EWM24458.1, cds6216 (CDS) Nannochloropsis gaditana

Overview
NameEWM24458.1
Unique Namecds6216
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:32276..32776 +
Alignment locationCM002468.1:32893..33087 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24458.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100512g3.9605.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:32276..32776 +
CM002468.1supercontigCM002468.1:32893..33087 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24458.1 vs. NCBI_GenBank
Match: gi|585105922|gb|EWM24458.1| (hypothetical protein Naga_100512g3 [Nannochloropsis gaditana])

HSP 1 Score: 472.241 bits (1214), Expect = 1.717e-168
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 MKRRRASTFLLALPRALFLSLLSLPYSAHAGFFRHDPPPAPGECTYVENIYIEDAVNALAKCVEVSPDGIRNALQKQTDKDGEYILGELYLKNLNECLEKVKKDGGSYNLDDKCNKYVEDFQATGDSSNGKEAGGIVAKKMMYNTDKFCYCMATIDPSEIFCYGLGVAPAIKSIRDTCDLLDYKYVQKVLTKPPKPVPPPPPPPPPPRPGPNSSTSHRPSFFTLPSITVPD 231
            MKRRRASTFLLALPRALFLSLLSLPYSAHAGFFRHDPPPAPGECTYVENIYIEDAVNALAKCVEVSPDGIRNALQKQTDKDGEYILGELYLKNLNECLEKVKKDGGSYNLDDKCNKYVEDFQATGDSSNGKEAGGIVAKKMMYNTDKFCYCMATIDPSEIFCYGLGVAPAIKSIRDTCDLLDYKYVQKVLTKPPKPVPPPPPPPPPPRPGPNSSTSHRPSFFTLPSITVPD
Sbjct:    1 MKRRRASTFLLALPRALFLSLLSLPYSAHAGFFRHDPPPAPGECTYVENIYIEDAVNALAKCVEVSPDGIRNALQKQTDKDGEYILGELYLKNLNECLEKVKKDGGSYNLDDKCNKYVEDFQATGDSSNGKEAGGIVAKKMMYNTDKFCYCMATIDPSEIFCYGLGVAPAIKSIRDTCDLLDYKYVQKVLTKPPKPVPPPPPPPPPPRPGPNSSTSHRPSFFTLPSITVPD 231
The following BLAST results are available for this feature:
BLAST of EWM24458.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105922|gb|EWM24458.1|1.717e-168100.00hypothetical protein Naga_100512g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6231rna6231Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications