EWM24419.1, cds6254 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|585105847|gb|EWM24419.1| (Peptidase S8, subtilisin-related protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 248.825 bits (634), Expect = 1.461e-83 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query: 1 PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL 123
PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL
Sbjct: 1 PPSRPQQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDGWEGGREGGKERRGGVWGWRGYERVESSFSLSPPLPTSSFL 123
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|909147294|gb|KNE70493.1| (hypothetical protein AMAG_14617 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 65.855 bits (159), Expect = 3.100e-10 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 6 QQYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDG 83
Q ++ +V +LSLG T+SA +N AV+A T+ G+ VVAAG N A N SPAS AITVAAT KTD R G
Sbjct: 235 QAKAKNKTIVANLSLGGTFSAALNNAVKAATSAGVVFVVAAGGDNSGACNTSPASEPSAITVAATTKTDARASSSNYG 312
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040512117|gb|OBT51825.1| (hypothetical protein VE04_08471 [Pseudogymnoascus sp. 24MN13]) HSP 1 Score: 65.855 bits (159), Expect = 3.283e-10 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN + DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1069467927|ref|XP_018132345.1| (hypothetical protein VE01_03664 [Pseudogymnoascus verrucosus] >gi|682388822|gb|KFY69999.1| hypothetical protein V499_09549 [Pseudogymnoascus sp. VKM F-103] >gi|1040563190|gb|OBT98612.1| hypothetical protein VE01_03664 [Pseudogymnoascus verrucosus]) HSP 1 Score: 65.855 bits (159), Expect = 3.380e-10 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN + DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|682445413|gb|KFZ06449.1| (hypothetical protein V501_07403 [Pseudogymnoascus sp. VKM F-4519 (FW-2642)]) HSP 1 Score: 65.855 bits (159), Expect = 3.447e-10 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN + DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDDADASNYSPASAKNAITVGAIDNTDTR 308
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|831350021|ref|XP_012744855.1| (hypothetical protein GMDG_06417 [Pseudogymnoascus destructans 20631-21] >gi|939319658|sp|L8FSM5.1|SUB2_PSED2 RecName: Full=Subtilisin-like protease 2; AltName: Full=Destructin-1; AltName: Full=Serine protease 2; Short=PdSP2; Flags: Precursor >gi|440633958|gb|ELR03877.1| hypothetical protein GMDG_06417 [Pseudogymnoascus destructans 20631-21] >gi|1026906580|gb|OAF58782.1| hypothetical protein VC83_06062 [Pseudogymnoascus destructans]) HSP 1 Score: 65.855 bits (159), Expect = 3.447e-10 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGKDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAVDSTDTR 308
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|549051118|emb|CCX30906.1| (Similar to Alkaline protease 1; acc. no. P28296 [Pyronema omphalodes CBS 100304]) HSP 1 Score: 65.4698 bits (158), Expect = 5.287e-10 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 15 VVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLRECECEDG 83
V ++SLG YSA++NRAV+A GI VAAGN+N DA + SPAS A A+TV AT KTD R G
Sbjct: 253 VANMSLGGVYSASLNRAVDAAIQAGITFAVAAGNNNKDAKDYSPASVAAALTVGATDKTDSRASYSNFG 321
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040551001|gb|OBT86659.1| (hypothetical protein VE02_04462 [Pseudogymnoascus sp. 03VT05]) HSP 1 Score: 65.0846 bits (157), Expect = 7.097e-10 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAIDNTDAR 308
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|909141321|gb|KNE66112.1| (hypothetical protein AMAG_10366 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 65.0846 bits (157), Expect = 7.312e-10 Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
Query: 12 QMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
+ V ++SLG +YSA +N AV+A T+ G+ VAAGN N DA N SPAS AITV AT KTD R
Sbjct: 240 KTVAANMSLGGSYSAALNSAVKAATSAGVVFAVAAGNENQDACNTSPASEPSAITVGATTKTDTR 304
BLAST of EWM24419.1 vs. NCBI_GenBank
Match: gi|1040535190|gb|OBT71767.1| (hypothetical protein VF21_09409 [Pseudogymnoascus sp. 05NY08]) HSP 1 Score: 65.0846 bits (157), Expect = 7.824e-10 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 7 QYNPDQMVVVSLSLGATYSATVNRAVEALTAQGIPCVVAAGNSNVDAANASPASSAGAITVAATGKTDLR 76
Q D V+S+SLG +YSA +N AVE+ + G+ VVAAGN DA+N SPAS+ AITV A TD R
Sbjct: 239 QNGGDGKSVLSMSLGGSYSAALNSAVESTISNGVTVVVAAGNDGADASNYSPASAKNAITVGAIDNTDAR 308 The following BLAST results are available for this feature:
BLAST of EWM24419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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