EWM24448.1, cds6225 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|585105902|gb|EWM24448.1| (mitochondrion protein [Nannochloropsis gaditana]) HSP 1 Score: 443.351 bits (1139), Expect = 2.343e-157 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 1 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAVVIPFPIPFLLGRLQMARLLGKMHTLPSGFSLLLLPCLIFLLTLRTPPSTPKALKLLPPPALPPSLPAPQEGLSRNVKHRLLQHLRNRERATFQNRDT 223 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAVVIPFPIPFLLGRLQMARLLGKMHTLPSGFSLLLLPCLIFLLTLRTPPSTPKALKLLPPPALPPSLPAPQEGLSRNVKHRLLQHLRNRERATFQNRDT Sbjct: 1 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAVVIPFPIPFLLGRLQMARLLGKMHTLPSGFSLLLLPCLIFLLTLRTPPSTPKALKLLPPPALPPSLPAPQEGLSRNVKHRLLQHLRNRERATFQNRDT 223
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|585105901|gb|EWM24447.1| (mitochondrion protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 257.684 bits (657), Expect = 3.026e-84 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 Query: 1 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV Sbjct: 1 MYAQDQDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 HSP 2 Score: 63.929 bits (154), Expect = 4.768e-9 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 192 PAPQEGLSRNVKHRLLQHLRNRERATFQNRDT 223 P EGLSRNVKHRLLQHLRNRERATFQNRDT Sbjct: 123 PVAVEGLSRNVKHRLLQHLRNRERATFQNRDT 154
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|695374400|ref|XP_009515287.1| (hypothetical protein PHYSODRAFT_468262 [Phytophthora sojae] >gi|348688198|gb|EGZ28012.1| hypothetical protein PHYSODRAFT_468262 [Phytophthora sojae]) HSP 1 Score: 144.821 bits (364), Expect = 1.748e-37 Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 0 Query: 6 QDLRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 ++L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P +FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 196 KNLKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLGAEQAQNPEEFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 316
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|301089291|ref|XP_002894959.1| (ubiquitin-activating enzyme (E1), putative [Phytophthora infestans T30-4] >gi|262104477|gb|EEY62529.1| ubiquitin-activating enzyme (E1), putative [Phytophthora infestans T30-4]) HSP 1 Score: 144.436 bits (363), Expect = 2.062e-37 Identity = 69/119 (57.98%), Postives = 90/119 (75.63%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P +FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 196 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPKEFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKISPEAV 314
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|970653171|gb|KUF91692.1| (Vacuolar-sorting protein SNF7 [Phytophthora nicotianae]) HSP 1 Score: 143.28 bits (360), Expect = 3.904e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 182 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 300
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|570942077|gb|ETP07334.1| (hypothetical protein F441_16376 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 143.665 bits (361), Expect = 4.351e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 195 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 313
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|675202063|ref|XP_008909916.1| (hypothetical protein PPTG_14396 [Phytophthora parasitica INRA-310] >gi|568089682|gb|ETN04522.1| hypothetical protein PPTG_14396 [Phytophthora parasitica INRA-310] >gi|570321010|gb|ETO68958.1| hypothetical protein F444_14332 [Phytophthora parasitica P1976]) HSP 1 Score: 143.665 bits (361), Expect = 4.537e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 195 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 313
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|568012863|gb|ETL87040.1| (hypothetical protein L917_13659 [Phytophthora parasitica] >gi|570976304|gb|ETP38142.1| hypothetical protein F442_14172 [Phytophthora parasitica P10297]) HSP 1 Score: 143.665 bits (361), Expect = 4.682e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 195 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 313
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|567954702|gb|ETK80335.1| (hypothetical protein L915_13965 [Phytophthora parasitica]) HSP 1 Score: 143.28 bits (360), Expect = 5.090e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 195 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 313
BLAST of EWM24448.1 vs. NCBI_GenBank
Match: gi|970663934|gb|KUG00981.1| (hypothetical protein AM587_10006104 [Phytophthora nicotianae]) HSP 1 Score: 143.28 bits (360), Expect = 5.144e-37 Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0 Query: 8 LRVISALGAGLKADPTRLCIGELDNTKNEPLAIKLRYLLRKQGRACTGITTVYSHEKPRGSLLPLTDEQEAAPSDFGILEHMRLRVLPVLGTMPALFGQAMAAFVLCELAGQSLQPVAV 126 L+VI+A GAG KADPTRL IG L + +PLA K+RY L+K+G + + ITT++S EK LLPL EQ P FG +E+ R+RV+PVLGTMPALFGQ+MAA+VLC+LAG+ + P AV Sbjct: 195 LKVITATGAGAKADPTRLQIGSLKDAVRDPLATKIRYFLKKKGISSSEITTIFSSEKSVCKLLPLDAEQAQNPEQFGNVENFRIRVIPVLGTMPALFGQSMAAYVLCDLAGKKINPEAV 313 The following BLAST results are available for this feature:
BLAST of EWM24448.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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