EWM24527.1, cds6142 (CDS) Nannochloropsis gaditana

Overview
NameEWM24527.1
Unique Namecds6142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:735072..735187 -
Alignment locationCM002467.1:733818..734928 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24527.1
Productdna replication licensing factor mcm5
Orig transcript idgnl|cribi|Naga_100427g1.10031.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:735072..735187 -
CM002467.1supercontigCM002467.1:733818..734928 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003688DNA replication origin binding
GO:0003682chromatin binding
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006260DNA replication
GO:0006270DNA replication initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042555MCM complex
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR027925MCM_N
IPR001208MCM_DNA-dep_ATPase
IPR008048MCM5
Homology
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|585106034|gb|EWM24527.1| (dna replication licensing factor mcm5 [Nannochloropsis gaditana])

HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLPGEEGRREGSRRGGRQGVRCRDLA 408
            MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLPGEEGRREGSRRGGRQGVRCRDLA
Sbjct:    1 MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLPGEEGRREGSRRGGRQGVRCRDLA 408          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|298714028|emb|CBJ27260.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 358.607 bits (919), Expect = 7.999e-114
Identity = 181/385 (47.01%), Postives = 255/385 (66.23%), Query Frame = 0
Query:    1 MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D+DR+T  N N    G    +D+       A+  FREF+R++R G+ F YR+QLLQRYR+ + +LE+N+GH++++   LL  L  +P EYLP++E+ A+EAL QL              ER EG    + +IQ+ +KSEQ+P  LR +AA +V +L+KV GII  A+ +RA+A +V  +C  C  +K +P    F G  LP  C+ +      G+  A+ G   C    +VI+ DE +Y+DQQ LKLQESPE VPTGEMPR+I +  +R L D+V+ GTRVSI+GI S ++  AA+      A+++ +++VVG+ VE EGAGRAS SFTP EEE F++M+R PDIYQK++SS++PSISG+YTVDIK+ALAC L  GSRK LP
Sbjct:    1 MDYDADRITFTNQNLAGPGQDDGLDDGNMSAMEAKRQFREFIRSYREGNLFPYRDQLLQRYRKRETYLEVNLGHVNEFRPDLLDMLTLRPVEYLPLFEQAAQEALKQLT------------TERVEGEP--LPEIQIVIKSEQMPTGLRSIAADHVNKLLKVPGIIISATRIRAKATSVAAKCKSCGCLKQLPCVGPFGGAALPMRCDKN------GQQAADGGEEDCGQAPFVIVPDECIYVDQQTLKLQESPEVVPTGEMPRNIIVVLDRNLVDKVSPGTRVSIMGIASLYNSAAAKKQVGGVAIRTPFMQVVGIAVESEGAGRASVSFTPAEEEKFLAMSRTPDIYQKMASSISPSISGDYTVDIKRALACLLFGGSRKHLP 365          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|813177423|ref|XP_012205181.1| (hypothetical protein SPRG_10832 [Saprolegnia parasitica CBS 223.65] >gi|641529896|gb|KDO24044.1| hypothetical protein SPRG_10832 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 294.278 bits (752), Expect = 2.394e-89
Identity = 164/346 (47.40%), Postives = 211/346 (60.98%), Query Frame = 0
Query:   41 FVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRP-LRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            F+R FR  + F+YR QL    RR    LEI +  L  Y+A L   L  +PA  LP+ E  A          A V              +G  + IQ+ LKS  +    LR + A  V RLVKV GII  AS VRA+ ++V VQC  C   K +P  + FSG+QLP  CE    N   GEG  ++ A  C   +Y+I+ D+  Y+DQQ LKLQESPE VPTGEMPR++ LSC+RYL DR   GTRVSI+GI S F+  A R   A  A+++ Y++VVG+E++ EGAGRA   FTP EEE F  MAR PD+Y+KL++S+APSI G+YTV+IKKA+AC L+ GSRK LP
Sbjct:   36 FLRGFREDTTFVYRQQLTSHVRRSHLLLEIELRDLTSYDAELGDMLLTKPATMLPLLETAA----------ATVA-------------KGSTSHIQVVLKSASLESLRLRDIHATQVNRLVKVPGIIISASKVRAKCMSVMVQCKTCGHTKKLPCPNAFSGVQLPRSCERQAENQ--GEGALQSDA--CAKDSYIIVPDKCEYVDQQTLKLQESPEVVPTGEMPRNLLLSCDRYLVDRAPPGTRVSILGISSVFNSGAKRQVGAI-AIRTPYLKVVGIEIDEEGAGRARAVFTPSEEEKFHEMARDPDLYEKLATSIAPSIYGDYTVNIKKAIACLLVGGSRKRLP 353          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|568009721|gb|ETL83919.1| (hypothetical protein L917_16196, partial [Phytophthora parasitica])

HSP 1 Score: 280.796 bits (717), Expect = 6.364e-87
Identity = 155/389 (39.85%), Postives = 227/389 (58.35%), Query Frame = 0
Query:    1 MDFDSDRVTVVNT-NPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGD---DPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D+ RV+ V   + Q + A Q    +  ++         F+R FR+G  F YR QLL   RR  +++ +N+ H+  ++  L   L   P E LP+ E  A+E L+QLL+ +   G  +            + DIQ  L S+Q P  LR + +  + RLVKV GI+  A+ VR + V+  ++C  C   K + A  G  G+ +P  C+ +   D     GE         C   +YV+L D+  Y+DQQ LKLQE+PE VPTGEMPR+++L  +R+L DR + GTRVS++GI S  +  A      + A+++ Y+RVVG+E++ EGAGRA  +F+P EEE F  MAR P +Y+KL++S+APSI G+YTV+IKKA+AC L  GSRK LP
Sbjct:    1 MDWDAGRVSAVGMESAQASDARQGASPAALQRR-----LLAFLRGFRVGPLFYYREQLLANARRSHWFVTVNLSHVAAFDQELQDLLLKSPKEQLPLLENAAKEMLTQLLVSSQDAGAPD--SSTSGISSSNLPDIQAILTSDQAPVALRHVHSQEINRLVKVPGIVISATRVRTKCVSATLKCRNCGHTKRV-AVVGMGGVSIPRICDRNREEDNGVTPGE--------MCPKDSYVVLPDQGHYVDQQTLKLQENPEVVPTGEMPRNLALVADRHLVDRASPGTRVSVVGITSVVN--AGGKNVGAVAIRTLYLRVVGIEIDEEGAGRAKATFSPAEEEKFHEMARDPKLYEKLATSIAPSIYGDYTVNIKKAIACLLAGGSRKRLP 371          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|570941610|gb|ETP06867.1| (hypothetical protein F441_16793 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 281.182 bits (718), Expect = 3.794e-86
Identity = 154/386 (39.90%), Postives = 228/386 (59.07%), Query Frame = 0
Query:    1 MDFDSDRVTVVNT-NPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D+ RV+ V   + Q + A Q    +  ++         F+R FR+G  F YR QLL   RR  +++ +N+ H+  ++  L   L   P E LP+ E  A+E L+QLL+ +   G  +            + DIQ  L S+Q P  LR + +  + RLVKV GI+  A+ VR + V+  ++C  C   K + A +G  G+ +P  C+ +       + G   G   C   +YV+L D+  Y+DQQ LKLQE+PE VPTGEMPR+++L  +R+L DR + GTRVS++GI S  +  A      + A+++ Y+RVVG+E++ EGAGRA  +F+P EEE F  MAR P +Y+KL++S+APSI G+YTV+IKKA+AC L  GSRK LP
Sbjct:    1 MDWDAGRVSAVGMESAQASDARQGASPAALQRR-----ILAFLRGFRVGPLFYYREQLLANARRSHWFVTVNLSHVAVFDQELQDLLLKSPKEQLPLLENAAKEMLTQLLVSSQDAGAPD--SSTSGISSSNLPDIQAILTSDQAPVALRHVHSQEINRLVKVPGIVISATRVRTKCVSATLKCRNCGHTKRV-AVAGMGGVSIPRICDRNREE----DNGVTPGE-MCPKDSYVVLPDQGHYVDQQTLKLQENPEVVPTGEMPRNLALVADRHLVDRASPGTRVSVVGITSVVN--AGGKNVGAVAIRTLYLRVVGIEIDEEGAGRAKATFSPAEEEKFHEMARDPKLYEKLATSIAPSIYGDYTVNIKKAIACLLAGGSRKRLP 371          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|669145974|ref|XP_008608549.1| (hypothetical protein SDRG_04649 [Saprolegnia diclina VS20] >gi|530739980|gb|EQC38222.1| hypothetical protein SDRG_04649 [Saprolegnia diclina VS20])

HSP 1 Score: 285.804 bits (730), Expect = 3.932e-86
Identity = 161/346 (46.53%), Postives = 208/346 (60.12%), Query Frame = 0
Query:   41 FVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRP-LRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            F+R FR  + F+YR QL    RR    LEI +  L  Y+A L   L  +P   LP+ E  A          A V              +G  + IQ+ LKS  +    LR + A  V RLVKV GII  AS VRA+ ++V VQC  C   K +P  + FSG+QLP  CE    +   G   +EA    C   +Y+I+ D+  Y+DQQ LKLQESPE VPTGEMPR++ LSC+RYL DR   GTRVSI+GI S F+  A R   A  A+++ Y++VVG+E++ EGAGRA   FTP EEE F  MAR PD+Y+KL++S+APSI G+YTV+IKKA+AC L+ GSRK LP
Sbjct:   36 FLRGFREDTTFVYRQQLTSHVRRSHLLLEIELRDLTSYDAELGDMLLTKPGTMLPLLEAAA----------ATVA-------------KGSTSHIQVVLKSASLESLRLRDIHATQVNRLVKVPGIIISASKVRAKCMSVMVQCKTCGHSKKLPCPNAFSGVQLPRNCERQAESQSDGIVPSEA----CAKDSYIIVPDKCEYVDQQTLKLQESPEVVPTGEMPRNLLLSCDRYLVDRAPPGTRVSILGISSVFNSGAKRQVGAI-AIRTPYLKVVGIEIDEEGAGRARAVFTPSEEEKFHEMARDPDLYEKLATSIAPSIYGDYTVNIKKAIACLLVGGSRKRLP 353          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|567951553|gb|ETK77251.1| (hypothetical protein L915_16473, partial [Phytophthora parasitica])

HSP 1 Score: 278.485 bits (711), Expect = 4.205e-86
Identity = 154/389 (39.59%), Postives = 227/389 (58.35%), Query Frame = 0
Query:    1 MDFDSDRVTVVNT-NPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGD---DPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D+ RV+ V   + Q + A Q    +  ++         F+R FR+G  F YR QLL   RR  +++ +N+ H+  ++  L   L   P E LP+ E  A+E L+QLL+ +   G  +            + DIQ  L S+Q P  LR + +  + RLVKV GI+  A+ VR + V+  ++C  C   K + A +G  G+ +P  C+ +   D     GE         C   +YV+L D+  Y+DQQ LKLQE+PE VPTGEMPR+++L  +R+L DR + GTRVS++GI S  +  A      + A+++ Y+RVVG+E++ EGAGRA  +F+P EEE F  MAR P +Y+KL++S+APSI G+YTV+IKKA+AC L   SRK LP
Sbjct:    1 MDWDAGRVSAVGMESAQASDARQGASPAALQRR-----LLAFLRGFRVGPLFYYREQLLANARRSHWFVTVNLSHVAAFDQELQDLLLKSPKEQLPLLENAAKEMLTQLLVSSQDAGAPD--SSTSGISSSNLPDIQAILTSDQAPVALRHVHSQEINRLVKVPGIVISATRVRTKCVSATLKCRNCGHTKRV-AVAGMGGVSIPRICDRNREEDNGVTPGE--------MCPKDSYVVLPDQGHYVDQQTLKLQENPEVVPTGEMPRNLALVADRHLVDRASPGTRVSVVGITSVVN--AGGKNVGAVAIRTLYLRVVGIEIDEEGAGRAKATFSPAEEEKFHEMARDPKLYEKLATSIAPSIYGDYTVNIKKAIACLLAGRSRKRLP 371          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|695421387|ref|XP_009528159.1| (hypothetical protein PHYSODRAFT_509379 [Phytophthora sojae] >gi|348674592|gb|EGZ14410.1| hypothetical protein PHYSODRAFT_509379 [Phytophthora sojae])

HSP 1 Score: 286.189 bits (731), Expect = 5.312e-86
Identity = 157/391 (40.15%), Postives = 231/391 (59.08%), Query Frame = 0
Query:    1 MDFDSDRVTVVNT-NPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLL-----EAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D+ RV+ V   + Q + A Q    +  ++         F+R FR+G  F YR QLL   RR  +++ +N+ H+  ++  L   L   P E LP+ E  A+E L+QLL+     EA   G      +        + DIQ  L S+Q   PLR + A  + RLVKV GI+  A+ VR + V+  ++C  C   K + A SG  G+ +P  C+ +       E  + A    C   +Y++L D+  Y+DQQ LKLQE+PE VPTGEMPR+++L  +R+L DR + GTRVS++GI S  +  A   +  + A+++ Y+RVVG+E++ EGAGRA  +F+P EEE F  MAR P++Y+KL++S+APSI G+YTV+IKKA+AC L  GSRK LP
Sbjct:    1 MDWDAGRVSAVGMESAQASDARQSASPAALQRR-----LLAFLRGFRVGPLFFYREQLLANARRNHWFVTVNLSHVAAFDQELQDLLLKNPKEQLPLLESAAKEMLAQLLVASQSAEAGGVGADALAADSARAATSNLPDIQAILTSDQAAVPLRHVHAQEINRLVKVPGIVISATRVRTKCVSATLRCRNCGHTKRV-AVSGMGGVSIPRVCDRNRE-----EDASVAAGDLCPKDSYMVLPDKGEYVDQQTLKLQENPEVVPTGEMPRNLALIADRHLVDRASPGTRVSVVGITSVVN--AGGKSVGAVAIRTLYLRVVGIEIDEEGAGRAKATFSPAEEEKFHEMARHPELYEKLATSIAPSIYGDYTVNIKKAIACLLAGGSRKRLP 378          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|698807088|ref|XP_009836573.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574108554|gb|ETV74061.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 279.256 bits (713), Expect = 8.583e-86
Identity = 153/346 (44.22%), Postives = 206/346 (59.54%), Query Frame = 0
Query:   41 FVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQVPRP-LRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            F+R FR  + F+YR QL    RR    LE+ +  L  Y+A L      +PA+ LP+ E  A +   Q     P                     IQ+ LKS  +    LR + A  V RLVKV GI+  +S VRA+ +++ VQC  C  VK +P  S F G+ +P  C+    N    EG        C   +YVI+ D+  Y+DQQ LKLQESPE VPTGEMPR + LSC+RYL D+ + GTRVSI+GI S F+   A+    + A+++ Y+RVVG+E++ EGAGRA   FTP+EEE+F  MAR P++Y+KLS+S+APSI G+YTV+IKKA+AC L+ GSRK LP
Sbjct:   41 FLRGFREENTFVYRAQLTSHLRRSHLVLEVELRDLTSYDAELGDMFLSKPAQMLPLLEAAAAQVAKQQQQSLP---------------------IQIVLKSAAMESLRLRDVHASQVNRLVKVPGIVISSSKVRAKCMSISVQCKNCGHVKNLPCPSAFQGVAVPRNCDRRAQND--AEGSMGVLQQDCPKDSYVIVPDKCSYVDQQTLKLQESPEVVPTGEMPRHLLLSCDRYLVDKASPGTRVSILGISSVFN---AKKQVGAVAIRTPYLRVVGIEIDEEGAGRAKVVFTPREEEIFADMARDPNLYEKLSASIAPSIYGDYTVNIKKAIACLLIGGSRKRLP 360          
BLAST of EWM24527.1 vs. NCBI_GenBank
Match: gi|1173935826|gb|OQR86881.1| (DNA replication licensing factor MCM5 [Achlya hypogyna])

HSP 1 Score: 285.034 bits (728), Expect = 1.203e-85
Identity = 169/386 (43.78%), Postives = 219/386 (56.74%), Query Frame = 0
Query:    1 MDFDSDRVTVVNTNPQYTGAAQVVDESLFEKERARNSFREFVRNFRLGSDFLYRNQLLQRYRRGQYWLEINIGHLHDYEARLLKHLQDQPAEYLPVYEKGAREALSQLLLEAPVGGGMEGREEREEGMEGGVADIQLTLKSEQV-PRPLRQLAAGNVGRLVKVSGIITGASAVRARAVAVRVQCSQCHLVKVIPAQSGFSGIQLPTYCEGDDPNAMVGEGGAEAGAGKCKSRNYVILADESVYIDQQPLKLQESPETVPTGEMPRSISLSCERYLADRVAAGTRVSIIGIFSTFSHMAARGTAASHAVKSAYIRVVGLEVEVEGAGRASTSFTPKEEELFVSMARQPDIYQKLSSSLAPSISGEYTVDIKKALACQLLSGSRKTLP 385
            MD+D   VT +       GAA     S ++  R   SF   +R FR  ++F+YR QL    RR    LEI +  L  Y+  L   +  +PA  LP             LLEA  G          +  +G  A IQ+ LKS  +    LR + A  V RLVKV GII  AS VRA+ ++V VQC  C  +K +P  S F G+ LP  CE        G          C   +Y+I+ D+  Y+DQQ LKLQESPE VPTGEMPR++ L+C+RYL DR   GTRVSI+GI S F+  A R   A  A+++ Y+RVVG+E++ EGAGRA   FTP EEE F  MAR P +Y+KL++S+APSI G+YTV+IKKA+AC L+ GSRK LP
Sbjct:    1 MDWDRGAVTSLAG-----GAATSTSTSSYDLTRRCVSF---LRGFREDTNFVYRTQLTSHVRRSHLLLEIELRDLTSYDPELGDMVLTKPATMLP-------------LLEAAAG----------QVAKGTTAHIQVVLKSASLEALRLRDIHATQVNRLVKVPGIIISASKVRAKCMSVTVQCKNCSHIKKLPCMSAFGGVSLPRNCERKAEQQSDGTAIGGVLDEDCPKDSYIIVPDKCEYVDQQTLKLQESPEVVPTGEMPRNLLLACDRYLVDRAPPGTRVSILGISSVFNSGAKRQVGAV-AIRTPYLRVVGIEIDEEGAGRARAVFTPSEEEKFHEMARDPQLYEKLATSIAPSIYGDYTVNIKKAIACLLIGGSRKRLP 354          
The following BLAST results are available for this feature:
BLAST of EWM24527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106034|gb|EWM24527.1|0.000e+0100.00dna replication licensing factor mcm5 [Nannochloro... [more]
gi|298714028|emb|CBJ27260.1|7.999e-11447.01conserved unknown protein [Ectocarpus siliculosus][more]
gi|813177423|ref|XP_012205181.1|2.394e-8947.40hypothetical protein SPRG_10832 [Saprolegnia paras... [more]
gi|568009721|gb|ETL83919.1|6.364e-8739.85hypothetical protein L917_16196, partial [Phytopht... [more]
gi|570941610|gb|ETP06867.1|3.794e-8639.90hypothetical protein F441_16793 [Phytophthora para... [more]
gi|669145974|ref|XP_008608549.1|3.932e-8646.53hypothetical protein SDRG_04649 [Saprolegnia dicli... [more]
gi|567951553|gb|ETK77251.1|4.205e-8639.59hypothetical protein L915_16473, partial [Phytopht... [more]
gi|695421387|ref|XP_009528159.1|5.312e-8640.15hypothetical protein PHYSODRAFT_509379 [Phytophtho... [more]
gi|698807088|ref|XP_009836573.1|8.583e-8644.22hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|1173935826|gb|OQR86881.1|1.203e-8543.78DNA replication licensing factor MCM5 [Achlya hypo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6157rna6157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications