EWM30066.1, cds613 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|585112698|gb|EWM30066.1| (r- vamp71-family [Nannochloropsis gaditana]) HSP 1 Score: 494.197 bits (1271), Expect = 5.311e-177 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCKK 237
MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCKK
Sbjct: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCKK 237
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|553188735|ref|XP_005854856.1| (vesicle-associated membrane protein 7 [Nannochloropsis gaditana CCMP526] >gi|422294210|gb|EKU21510.1| vesicle-associated membrane protein 7 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 395.971 bits (1016), Expect = 8.587e-139 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKR 191
MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKR
Sbjct: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKR 191
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|1214700589|gb|OWZ13143.1| (Vesicle-associated membrane protein [Phytophthora megakarya]) HSP 1 Score: 245.743 bits (626), Expect = 5.005e-79 Identity = 120/235 (51.06%), Postives = 172/235 (73.19%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKC 235
M I+YALV+R KTVLAE+T+TSGNFPTVTR LLA+I ++ +MS +YD+HIFHY+V+G + YLCM DD + KRR+ FLFLE+++ RF AAYG+ A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL+RGEK ELLVD+TD+L++Q+V+F+R S +L++SMW R + +LLL F ++ + ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIP-----------TNDGRMSYVYDRHIFHYIVEGG------ITYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMWRRNVKLWLLLVFVGLFVIYLVISMAC-GFDFSGC 216
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|953492985|emb|CEG44931.1| (vesicle-associated membrane [Plasmopara halstedii]) HSP 1 Score: 242.276 bits (617), Expect = 1.297e-77 Identity = 122/236 (51.69%), Postives = 168/236 (71.19%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLS-FGLALALFFLTTLGCGGFDFHKC 235
M I+YALV+R KTVLAE+T+TSGNFPTVTR LLA+I + + +MS +YD+HIFHY+V+G + YLCM DD + KRR+ FLFLE+++ RF A YG A TAIAFAMN+ F + ++D+YNA+P AD+L +++ +IDD K +MVENID+VLERGEK ELLVD+TD+L++Q+V+F+R S L ++MW R L +L+L FGL ++ + + C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIPN-----------TAGRMSYVYDRHIFHYIVEGG------VTYLCMADD-DLKRRVPFLFLEDMKNRFQATYGQHALTAIAFAMNDQFQHEIHRLLDYYNANPDADSLSKVKQQIDDVKDIMVENIDKVLERGEKFELLVDRTDKLNRQSVKFERSSTNLYKTMWRRNLKLWLMLVIFGL-FVIYLIIAMAC-GFDFSGC 216
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|675162313|ref|XP_008890041.1| (hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >gi|567971916|gb|ETK96912.1| hypothetical protein L915_00462 [Phytophthora parasitica] >gi|568000236|gb|ETL50257.1| hypothetical protein L916_00466 [Phytophthora parasitica] >gi|568029396|gb|ETM03322.1| hypothetical protein L917_00437 [Phytophthora parasitica] >gi|568060037|gb|ETM56583.1| hypothetical protein L914_00461 [Phytophthora parasitica] >gi|568109306|gb|ETN23913.1| hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >gi|570337942|gb|ETO85890.1| hypothetical protein F444_00486 [Phytophthora parasitica P1976] >gi|570961985|gb|ETP26964.1| hypothetical protein F441_00489 [Phytophthora parasitica CJ01A1] >gi|570998803|gb|ETP54934.1| hypothetical protein F442_00479 [Phytophthora parasitica P10297] >gi|970648687|gb|KUF88158.1| Vesicle-associated membrane protein 7B [Phytophthora nicotianae]) HSP 1 Score: 241.891 bits (616), Expect = 1.798e-77 Identity = 119/235 (50.64%), Postives = 170/235 (72.34%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKC 235
M I+YALV+R KTVLAE+T+TSGNFPTVTR LLA+I + +MS +YD+HIFHY+V+G + YLCM DD + KRR+ FLFLE+++ RF AAYG+ A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL+RGEK ELLVD+TD+L++Q+V+F+R S +L++SMW R + +LLL ++ + ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIP-----------PTDGRMSYVYDRHIFHYIVEGG------VTYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMWRRNVKLWLLLVTVGLFVIYLVISMAC-GFDFSGC 216
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|301100552|ref|XP_002899366.1| (vesicle-associated membrane protein, putative [Phytophthora infestans T30-4] >gi|262104283|gb|EEY62335.1| vesicle-associated membrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 241.121 bits (614), Expect = 3.424e-77 Identity = 119/235 (50.64%), Postives = 171/235 (72.77%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKC 235
M I+YALV+R KTVLAE+T+TSGNFPTVTR LLA+I + +MS +YD+HIFHY+V+G + YLCM DD + KRR+ FLFLE++++RF +AYG+ A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL+RGEK ELLVD+TD+L++Q+V+F+R S +L++S+W R + +LLL G+ L + +L GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIP-----------PTDGRMSYVYDRHIFHYIVEGG------VTYLCMADD-DLKRRVPFLFLEDMKKRFQSAYGERALTAIAFAMNDQFQHEIRHLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSIWRRNVKLWLLL-VGIGLFVIYLVISMACGFDFSGC 216
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|635361786|emb|CCI49343.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 239.58 bits (610), Expect = 1.214e-76 Identity = 117/237 (49.37%), Postives = 166/237 (70.04%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCKK 237
M I+YALV+RGK+VLAE+T+TSGNFPTVTR LLA+I + +MS +YD H FHY+VD Q + YLCM D A+ KRR+++LFLEE++ RF+A YGD TAIAFAMNE F ++ +MDFYN +P AD++ +++ +IDD K VMVENI++VL+RGEK ELLVD+TD+L++Q+V+F+ + L++ +W R + + LL F ++ + ++ C GFDF C K
Sbjct: 1 MPIVYALVSRGKSVLAEYTATSGNFPTVTRVLLAKIP-----------PTDGRMSYVYDSHTFHYIVDNQ------VTYLCMAD-AQYKRRVSYLFLEELKSRFLAKYGDRGITAIAFAMNEEFQHEIRRLMDFYNENPDADSVTRVQRQIDDVKEVMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFEHSANHLRKQIWRRNVKLWALLIFFGIFLIYLIVSMAC-GFDFSACGK 218
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|566034241|gb|ETI57152.1| (hypothetical protein F443_00493 [Phytophthora parasitica P1569]) HSP 1 Score: 237.269 bits (604), Expect = 1.163e-75 Identity = 118/235 (50.21%), Postives = 169/235 (71.91%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKC 235
M I+YALV+R KTVLAE+T+TSGNFPTVTR LLA+I + +MS +YD+HIFHY+V+G + YLCM DD + KRR+ FLFLE+++ RF AAYG+ A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL+RGEK ELLVD+TD+L++Q+V+F+R S +L++SM R + +LLL ++ + ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYTATSGNFPTVTRVLLAKIP-----------PTDGRMSYVYDRHIFHYIVEGG------VTYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMCRRNVKLWLLLVTVGLFVIYLVISMAC-GFDFSGC 216
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|1173957945|gb|OQS04380.1| (vesicle-associated membrane protein [Thraustotheca clavata]) HSP 1 Score: 234.958 bits (598), Expect = 1.138e-74 Identity = 119/239 (49.79%), Postives = 163/239 (68.20%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARI--EDKGVSQGSNGESSGQKMSIIYDQHIFHYLV-DGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCK 236
MAI+YALVARGK VLAE+T++SGNFPTVTR LLA+I ED KMS +YD H+FHY+V DG + YLCM D+ + KRR+ F FLE+++ RF+ YGD TAIAFAMN F ++ MD++NA+P D + Q++ +D+ K MVENI++VL RGEK ELLVD+TD+L+QQ+ F R+SR+L+++MWWR + +L L L ++F+ ++ C GFDF CK
Sbjct: 1 MAIVYALVARGKIVLAEYTASSGNFPTVTRVLLAKIPLED-------------SKMSYVYDMHVFHYIVKDG-------ITYLCMADN-DFKRRVPFQFLEDMKNRFLTTYGDRGRTAIAFAMNAEFQHVIQRQMDYFNANPEVDTVIQVQQSLDEVKDTMVENIEKVLGRGEKFELLVDRTDQLNQQSFVFNRKSRKLRKAMWWRSMKMWLCLGCLAVLIIYFVISMAC-GFDFSSCK 217
BLAST of EWM30066.1 vs. NCBI_GenBank
Match: gi|676393301|ref|XP_009039928.1| (hypothetical protein AURANDRAFT_70318 [Aureococcus anophagefferens] >gi|323449389|gb|EGB05277.1| hypothetical protein AURANDRAFT_70318 [Aureococcus anophagefferens]) HSP 1 Score: 234.958 bits (598), Expect = 1.269e-74 Identity = 124/239 (51.88%), Postives = 164/239 (68.62%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHYLVDGQGHASSPLIYLCMVDDAEN-KRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQ--QLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCK 236
M ILYALVARGKTVL+EFT TSGNFPT+TR LL RI+ + KMS IYDQ++FHY+ + L+YLCM DD ++ KRR+ F FLE+V+RRF+AAYGD A TAIAFAMN FS L+ M+ +N P D Q + K+DD K+VMV+NI+ VLERGEK+ELLVDKTDRL+ A F++ SR+L+++M+W+++ Y+L L +F +T + CG DF KC+
Sbjct: 1 MTILYALVARGKTVLSEFTFTSGNFPTITRLLLGRID----------MARSGKMSYIYDQYVFHYVCE------EGLLYLCMCDDPDSQKRRVPFAFLEDVKRRFLAAYGDVAQTAIAFAMNLEFSRVLQQQMELFNG-PMGDRQQFNAVHQKLDDVKNVMVQNIEMVLERGEKLELLVDKTDRLNTTAFTFEKSSRKLKEAMFWKKVKLYMLAIGLLGFVVFIITWVACGA-DFGKCR 221 The following BLAST results are available for this feature:
BLAST of EWM30066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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