDAFV-REHGESAYHPSCTCKMGPAGDSMAVVDGEGRVHGLEGLRVVDASIMPSIPSGNLNAPTIMLAEKLSDAIR 533 The following BLAST results are available for this feature:
BLAST of EWM30046.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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