EWM24508.1, cds6164 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|585106007|gb|EWM24508.1| (hypothetical protein Naga_100954g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 416.772 bits (1070), Expect = 5.235e-147 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MGKSSEKYKKRSRSDAEVEEGSGTSGDDTSSSRHSDERKRRKHKHKTSSRTHKSSSGSRRKHKKRRERSPSPDASVASSHRDRKKASKQKKDGSRKKEDAGGQNGGANWSRLAESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA 215
MGKSSEKYKKRSRSDAEVEEGSGTSGDDTSSSRHSDERKRRKHKHKTSSRTHKSSSGSRRKHKKRRERSPSPDASVASSHRDRKKASKQKKDGSRKKEDAGGQNGGANWSRLAESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA
Sbjct: 1 MGKSSEKYKKRSRSDAEVEEGSGTSGDDTSSSRHSDERKRRKHKHKTSSRTHKSSSGSRRKHKKRRERSPSPDASVASSHRDRKKASKQKKDGSRKKEDAGGQNGGANWSRLAESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA 215
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|1210520126|dbj|GAX21009.1| (hypothetical protein FisN_1Lu323 [Fistulifera solaris]) HSP 1 Score: 84.3445 bits (207), Expect = 2.444e-15 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 0
Query: 114 ESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA 215
E+ EER AR+A K A I+ FGYT +NPF D NLH++F W+ KE Q G ++V +KK E EIEKVR+RR ER+ ++EEMER+RA
Sbjct: 106 ETLEERNARRAEKRAALISQKFGYTVDNNPFNDPNLHEKFTWRKKETQN--------GSEQVPKKKD-------ETFLEIEKVRQRRTERDLQREEMERIRA 192
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|1210530499|dbj|GAX10884.1| (hypothetical protein FisN_UnNu012 [Fistulifera solaris]) HSP 1 Score: 77.7962 bits (190), Expect = 4.775e-13 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 114 ESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA 215
E+ EER AR+A K A I+ FGYT +NPF D NLH++F W+ KE S++ + ++ + EIEKVR+RR ER+ ++EEMER+RA
Sbjct: 112 ETLEERNARRAEKRAALISQKFGYTVDNNPFNDPNLHEKFTWRKKEAHNDSEQAPK---------------KKDDTFFEIEKVRQRRTERDLQREEMERIRA 198
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|397614358|gb|EJK62750.1| (hypothetical protein THAOC_16625 [Thalassiosira oceanica]) HSP 1 Score: 72.7886 bits (177), Expect = 2.464e-11 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0
Query: 135 FGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKEQEEMERLRA 215
FGYT+ NPFGDANLH F WK K + A+K G E + ++ +++ EIEKVR+RRE RE EEMER+RA
Sbjct: 166 FGYTAEDNPFGDANLHDTFTWKKKNEMVAAKAKGSEAASDTKGRR----DQQDHTFAEIEKVRQRREAREAHFEEMERIRA 242
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|298706461|emb|CBJ29448.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.0922 bits (170), Expect = 1.814e-10 Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0
Query: 111 RLAESAEERAARKAAKEAKKIASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLEL----IREIEKVRKRREEREKEQEEMERLRA 215
R AES E+A RK + A+ FGYT+ NPFGD+NL +QFVW K++++ + +K +++ + R ++ I EIEKVRKRR++ E E+EEM+RL+A
Sbjct: 101 RAAESEHEKAERKRKAKMDGTAAHFGYTNDINPFGDSNLTEQFVWGKKKEKEGT-----------ADKLLTKRDMR-DMQKKNIDEIEKVRKRRDDAEAEREEMDRLKA 197
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|302795544|ref|XP_002979535.1| (hypothetical protein SELMODRAFT_177683 [Selaginella moellendorffii] >gi|300152783|gb|EFJ19424.1| hypothetical protein SELMODRAFT_177683 [Selaginella moellendorffii]) HSP 1 Score: 67.3958 bits (163), Expect = 1.362e-9 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 0
Query: 112 LAESAEERAARKAAKEAKKI--ASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKE----QEEMERL 213
L E ++A RKAA+ AKK+ ++ GY++ SNPFGD+NL ++FVW+ K ++ + K V +K+ + ER +REIEKV+KRREER E +EEM L
Sbjct: 100 LNEYLVKKAQRKAARVAKKLKTQTVSGYSNDSNPFGDSNLTEKFVWRKKIERDVANKKMDLKDLSVKAEKLRQKER----MREIEKVKKRREERAIEKAQHEEEMAML 203
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|302791956|ref|XP_002977744.1| (hypothetical protein SELMODRAFT_107633 [Selaginella moellendorffii] >gi|300154447|gb|EFJ21082.1| hypothetical protein SELMODRAFT_107633 [Selaginella moellendorffii]) HSP 1 Score: 67.3958 bits (163), Expect = 1.388e-9 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 0
Query: 112 LAESAEERAARKAAKEAKKI--ASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKE----QEEMERL 213
L E ++A RKAA+ AKK+ ++ GY++ SNPFGD+NL ++FVW+ K ++ + K V +K+ + ER +REIEKV+KRREER E +EEM L
Sbjct: 100 LNEYLVKKAQRKAARVAKKLKTQTVSGYSNDSNPFGDSNLTEKFVWRKKIERDVANKKMDLKDLSVKAEKLRQKER----MREIEKVKKRREERAIEKAQHEEEMAML 203
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|920682472|gb|KOM29244.1| (hypothetical protein LR48_Vigan641s003200 [Vigna angularis]) HSP 1 Score: 67.3958 bits (163), Expect = 1.461e-9 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 112 LAESAEERAARKAAKEAKKI--ASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKE----QEEMERL 213
+A+ +RA KA K AKK+ +++ GY++ SNPFGD+NL+++FVW+ K ++ S+ + EKK R++E + EIEKV+KRREER E +EEM L
Sbjct: 98 IAQYMTKRAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKK-----RQIERMAEIEKVKKRREERALEKARHEEEMALL 200
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|950953541|ref|XP_014496201.1| (PREDICTED: cactin-like isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 67.3958 bits (163), Expect = 1.755e-9 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 112 LAESAEERAARKAAKEAKKI--ASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKE----QEEMERL 213
+A+ +RA KA K AKK+ +++ GY++ SNPFGD+NL+++FVW+ K ++ S+ + EKK R++E + EIEKV+KRREER E +EEM L
Sbjct: 61 IAQYMTKRAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKK-----RQIERMAEIEKVKKRREERALEKARHEEEMALL 163
BLAST of EWM24508.1 vs. NCBI_GenBank
Match: gi|1063520852|ref|XP_017981409.1| (PREDICTED: LOW QUALITY PROTEIN: cactin [Theobroma cacao]) HSP 1 Score: 66.6254 bits (161), Expect = 2.498e-9 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 0
Query: 112 LAESAEERAARKAAKEAKKI--ASMFGYTSHSNPFGDANLHQQFVWKAKEQQQASKKGGREGGQEVGEKKVSEAERRLELIREIEKVRKRREEREKE----QEEMERL 213
+AE ++A +KA + AKK+ ++ GY++ SNPFGD+NL+++FVW+ K +Q ++ + EKK R+ E + EIEKV+KRREER E +EEM L
Sbjct: 94 VAEYLAKKAQKKALRAAKKLKAQTVLGYSNDSNPFGDSNLNEKFVWREKIEQDVAQGVPLDTFSVKAEKK-----RQKERMAEIEKVKKRREERALEKAQHEEEMALL 196 The following BLAST results are available for this feature:
BLAST of EWM24508.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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