EWM24450.1, cds6222 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|585105905|gb|EWM24450.1| (adenylate kinase isoenzyme 6 [Nannochloropsis gaditana]) HSP 1 Score: 412.149 bits (1058), Expect = 1.169e-145 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 1 MDGTRPHRTNPLLRASLKRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIAGIESKRRRAWKNDRYFKLRC 201 MDGTRPHRTNPLLRASLKRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIAGIESKRRRAWKNDRYFKLRC Sbjct: 1 MDGTRPHRTNPLLRASLKRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIAGIESKRRRAWKNDRYFKLRC 201
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|553193436|ref|XP_005855774.1| (transcription initiation factor TFIID subunit 9 / adenylate kinase, partial [Nannochloropsis gaditana CCMP526] >gi|422293278|gb|EKU20578.1| transcription initiation factor TFIID subunit 9 / adenylate kinase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 325.094 bits (832), Expect = 1.688e-111 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 Query: 20 PNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL 179 PNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL Sbjct: 1 PNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL 160
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|1072230900|gb|OEU15633.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 210.305 bits (534), Expect = 4.444e-66 Identity = 105/175 (60.00%), Postives = 133/175 (76.00%), Query Frame = 0 Query: 19 RPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIIL----ADG-GKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIAGIESKRR 188 RP +LITGTPGTGKT+TA IA TG++HV+VGD+ KE +C EGRD +LDTNILDE+KLLD +E+IL DG G V D+H CE+FPERWFDLI+ +R + VLFDRL+ARGY+ +KR EN+E EIMQV+LDEA ESY +EIVHE S T +D++ N RV+ W I+ K + Sbjct: 10 RPFVLITGTPGTGKTSTASLIAERTGMKHVNVGDLIKEHKCHEGRDEDLDTNILDEDKLLDAMEVILDKAAEDGQGIVADFHVCEIFPERWFDLIICLRTSTDVLFDRLTARGYNEKKRSENMEAEIMQVILDEARESYAQEIVHECPSNTVEDMETNVTRVEQWGKQWIKDKDK 184
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|219122202|ref|XP_002181440.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407426|gb|EEC47363.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 208.379 bits (529), Expect = 1.547e-65 Identity = 102/166 (61.45%), Postives = 128/166 (77.11%), Query Frame = 0 Query: 18 KRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADG-----GKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDW 178 KRPN+LITGTPGTGKT TA +A G++HVS GD+AKE + +EGRD ELDTNILDE+KL+D LE IL + G VVD+H CE+FPERWFDL+LV+RA VLFDRL+ R YS +KR EN+E EIMQV+LDEA ESY+ IVHE+ S T ++++ N +RV+ W Sbjct: 3 KRPNVLITGTPGTGKTATASLLAERLGMKHVSPGDLAKEHKLYEGRDEELDTNILDEDKLIDLLENILEEAEQEGVGVVVDFHVCEIFPERWFDLVLVLRARTEVLFDRLTTRAYSEKKRAENMESEIMQVILDEARESYDPLIVHEVPSNTLEEMESNIERVRLW 168
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|299471763|emb|CBN76984.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 207.223 bits (526), Expect = 4.984e-65 Identity = 98/162 (60.49%), Postives = 122/162 (75.31%), Query Frame = 0 Query: 20 PNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIA 181 PN+LITGTPGTGKT T++ IA TGL H++VGDV + K+C EGRD DT ILDE+KL D +E + +GG V+D+HSC+ FPE WFDLILV+RA + LFDRL ARGYS +K EN+ECEIMQVVL+EA E Y +E VHE+ S T ++L+ N RV WL A Sbjct: 7 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDESFDTFILDEDKLCDAMETQMEEGGNVIDFHSCDFFPEHWFDLILVLRAETSTLFDRLKARGYSEKKVGENVECEIMQVVLEEAKEGYPEEAVHEVPSNTIEELESNVSRVAQWLDA 168
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|1191056655|ref|XP_020906412.1| (adenylate kinase isoenzyme 6-like [Exaiptasia pallida] >gi|999971727|gb|KXJ10901.1| Adenylate kinase isoenzyme 6 [Exaiptasia pallida]) HSP 1 Score: 203.371 bits (516), Expect = 1.593e-63 Identity = 88/168 (52.38%), Postives = 128/168 (76.19%), Query Frame = 0 Query: 12 LLRASLKRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL 179 + AS RPNIL+TGTPGTGK+ T ++ TGL ++++G++AKE + FEG D EL+ ++LDE+K++D +E I++DGG +VDYH CE FPERWFD++ V+R N VL+DRL RGY+ +K N+ECEI Q +L+EA ESY+KEIVHE+ S T +DL+ N ++++ W+ Sbjct: 1 MASASRSRPNILLTGTPGTGKSVTGIELSQRTGLNYINIGEIAKENDLFEGWDDELECHVLDEDKVIDEMEDIMSDGGNIVDYHGCEFFPERWFDIVFVLRTDNTVLYDRLQQRGYTEKKLTNNVECEIFQTILEEAKESYKKEIVHELPSNTSEDLERNLEQIEQWV 168
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|223997586|ref|XP_002288466.1| (hypothetical protein THAPSDRAFT_32766 [Thalassiosira pseudonana CCMP1335] >gi|220975574|gb|EED93902.1| hypothetical protein THAPSDRAFT_32766 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 203.756 bits (517), Expect = 1.676e-63 Identity = 98/166 (59.04%), Postives = 125/166 (75.30%), Query Frame = 0 Query: 18 KRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADG-----GKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDW 178 KRPNIL+TGTPG GKT TA +A TGL H++VG++ KE +C++G D LDT+ILDE+KLLD +E I + G V DYHSCELFPERWFDLI+V+RA VL+DRL+ RGY+ +KR EN+E EIMQVVLDEA E+Y+ EIV E+ S T +D++ N +R K W Sbjct: 10 KRPNILVTGTPGVGKTVTAALLAEKTGLRHINVGELIKEHKCYDGHDDTLDTHILDEDKLLDLMEAIFQECEDENVGIVADYHSCELFPERWFDLIMVLRANTEVLYDRLTERGYNEKKRSENVEAEIMQVVLDEAKEAYDVEIVQEVQSNTVEDMESNVERCKAW 175
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|397612891|gb|EJK61934.1| (hypothetical protein THAOC_17484 [Thalassiosira oceanica]) HSP 1 Score: 202.601 bits (514), Expect = 3.565e-63 Identity = 102/167 (61.08%), Postives = 124/167 (74.25%), Query Frame = 0 Query: 18 KRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILA-----DGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL 179 KRPNILITGTPG GKT TA IA G HV+VGD+ K+ +C++GRD +LDT+ILDE+KLLD +E + + G V DYHS ELFPERWFDLILV+RA VLFDRLS RGY +KR+ENLE EIMQV LDEA ESY+KEIV E+ S T ++++ N R K W+ Sbjct: 7 KRPNILITGTPGVGKTATASLIAEQIGFRHVNVGDLIKQHKCYDGRDEDLDTHILDEDKLLDLMESMFQECADENKGIVADYHSSELFPERWFDLILVLRARTEVLFDRLSQRGYGEKKRDENLEAEIMQVCLDEAKESYDKEIVVEVHSNTIEEMESNVDRCKIWV 173
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|1183422110|gb|ORY46443.1| (P-loop containing nucleoside triphosphate hydrolase protein [Rhizoclosmatium globosum]) HSP 1 Score: 193.356 bits (490), Expect = 2.254e-59 Identity = 89/180 (49.44%), Postives = 129/180 (71.67%), Query Frame = 0 Query: 1 MDGTRPHRTNPLLRASLKRPNILITGTPGTGKTTTARYIAGAT-GLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWL 179 MD + + P +R PNILITGTPGTGKT T+ +A A G+ H+ VG + KEK +G D E ++ +++E+K++D +E ++ +GGKVVD+H CE FPERWFDL++V+RA N++L+ RL RGY+T+K EN+ECEIM VV EA ESY+ I+ E+ SET +D++EN QR++ W+ Sbjct: 1 MDSDSDNESAPEMRQR-SFPNILITGTPGTGKTVTSSMVAQAVPGMTHIEVGKLVKEKALHDGYDAEFNSYLINEDKVVDEMEEMMQEGGKVVDHHGCEFFPERWFDLVVVLRANNSILYPRLEGRGYNTKKITENIECEIMDVVKIEAFESYDSSIIVELKSETIEDMEENVQRIETWI 179
BLAST of EWM24450.1 vs. NCBI_GenBank
Match: gi|1046803723|gb|OCL09654.1| (P-loop containing nucleoside triphosphate hydrolase protein [Glonium stellatum]) HSP 1 Score: 191.815 bits (486), Expect = 5.879e-59 Identity = 88/169 (52.07%), Postives = 129/169 (76.33%), Query Frame = 0 Query: 19 RPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQVVLDEALESYEKEIVHEITSETEDDLQENAQRVKDWLIAGIESKR 187 PNI+ITGTPG GKTT A +A L+H+ + +AKE++C+EG D EL T I+DE+KLLD LE ++A GG ++D+H+C+LFP+RW DL++V+R + LFDRL+ARGYS +K +EN++ EIMQV+L+EA E Y++EIV E+ SE +D+++N +R++ W+ A ESK Sbjct: 4 NPNIVITGTPGVGKTTHAELLARNMALKHLPINQIAKEQDCYEGWDDELQTWIVDEDKLLDALEPLVASGGCILDWHACDLFPQRWVDLVVVIRCDSTTLFDRLTARGYSGKKLDENMDAEIMQVLLEEAKEGYDEEIVVELHSEVAEDVEQNVERIEKWIEAWKESKN 172 The following BLAST results are available for this feature:
BLAST of EWM24450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|