EWM24419.1, cds6254 (CDS) Nannochloropsis gaditana

Overview
NameEWM24419.1
Unique Namecds6254
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:137372..137743 +

Link to JBrowse

Properties
Property NameValue
Start range137372
Start range.
Protein idEWM24419.1
ProductPeptidase S8, subtilisin-related protein
Partialtrue
Orig transcript idgnl|cribi|Naga_103421g1.3764.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:137372..137743 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR000209Peptidase_S8/S53_dom
Homology
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|585105847|gb|EWM24419.1| (Peptidase S8, subtilisin-related protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 248.825 bits (634), Expect = 1.461e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query:    1 PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL 123
            PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL
Sbjct:    1 PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL 123          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|909147294|gb|KNE70493.1| (hypothetical protein AMAG_14617 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 65.855 bits (159), Expect = 3.100e-10
Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    6 QQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDG 83
            Q    ++ +V +LSLG T+SA +N AV+A T+ G+  VVAAG  N  A N SPAS   AITVAAT KTD R      G
Sbjct:  235 QAKAKNKTIVANLSLGGTFSAALNNAVKAATSAGVVFVVAAGGDNSGACNTSPASEPSAITVAATTKTDARASSSNYG 312          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040512117|gb|OBT51825.1| (hypothetical protein VE04_08471 [Pseudogymnoascus sp. 24MN13])

HSP 1 Score: 65.855 bits (159), Expect = 3.283e-10
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN + DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1069467927|ref|XP_018132345.1| (hypothetical protein VE01_03664 [Pseudogymnoascus verrucosus] >gi|682388822|gb|KFY69999.1| hypothetical protein V499_09549 [Pseudogymnoascus sp. VKM F-103] >gi|1040563190|gb|OBT98612.1| hypothetical protein VE01_03664 [Pseudogymnoascus verrucosus])

HSP 1 Score: 65.855 bits (159), Expect = 3.380e-10
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN + DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|682445413|gb|KFZ06449.1| (hypothetical protein V501_07403 [Pseudogymnoascus sp. VKM F-4519 (FW-2642)])

HSP 1 Score: 65.855 bits (159), Expect = 3.447e-10
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN + DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|831350021|ref|XP_012744855.1| (hypothetical protein GMDG_06417 [Pseudogymnoascus destructans 20631-21] >gi|939319658|sp|L8FSM5.1|SUB2_PSED2 RecName: Full=Subtilisin-like protease 2; AltName: Full=Destructin-1; AltName: Full=Serine protease 2; Short=PdSP2; Flags: Precursor >gi|440633958|gb|ELR03877.1| hypothetical protein GMDG_06417 [Pseudogymnoascus destructans 20631-21] >gi|1026906580|gb|OAF58782.1| hypothetical protein VC83_06062 [Pseudogymnoascus destructans])

HSP 1 Score: 65.855 bits (159), Expect = 3.447e-10
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN   DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGKDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAVDSTDTR 308          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|549051118|emb|CCX30906.1| (Similar to Alkaline protease 1; acc. no. P28296 [Pyronema omphalodes CBS 100304])

HSP 1 Score: 65.4698 bits (158), Expect = 5.287e-10
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   15 VVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDG 83
            V ++SLG  YSA++NRAV+A    GI   VAAGN+N DA + SPAS A A+TV AT KTD R      G
Sbjct:  253 VANMSLGGVYSASLNRAVDAAIQAGITFAVAAGNNNKDAKDYSPASVAAALTVGATDKTDSRASYSNFG 321          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040551001|gb|OBT86659.1| (hypothetical protein VE02_04462 [Pseudogymnoascus sp. 03VT05])

HSP 1 Score: 65.0846 bits (157), Expect = 7.097e-10
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN   DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAIDNTDAR 308          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|909141321|gb|KNE66112.1| (hypothetical protein AMAG_10366 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 65.0846 bits (157), Expect = 7.312e-10
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   12 QMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            + V  ++SLG +YSA +N AV+A T+ G+   VAAGN N DA N SPAS   AITV AT KTD R
Sbjct:  240 KTVAANMSLGGSYSAALNSAVKAATSAGVVFAVAAGNENQDACNTSPASEPSAITVGATTKTDTR 304          
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040535190|gb|OBT71767.1| (hypothetical protein VF21_09409 [Pseudogymnoascus sp. 05NY08])

HSP 1 Score: 65.0846 bits (157), Expect = 7.824e-10
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
            Q   D   V+S+SLG +YSA +N AVE+  + G+  VVAAGN   DA+N SPAS+  AITV A   TD R
Sbjct:  239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAIDNTDAR 308          
The following BLAST results are available for this feature:
BLAST of EWM24419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105847|gb|EWM24419.1|1.461e-83100.00Peptidase S8, subtilisin-related protein, partial ... [more]
gi|909147294|gb|KNE70493.1|3.100e-1050.00hypothetical protein AMAG_14617 [Allomyces macrogy... [more]
gi|1040512117|gb|OBT51825.1|3.283e-1051.43hypothetical protein VE04_08471 [Pseudogymnoascus ... [more]
gi|1069467927|ref|XP_018132345.1|3.380e-1051.43hypothetical protein VE01_03664 [Pseudogymnoascus ... [more]
gi|682445413|gb|KFZ06449.1|3.447e-1051.43hypothetical protein V501_07403 [Pseudogymnoascus ... [more]
gi|831350021|ref|XP_012744855.1|3.447e-1051.43hypothetical protein GMDG_06417 [Pseudogymnoascus ... [more]
gi|549051118|emb|CCX30906.1|5.287e-1053.62Similar to Alkaline protease 1; acc. no. P28296 [P... [more]
gi|1040551001|gb|OBT86659.1|7.097e-1051.43hypothetical protein VE02_04462 [Pseudogymnoascus ... [more]
gi|909141321|gb|KNE66112.1|7.312e-1055.38hypothetical protein AMAG_10366 [Allomyces macrogy... [more]
gi|1040535190|gb|OBT71767.1|7.824e-1051.43hypothetical protein VF21_09409 [Pseudogymnoascus ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6269rna6269Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications