EWM24530.1, cds6144 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|585106037|gb|EWM24530.1| (Regulatory factor, effector, bacterial [Nannochloropsis gaditana]) HSP 1 Score: 457.603 bits (1176), Expect = 5.576e-163 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query: 1 MNAHRICCVLFITITMPSTFASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVRVA 220
MNAHRICCVLFITITMPSTFASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVRVA
Sbjct: 1 MNAHRICCVLFITITMPSTFASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVRVA 220
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|168068011|ref|XP_001785891.1| (predicted protein [Physcomitrella patens] >gi|162662445|gb|EDQ49300.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 118.242 bits (295), Expect = 2.817e-29 Identity = 76/213 (35.68%), Postives = 109/213 (51.17%), Query Frame = 0
Query: 6 ICCVLFITITMPSTFASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAV-RVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWV 217
+ CV + T LF S ++ C S IE+P +++ YE+R+Y +E+W V + +F A GF F++ISG+NS+ KI MT PV + PD G+ V+FFVPS++ S ++P P D + A AV F GF T D++ ELKKAL DG ++ E+ V +AGY SPF + NR EV V
Sbjct: 12 LACVALTVVDGARTLPESVLQLFGVSDKESDSCGPQVS-IETPQCSVVEKRDTYELRDYNVKEIWVETLVPNSTFEMASFTGFYRCFNFISGKNSKNMKIEMTGPVHIKPTPDAN-GYKVAFFVPSRFKSVNDLPTPSDPKVHFYEPEKAVTAVIGPFGGFPTNKDYEAKFEELKKALDKDG---LKYNESTVTYAGYSSPFQFKNRKQEVHV 219
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|761903116|ref|XP_011409767.1| (PREDICTED: heme-binding protein 2-like [Amphimedon queenslandica]) HSP 1 Score: 112.849 bits (281), Expect = 1.908e-27 Identity = 71/202 (35.15%), Postives = 98/202 (48.51%), Query Frame = 0
Query: 21 ASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDD--QVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVRVA 220
AS L A+++ A + ++ P + + YE+R Y + W +R SF QA ++ F FDYISG NS+ +KIPM PV + P D + V FFVP + + P P D + + L T V F GF + D K+ E+K AL A GV V D A YDSPF ++RHNEVW+ A
Sbjct: 10 ASLLFTLISAASLKASDPPSFCHGLDCPVYKVTGKMGKYEIRSYE-QSKWVGTVIRGDSFTQAGSQAFHMLFDYISGANSQNQKIPMAVPVATKVVPLDGSMYNFTVFFFVPFAF--QANTPTPSDPKVFVQVLPALTAYVDSFSGFESNDDLKKHTEEMKAALTAAGVQYVHDFS---FTAEYDSPFKIIDRHNEVWLVAA 205
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|302764652|ref|XP_002965747.1| (hypothetical protein SELMODRAFT_439222 [Selaginella moellendorffii] >gi|300166561|gb|EFJ33167.1| hypothetical protein SELMODRAFT_439222 [Selaginella moellendorffii]) HSP 1 Score: 117.472 bits (293), Expect = 1.053e-26 Identity = 78/215 (36.28%), Postives = 119/215 (55.35%), Query Frame = 0
Query: 9 VLFITITMPSTF-----ASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVR-VFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWV 217
VLF+ +T+ ST + F V+ S +E C S IE+P + ++GYE+R+Y ++W V + S++ A + GF F YISG+N +GE I MTAPV +++ G+ +SF+ PS++ S +++P P D+++ + TYAV F GF T D++K LK+AL D VE V +AGY SPF +VNR EV +
Sbjct: 606 VLFVALTIASTAVAAPSSGFEQVVELYSAEGSESCGPKLS-IETPHCKIEARKNGYELRKYPKGQVWVETLVANSSYSAAVSVGFYRLFYYISGKNEKGEVIEMTAPVLV-HPYEERGGYKISFYAPSRFKSHKDLPKPMDKNVKFLETREHTYAVSGPFGGFPTEPDYEKRLKALKEALDKDD---VEYNGEKVYYAGYSSPFEFVNRKQEVHL 815
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|1026763971|gb|OAE24892.1| (hypothetical protein AXG93_2931s1350 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 108.227 bits (269), Expect = 1.705e-25 Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = 0
Query: 44 TIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAV-RVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVRV 219
+IE+P T+ + G+E+R Y ++W V + S+ QA + GF F +ISG+NS E I MT PV + AP+ GW ++FF PSKY S +VP P D ++ I+S + AV +F GF + D+ +LK L D D E+ +++AGY SPF +R EV V +
Sbjct: 54 SIETPVCTVEKKGDGFELRRYPAGQIWAETVVANSSYRQACSDGFYRCFYFISGKNSAKESIEMTGPVHIKPAPEAN-GWKIAFFTPSKYKSVADVPTPTDPNVKIVSTEESLVAVSNMFGGFPSERDYYTQWVKLKDEL--DSANLHYD-ESSLVFAGYSSPFEIFHRKQEVHVTI 226
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|302788160|ref|XP_002975849.1| (hypothetical protein SELMODRAFT_442995 [Selaginella moellendorffii] >gi|300156125|gb|EFJ22754.1| hypothetical protein SELMODRAFT_442995 [Selaginella moellendorffii]) HSP 1 Score: 112.079 bits (279), Expect = 8.140e-25 Identity = 77/215 (35.81%), Postives = 118/215 (54.88%), Query Frame = 0
Query: 9 VLFITITMPSTFA-----SFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVR-VFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWV 217
V+F+ +T+ S+ F V+ S +E C S IE+P + ++GYE+R+Y ++W V + S++ A + GF F YISG+N +GE I MTAPV +++ G+ VSF+ PS++ S +++P P D+++ + TYAV F GF T D++K LK+AL D VE V +AGY SPF +VNR EV +
Sbjct: 520 VVFVALTIASSAVAAPSSGFEQVVQLYSAEGSESCGPKLS-IETPHCKIEARKNGYELRKYPEGQVWVETLVANSSYSAAVSVGFYRLFYYISGKNEKGEVIEMTAPVLV-HPYEERGGYKVSFYAPSRFKSHKDLPKPMDKNVKFLVTKEHTYAVSGPFGGFPTEPDYEKRLKALKEALDKDD---VEYNGEKVYYAGYSSPFEFVNRKQEVHL 729
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|390360004|ref|XP_797226.3| (PREDICTED: heme-binding protein 2 [Strongylocentrotus purpuratus]) HSP 1 Score: 104.76 bits (260), Expect = 3.012e-24 Identity = 69/205 (33.66%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 24 TAVLFFASTVAAEVCHLYSST-------IESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFR----RAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLW-AGYDSPFVYVNRHNEVW 216
+ VL ST H+++ +E P FT +++ GYE R+Y E W S + S S+ A ++GF F+YI G N + +KI MTAPV R + P + + VSFF+P+++ + PAP D + ++ V+ F GFA+ D+ + EL +AL A + ++ + AGYDSPF +RHNEVW
Sbjct: 6 STVLLLISTHMCLSAHVFTQDAPKFCKGLECPEFTTIQSSEGYEERQY-SESKWVSTEIMSMSYDSASSQGFERLFNYIEGNNEQKQKIAMTAPVATRVIPGQGPACESNFTVSFFIPAEHSANP--PAPSDSDVFFTTIPAHRAYVKSFGGFASQDDWIQAGAELGRALDA-----LHSYDSSYYYTAGYDSPFTIFSRHNEVW 202
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|1072258259|ref|XP_018414325.1| (PREDICTED: heme-binding protein 1-like [Nanorana parkeri]) HSP 1 Score: 103.99 bits (258), Expect = 4.513e-24 Identity = 66/180 (36.67%), Postives = 89/180 (49.44%), Query Frame = 0
Query: 41 YSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAP--DDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWVR 218
+ + E P + +L+ + +EVR Y W + Y+ S S K F F YISGENS+G I M PV P D V +S F+PS S P P D SI + S P +Y VR F G+A D++KN L + L A G+ D + G + A Y+ P + RHNEVW R
Sbjct: 32 FCGSYECPRYQVLKKYNTFEVRRY-DSTFWVTTYLNSGSMGLGTMKSFRRLFKYISGENSQGISIKMNVPVRIT-VPLLDTNVNSTMSLFLPSALMSP---PTPNDPSIVLESFPPTSYYVRSFGGYAMTSDYEKNSKALSEELTALGL--AYDTQTG-MAAAYNDPLTFFGRHNEVWFR 203
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|340370234|ref|XP_003383651.1| (PREDICTED: heme-binding protein 1-like [Amphimedon queenslandica]) HSP 1 Score: 103.99 bits (258), Expect = 4.654e-24 Identity = 70/186 (37.63%), Postives = 93/186 (50.00%), Query Frame = 0
Query: 38 CHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRA--PDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYE----LKKALLADGVTPVEDAENGVLWAGYDSPFVYVNRHNEVWV 217
CH ++ P +T+ R YE R+Y + W + S S++QA +GF FDYI G N +G KIPM +PV + P Q + V FFVP Y S +P D ++SI SL T V F G+ + DK E E LK A+ GV V+ AGYD PF + RHNEVW+
Sbjct: 28 CH----GLDCPKYTVTRKIDDYEERQYEPSK-WVGTTITSDSYSQATEEGFKKLFDYIEGANKDGIKIPMASPVAVKIVPLPQGQSNYTVLFFVPFAYQSNTSIPT--DPTLSIASLPALTAYVGQFGGYMS----DKVEQEETTKLKNAMTKYGVQFVQQYS---FAAGYDPPFRVIGRHNEVWL 199
BLAST of EWM24530.1 vs. NCBI_GenBank
Match: gi|573902184|ref|XP_006638817.1| (PREDICTED: heme-binding protein 1-like [Lepisosteus oculatus]) HSP 1 Score: 103.605 bits (257), Expect = 1.029e-23 Identity = 74/185 (40.00%), Postives = 95/185 (51.35%), Query Frame = 0
Query: 38 CHLYSSTIESPCFTLLRNESGYEVREYRGEEMWTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVG----WLVSFFVPSKYPSREEVPAPKDESISIMSLGPATYAVRVFDGFATFGDFDKNEYELKKALLADGVT--PVEDAENGVLWAGYDSPFVYVNRHNEVW 216
CH ++ P +TL++ +E R Y W + V ++ A NKGFM F YI G N G KIPMTAPV P G VSFFVP+K P PKD +I ++L +T VR F GFA+ D+ +N L+ L A G++ PV + AGYDSPF NRHNEVW
Sbjct: 33 CH----KLDCPEYTLVKKHETFEERYYNASR-WMTTEVEG-NYKSAVNKGFMRLFYYIGGNNEAGIKIPMTAPVAVVVHPPTIDGNPKNISVSFFVPAK----SIPPKPKDLTIHELNLTGSTMYVRSFGGFASESDWTENAQALEADLKAAGISYDPVS-----YVAAGYDSPFRLFNRHNEVW 202 The following BLAST results are available for this feature:
BLAST of EWM24530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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