EWM24420.1, cds6253 (CDS) Nannochloropsis gaditana

Overview
NameEWM24420.1
Unique Namecds6253
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:135752..135786 +
Alignment locationCM002468.1:136002..136618 +
Alignment locationCM002468.1:136940..136989 +
Alignment locationCM002468.1:137033..137164 +

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Properties
Property NameValue
Protein idEWM24420.1
ProductPeptidase S8
Orig transcript idgnl|cribi|Naga_100397g1.9993.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:135752..135786 +
CM002468.1supercontigCM002468.1:136002..136618 +
CM002468.1supercontigCM002468.1:136940..136989 +
CM002468.1supercontigCM002468.1:137033..137164 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR023827Peptidase_S8_Asp-AS
Homology
[Close]
BLAST of EWM24420.1 vs. NCBI_GenBank
Match: gi|585105849|gb|EWM24420.1| (Peptidase S8 [Nannochloropsis gaditana])

HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 
Query:    1 MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQNRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPPPAPETAPNPNIYNWGNDRSNQMRGLDMNRQQCKSRGTDVNIFVLDTGCLTSHDEIRGRATTESTGMVTAPTARARRLGRMWVSPPTRRSAVLRCWRTPGPVSCSTS 277
            MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQNRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPPPAPETAPNPNIYNWGNDRSNQMRGLDMNRQQCKSRGTDVNIFVLDTGCLTSHDEIRGRATTESTGMVTAPTARARRLGRMWVSPPTRRSAVLRCWRTPGPVSCSTS
Sbjct:    1 MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQNRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPPPAPETAPNPNIYNWGNDRSNQMRGLDMNRQQCKSRGTDVNIFVLDTGCLTSHDEIRGRATTESTGMVTAPTARARRLGRMWVSPPTRRSAVLRCWRTPGPVSCSTS 277
[Close]
BLAST of EWM24420.1 vs. NCBI_GenBank
Match: gi|553178329|ref|XP_005852541.1| (hypothetical protein NGA_0706600, partial [Nannochloropsis gaditana CCMP526] >gi|422295993|gb|EKU23292.1| hypothetical protein NGA_0706600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 338.191 bits (866), Expect = 5.583e-113
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0 
Query:    1 MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQ--NRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPP 171
            MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQ  NRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPP
Sbjct:  148 MLMTLRKTNCAKDPSCRATVENQLTKMGCEAFTYYPAIQAMGAVCYAPAVSPLEAKKLTLQSLLGIRAATTYFSSATLDMKVQVDPGRDNDPTWINAGWQRGSWWRQNRNRNRNRNRNRNRNRNRNRPPLFARPPPAPAPVPPPPPPPPPPPPASPPAPSPGNNVQPSPPNPP 320
The following BLAST results are available for this feature:
BLAST of EWM24420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105849|gb|EWM24420.1|0.000e+0100.00Peptidase S8 [Nannochloropsis gaditana][more]
gi|553178329|ref|XP_005852541.1|5.583e-11398.84hypothetical protein NGA_0706600, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6268rna6268Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications