EWM24481.1, cds6193 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24481.1 vs. NCBI_GenBank
Match: gi|585105954|gb|EWM24481.1| (Protein of unknown function DUF1997 [Nannochloropsis gaditana]) HSP 1 Score: 301.212 bits (770), Expect = 1.521e-103 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query: 1 MAPIQFFTASIVPVVDVRLTVDAVAGTAVIRAISGQVKHSTKPLDLKEAQEAGYVHTGPGRFDELSFQMDTTNIVSWQKVDDRTVALTSRIEMEISMEKPGWMLVPSSMMNRVGSMVLHRILKKTLPEFLDRIKNGYTGWEGEMVV 146
MAPIQFFTASIVPVVDVRLTVDAVAGTAVIRAISGQVKHSTKPLDLKEAQEAGYVHTGPGRFDELSFQMDTTNIVSWQKVDDRTVALTSRIEMEISMEKPGWMLVPSSMMNRVGSMVLHRILKKTLPEFLDRIKNGYTGWEGEMVV
Sbjct: 1 MAPIQFFTASIVPVVDVRLTVDAVAGTAVIRAISGQVKHSTKPLDLKEAQEAGYVHTGPGRFDELSFQMDTTNIVSWQKVDDRTVALTSRIEMEISMEKPGWMLVPSSMMNRVGSMVLHRILKKTLPEFLDRIKNGYTGWEGEMVV 146
BLAST of EWM24481.1 vs. NCBI_GenBank
Match: gi|552815598|ref|XP_005844487.1| (hypothetical protein CHLNCDRAFT_138831 [Chlorella variabilis] >gi|307104130|gb|EFN52385.1| hypothetical protein CHLNCDRAFT_138831 [Chlorella variabilis]) HSP 1 Score: 61.2326 bits (147), Expect = 1.473e-8 Identity = 36/137 (26.28%), Postives = 63/137 (45.99%), Query Frame = 0
Query: 4 IQFFTASIVPVVDVRLTVDAVAGTAVIRAISGQVKHSTKPLDLKEAQEAGYVHTGPGRFDELSFQMDTTNIVSWQKVDDRTVALTSRIEMEISMEKPGWMLVPSSMMNRVGSMVLHRILKKTLPEFLDRIKNGYTGW 140
++ F+ + PV+ V +TV T +R +S ++K S V RFD TN+V WQ+ L S +++ ++ P W ++P+S + R G V+ R+L+ +P FL ++ Y W
Sbjct: 81 LKLFSLEVEPVITVSVTVQERGPT--VRLLSTKLKGSKA------------VEAANERFD-----ATMTNVVRWQEAPGGGKQLASDTFIQVQLQVPAWFVLPTSTIERTGGAVMARVLESAVPRFLQQLSADYAAW 198 The following BLAST results are available for this feature:
BLAST of EWM24481.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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