EWM24480.1, cds6192 (CDS) Nannochloropsis gaditana

Overview
NameEWM24480.1
Unique Namecds6192
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:842197..842661 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24480.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100633g2.3606.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:842197..842661 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24480.1 vs. NCBI_GenBank
Match: gi|585105953|gb|EWM24480.1| (hypothetical protein Naga_100633g2 [Nannochloropsis gaditana])

HSP 1 Score: 315.849 bits (808), Expect = 3.614e-109
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 
Query:    1 MFPGDDGDWNCARIQSKQRHVPFVFISCFFSRLRGTIVGGDRRIRSHGVVKVLGKPIDAWPGRVVVRHELQNKSCIYHPRPVDYFPNTLLLRDQDVPSQDIAWHLPTSALPLLGNFKMAVATHQHFHVRLKLPRLLHDVVILRRSLKFGPNCPK 154
            MFPGDDGDWNCARIQSKQRHVPFVFISCFFSRLRGTIVGGDRRIRSHGVVKVLGKPIDAWPGRVVVRHELQNKSCIYHPRPVDYFPNTLLLRDQDVPSQDIAWHLPTSALPLLGNFKMAVATHQHFHVRLKLPRLLHDVVILRRSLKFGPNCPK
Sbjct:    1 MFPGDDGDWNCARIQSKQRHVPFVFISCFFSRLRGTIVGGDRRIRSHGVVKVLGKPIDAWPGRVVVRHELQNKSCIYHPRPVDYFPNTLLLRDQDVPSQDIAWHLPTSALPLLGNFKMAVATHQHFHVRLKLPRLLHDVVILRRSLKFGPNCPK 154
The following BLAST results are available for this feature:
BLAST of EWM24480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105953|gb|EWM24480.1|3.614e-109100.00hypothetical protein Naga_100633g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6207rna6207Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications