EWM24433.1, cds6240 (CDS) Nannochloropsis gaditana

Overview
NameEWM24433.1
Unique Namecds6240
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:107048..107183 +
Alignment locationCM002468.1:107333..107552 +
Alignment locationCM002468.1:107911..107950 +
Alignment locationCM002468.1:108075..108149 +

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Properties
Property NameValue
Protein idEWM24433.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101474g1.4587.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:107048..107183 +
CM002468.1supercontigCM002468.1:107333..107552 +
CM002468.1supercontigCM002468.1:107911..107950 +
CM002468.1supercontigCM002468.1:108075..108149 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM24433.1 vs. NCBI_GenBank
Match: gi|585105871|gb|EWM24433.1| (hypothetical protein Naga_101474g1 [Nannochloropsis gaditana])

HSP 1 Score: 316.235 bits (809), Expect = 4.024e-109
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MPRGTLKSNSYSSSTGRQPLLPQASTLDGPAPGKNGGGAGENTPYGGRPNVIPPATWEEREKRKTEAEGTRRTGTGHHRAMRKLPLVGLGVFDLLFLAATVLGVYQGHLKDFWADHYTNYSFEHALLDAMGVPAATTGQTGRAGGKAASIRRGGRR 156
            MPRGTLKSNSYSSSTGRQPLLPQASTLDGPAPGKNGGGAGENTPYGGRPNVIPPATWEEREKRKTEAEGTRRTGTGHHRAMRKLPLVGLGVFDLLFLAATVLGVYQGHLKDFWADHYTNYSFEHALLDAMGVPAATTGQTGRAGGKAASIRRGGRR
Sbjct:    1 MPRGTLKSNSYSSSTGRQPLLPQASTLDGPAPGKNGGGAGENTPYGGRPNVIPPATWEEREKRKTEAEGTRRTGTGHHRAMRKLPLVGLGVFDLLFLAATVLGVYQGHLKDFWADHYTNYSFEHALLDAMGVPAATTGQTGRAGGKAASIRRGGRR 156
The following BLAST results are available for this feature:
BLAST of EWM24433.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105871|gb|EWM24433.1|4.024e-109100.00hypothetical protein Naga_101474g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6255rna6255Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications