EWM24469.1, cds6205 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24469.1 vs. NCBI_GenBank
Match: gi|585105937|gb|EWM24469.1| (Protein of unknown function DUF543 [Nannochloropsis gaditana]) HSP 1 Score: 197.978 bits (502), Expect = 3.218e-64 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query: 1 MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARKSGLMEREGGERGTRMHGRSEDRLWSLIPCGMAASRPRETDIDRRG 98
MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARKSGLMEREGGERGTRMHGRSEDRLWSLIPCGMAASRPRETDIDRRG
Sbjct: 1 MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARKSGLMEREGGERGTRMHGRSEDRLWSLIPCGMAASRPRETDIDRRG 98
BLAST of EWM24469.1 vs. NCBI_GenBank
Match: gi|553184800|ref|XP_005854147.1| (hypothetical protein NGA_0198301 [Nannochloropsis gaditana CCMP526] >gi|553185547|ref|XP_005854265.1| hypothetical protein NGA_0198302 [Nannochloropsis gaditana CCMP526] >gi|422294793|gb|EKU22093.1| hypothetical protein NGA_0198302 [Nannochloropsis gaditana CCMP526] >gi|422294909|gb|EKU22209.1| hypothetical protein NGA_0198301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.531 bits (262), Expect = 7.555e-28 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query: 1 MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLAR 52
MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLAR
Sbjct: 1 MKDSSVPAPVMAGKVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLAR 52
BLAST of EWM24469.1 vs. NCBI_GenBank
Match: gi|298710499|emb|CBJ25563.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 53.9138 bits (128), Expect = 1.370e-7 Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query: 14 KVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARKSGL 56
VPSE ISEKWD CLERTV+N +G V L+G VL R G+
Sbjct: 8 NVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGM 50 The following BLAST results are available for this feature:
BLAST of EWM24469.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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