EWM24456.1, cds6217 (CDS) Nannochloropsis gaditana

Overview
NameEWM24456.1
Unique Namecds6217
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:33688..34086 +

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Properties
Property NameValue
Start range33688
Start range.
Protein idEWM24456.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101327g3.10296.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:33688..34086 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24456.1 vs. NCBI_GenBank
Match: gi|585105919|gb|EWM24456.1| (hypothetical protein Naga_101327g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 235.343 bits (599), Expect = 5.694e-78
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 PPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSHPRPSPSRSRPRLWLLHGRAARLLPRREEPLSSSRGEPDGFAHVRRAASASFQVQRRLCGPAERIGFGRAEGGNCLRLDTATKADARVVNSGA 132
            PPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSHPRPSPSRSRPRLWLLHGRAARLLPRREEPLSSSRGEPDGFAHVRRAASASFQVQRRLCGPAERIGFGRAEGGNCLRLDTATKADARVVNSGA
Sbjct:    1 PPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSHPRPSPSRSRPRLWLLHGRAARLLPRREEPLSSSRGEPDGFAHVRRAASASFQVQRRLCGPAERIGFGRAEGGNCLRLDTATKADARVVNSGA 132
The following BLAST results are available for this feature:
BLAST of EWM24456.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105919|gb|EWM24456.1|5.694e-78100.00hypothetical protein Naga_101327g3, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6232rna6232Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications