EWM24511.1, cds6163 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|585106011|gb|EWM24511.1| (uncharacterized protein Naga_100560g4 [Nannochloropsis gaditana]) HSP 1 Score: 381.719 bits (979), Expect = 3.076e-134 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query: 1 MWRRLRYDDSTAALALLSAERGRGLAADEATLGKQDEVLLGEDGGEGGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMERCDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
MWRRLRYDDSTAALALLSAERGRGLAADEATLGKQDEVLLGEDGGEGGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMERCDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR
Sbjct: 1 MWRRLRYDDSTAALALLSAERGRGLAADEATLGKQDEVLLGEDGGEGGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMERCDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|298706461|emb|CBJ29448.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 243.047 bits (619), Expect = 4.524e-74 Identity = 107/176 (60.80%), Postives = 133/176 (75.57%), Query Frame = 0
Query: 8 DDSTAALALLSAERGRGLAADEATLGKQDEVLLGEDGGEGGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMERCDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
D S A+ +L+ E+ +G+ E + DEV +G G+TYWW DK+RPRKPRYFNRVKTG+DWN YN+THYDHDNPPPKTVQGYKFNVFYPDLID+ P +F+E+ D+P F I+RFHAGPPYED+AFKI+N+EWE KRG++C+FERG+LSLYFNFK YR+
Sbjct: 460 DSSALAMGMLANEKSKGMGDQEEGMDLADEVDMG-------------GKTYWWHDKFRPRKPRYFNRVKTGYDWNKYNQTHYDHDNPPPKTVQGYKFNVFYPDLIDREDTPKYFLEKADHPGFAILRFHAGPPYEDIAFKIINREWEFGRKRGYRCVFERGVLSLYFNFKSLWYRK 622
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|470503587|ref|XP_004347748.1| (cactin, putative [Acanthamoeba castellanii str. Neff] >gi|440800887|gb|ELR21916.1| cactin, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 235.343 bits (599), Expect = 2.702e-71 Identity = 101/136 (74.26%), Postives = 119/136 (87.50%), Query Frame = 0
Query: 48 GAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMERCDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
E + G+ YWWQDKYRPRKPRY+NRV TG++WN YN++HYDHDNPPPKTVQGYKFNVFYPDLIDK KAP +F+E D+P+ IIRFHAGPPYEDVAFK++N+EWE SHKRGFKC+F+RGI+ L+FNFKR RYRR
Sbjct: 472 STEVALEGKKYWWQDKYRPRKPRYYNRVHTGYEWNKYNQSHYDHDNPPPKTVQGYKFNVFYPDLIDKQKAPRYFIEPSDSPDTCIIRFHAGPPYEDVAFKVVNREWEYSHKRGFKCVFDRGIMHLWFNFKRYRYRR 607
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|641845410|gb|KDO64298.1| (hypothetical protein CISIN_1g0055712mg, partial [Citrus sinensis]) HSP 1 Score: 231.106 bits (588), Expect = 1.041e-70 Identity = 102/138 (73.91%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 47 GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DKTKAPT+ +E+ N E IIRFHAGPPYED+AFKI+NKEWE SHK+GFKC FERGIL +YFNFKR RYRR
Sbjct: 354 SGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFKIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 491
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|641845409|gb|KDO64297.1| (hypothetical protein CISIN_1g0055712mg [Citrus sinensis]) HSP 1 Score: 230.72 bits (587), Expect = 1.505e-70 Identity = 102/138 (73.91%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 47 GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DKTKAPT+ +E+ N E IIRFHAGPPYED+AFKI+NKEWE SHK+GFKC FERGIL +YFNFKR RYRR
Sbjct: 363 SGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFKIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 500
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|641845411|gb|KDO64299.1| (hypothetical protein CISIN_1g0055712mg, partial [Citrus sinensis] >gi|641845412|gb|KDO64300.1| hypothetical protein CISIN_1g0055712mg, partial [Citrus sinensis] >gi|641845413|gb|KDO64301.1| hypothetical protein CISIN_1g0055712mg, partial [Citrus sinensis]) HSP 1 Score: 230.72 bits (587), Expect = 1.597e-70 Identity = 102/138 (73.91%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 47 GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DKTKAPT+ +E+ N E IIRFHAGPPYED+AFKI+NKEWE SHK+GFKC FERGIL +YFNFKR RYRR
Sbjct: 361 SGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFKIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 498
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|902221947|gb|KNA19049.1| (hypothetical protein SOVF_065250 isoform B [Spinacia oleracea]) HSP 1 Score: 234.572 bits (597), Expect = 1.701e-70 Identity = 109/182 (59.89%), Postives = 137/182 (75.27%), Query Frame = 0
Query: 14 LALLSAERGRGLAADEATLGKQDEV------LLG--EDGGE---GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
LA++ +R + A + +D++ ++G EDG GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DK KAPT+F+E+ D+ E IIRFHAGPPYED+AF+I+NKEWE SHK+G+KC FERGIL +YFNFKR RYRR
Sbjct: 478 LAVIEEQRAKEAMASKPRAQPEDDLEVRARKVMGVVEDGDAVFGAGAEINLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPTYFIEKDGDSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGYKCTFERGILHVYFNFKRYRYRR 659
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|947119554|gb|KRH67803.1| (hypothetical protein GLYMA_03G188600 [Glycine max]) HSP 1 Score: 231.106 bits (588), Expect = 1.861e-70 Identity = 104/146 (71.23%), Postives = 120/146 (82.19%), Query Frame = 0
Query: 42 EDGGE---GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
EDG GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DKTKAPT+ +E+ N E IIRFHAGPPYED+AF+I+NKEWE SHK+GFKC FERGIL +YFNFKR RYRR
Sbjct: 368 EDGDSVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCAFERGILHVYFNFKRHRYRR 513
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|902221946|gb|KNA19048.1| (hypothetical protein SOVF_065250 isoform A [Spinacia oleracea]) HSP 1 Score: 234.187 bits (596), Expect = 2.368e-70 Identity = 109/182 (59.89%), Postives = 137/182 (75.27%), Query Frame = 0
Query: 14 LALLSAERGRGLAADEATLGKQDEV------LLG--EDGGE---GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
LA++ +R + A + +D++ ++G EDG GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DK KAPT+F+E+ D+ E IIRFHAGPPYED+AF+I+NKEWE SHK+G+KC FERGIL +YFNFKR RYRR
Sbjct: 481 LAVIEEQRAKEAMASKPRAQPEDDLEVRARKVMGVVEDGDAVFGAGAEINLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPTYFIEKDGDSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGYKCTFERGILHVYFNFKRYRYRR 662
BLAST of EWM24511.1 vs. NCBI_GenBank
Match: gi|566175827|ref|XP_006381345.1| (hypothetical protein POPTR_0006s12020g [Populus trichocarpa] >gi|550336047|gb|ERP59142.1| hypothetical protein POPTR_0006s12020g [Populus trichocarpa]) HSP 1 Score: 233.802 bits (595), Expect = 3.418e-70 Identity = 103/138 (74.64%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 47 GGAEGEVVGRTYWWQDKYRPRKPRYFNRVKTGWDWNMYNRTHYDHDNPPPKTVQGYKFNVFYPDLIDKTKAPTFFMER-CDNPEFTIIRFHAGPPYEDVAFKILNKEWEKSHKRGFKCLFERGILSLYFNFKRARYRR 183
GAE + + YWW DKYRPRKP+YFNRV TG++WN YN+THYDHDNPPPK VQGYKFN+FYPDL+DK KAPTF +E+ DN E IIRFHAGPPYED+AFKI+NKEWE SHK+GFKC FERGIL +YFNFKR RYRR
Sbjct: 526 SGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPTFTIEKDGDNGETCIIRFHAGPPYEDIAFKIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 663 The following BLAST results are available for this feature:
BLAST of EWM24511.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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