EWM24545.1, cds6129 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|585106054|gb|EWM24545.1| (pairing protein 2 family protein [Nannochloropsis gaditana]) HSP 1 Score: 859.366 bits (2219), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query: 1 MDSESDSEASSEEETQSSSEEEEEGEEEEEEEDEEEEEDEEEDENLDDASHSSGSQVSHPASGSKALKAPTQKRPGPAPGAGDKGKKRQASSSPASPALNFSSKAAKAKSSNQKPDYPAKGMAKKKTGNSSKRGASDMEVEDGTIEAENSPTIAAESTKECPDPASSSSHTPSEARDTKLTPGTSRAASSPPLPCPNADKLTAAIEKPKARAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGVSLPALGGGT 429
MDSESDSEASSEEETQSSSEEEEEGEEEEEEEDEEEEEDEEEDENLDDASHSSGSQVSHPASGSKALKAPTQKRPGPAPGAGDKGKKRQASSSPASPALNFSSKAAKAKSSNQKPDYPAKGMAKKKTGNSSKRGASDMEVEDGTIEAENSPTIAAESTKECPDPASSSSHTPSEARDTKLTPGTSRAASSPPLPCPNADKLTAAIEKPKARAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGVSLPALGGGT
Sbjct: 1 MDSESDSEASSEEETQSSSEEEEEGEEEEEEEDEEEEEDEEEDENLDDASHSSGSQVSHPASGSKALKAPTQKRPGPAPGAGDKGKKRQASSSPASPALNFSSKAAKAKSSNQKPDYPAKGMAKKKTGNSSKRGASDMEVEDGTIEAENSPTIAAESTKECPDPASSSSHTPSEARDTKLTPGTSRAASSPPLPCPNADKLTAAIEKPKARAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGVSLPALGGGT 429
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|1214679013|gb|OWY98917.1| (Pairing protein, partial [Phytophthora megakarya]) HSP 1 Score: 117.472 bits (293), Expect = 5.451e-27 Identity = 75/216 (34.72%), Postives = 114/216 (52.78%), Query Frame = 0
Query: 211 RAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGVS-LPAL 425
+A DA++ +L+YM RPY NVF+N+H+ I K ++ T+LD L + K +GK+KIY L P E ALE + K + + S E + + L D L+ AL L E A EK +E L + GRAP+ + + L+ + +R W +RKR AM+ V +ADG K+ ++D++G+ETDEEAG+ LP +
Sbjct: 14 KAADAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTTLLDNLTAKEELVSKTYGKAKIYYMNQSNL-PVPSEAERLALEEQIKVVTADCVASEQELKSAEATLASIKSQLSDADLDAALKQLDEEAATLEKKMETL-----DQPGRAPVSPGRKEALKRKFTKYRTAWVSRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEEAGIKELPTV 223
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|1173948929|gb|OQR97013.1| (pairing protein 2 family protein [Achlya hypogyna]) HSP 1 Score: 118.242 bits (295), Expect = 1.624e-26 Identity = 83/230 (36.09%), Postives = 120/230 (52.17%), Query Frame = 0
Query: 206 EKPK--ARAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVA-----PPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEK--LRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGVS-LPAL 425
EKPK A+ +++YM RPY NVF+NLH+ IGK +Q +LD LA+ G I K +GKS+IY PPP LAR A+E+ +QE + E + GL + + LT ++E+ A+ +TL RL + R AP K K + ++R W RKR MEAV+ +A+G K+ D++D++G+ETDE AG+ LPAL
Sbjct: 94 EKPKELVSQSQAEGEVVKYMRQTNRPYSVLNVFENLHRRIGKVMLQKILDALAEKGDIKVKTYGKSQIYYYNQEKLPPPC--AATLARTEEAIEAVSGEVQELERALK--------EAESILHGLSNQMTDAELTQQLSEHTAQAETLSAAVTRLDDPTRAPVAPEKK---KAATAKFTTYRMGWIKRKRIVMEAVDQIAEGMEKKRKDVLDLVGVETDESAGIKELPAL 310
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|301103907|ref|XP_002901039.1| (pairing protein 2 family protein [Phytophthora infestans T30-4] >gi|262101377|gb|EEY59429.1| pairing protein 2 family protein [Phytophthora infestans T30-4]) HSP 1 Score: 117.472 bits (293), Expect = 3.972e-26 Identity = 76/221 (34.39%), Postives = 115/221 (52.04%), Query Frame = 0
Query: 207 KPK-ARAGDAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
KPK AGDA++ +L+YM RPY NVF+N+H+ I K ++ LD L + K +GK+KIY L P E A+E + K + E + S E + ++ + D + AL L E AA E +E L + GRAP+ + L+ + +R W RKR AM+ V +ADG K+ ++D++G+ETDEEAG+ +LP +
Sbjct: 99 KPKPMSAGDAEAAVLDYMRKTNRPYSLLNVFENMHRVIAKPSLTKPLDNLVVKEELASKTYGKAKIYYLNQNNL-PVPSEEERLAIEEQIKTVTAECTASEQELKSAETTLSGISSQISDADFDAALNQLEDEAAALETKVETL-----DQPGRAPVSPGRKNALKRKFTKYRTAWVQRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEEAGIKTLPTI 313
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|568018835|gb|ETL92998.1| (hypothetical protein L917_08736 [Phytophthora parasitica] >gi|568018836|gb|ETL92999.1| hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 117.087 bits (292), Expect = 4.255e-26 Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+E + K + E + S E + + + D L+ AL L E A EK +E L + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIEEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAATLEKKVETL-----DQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|675194163|ref|XP_008905966.1| (hypothetical protein PPTG_11608 [Phytophthora parasitica INRA-310] >gi|675194165|ref|XP_008905967.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568093991|gb|ETN08779.1| hypothetical protein PPTG_11608 [Phytophthora parasitica INRA-310] >gi|568093992|gb|ETN08780.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 117.087 bits (292), Expect = 4.341e-26 Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+E + K + E + S E + + + D L+ AL L E A EK +E L + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIEEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAATLEKKVETL-----DQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|567960905|gb|ETK86452.1| (hypothetical protein L915_08896 [Phytophthora parasitica] >gi|567960906|gb|ETK86453.1| hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 117.087 bits (292), Expect = 5.254e-26 Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+E + K + E + S E + + + D L+ AL L E A EK +E L + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIEEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAATLEKKVETL-----DQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|570984919|gb|ETP44367.1| (hypothetical protein F442_09010 [Phytophthora parasitica P10297] >gi|570984920|gb|ETP44368.1| hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 115.931 bits (289), Expect = 1.259e-25 Identity = 74/213 (34.74%), Postives = 114/213 (53.52%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+E + K + E + S E + + + D L+ AL L E A TLEK ++K + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIEEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAA----TLEK-KVKTLDQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|570327270|gb|ETO75218.1| (hypothetical protein F444_09132 [Phytophthora parasitica P1976] >gi|570327271|gb|ETO75219.1| hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 115.931 bits (289), Expect = 1.419e-25 Identity = 74/213 (34.74%), Postives = 114/213 (53.52%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+E + K + E + S E + + + D L+ AL L E A TLEK ++K + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIEEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAA----TLEK-KVKTLDQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315
BLAST of EWM24545.1 vs. NCBI_GenBank
Match: gi|970629385|gb|KUF76652.1| (Pairing protein 2 family protein [Phytophthora nicotianae] >gi|970659560|gb|KUF97189.1| Pairing protein 2 family protein [Phytophthora nicotianae]) HSP 1 Score: 114.775 bits (286), Expect = 3.165e-25 Identity = 72/213 (33.80%), Postives = 111/213 (52.11%), Query Frame = 0
Query: 214 DAKSVILEYMINAARPYGAQNVFDNLHKTIGKGTVQTVLDQLADSGAITRKEFGKSKIYVAPPPALDPTELARETAALESRWKALQEEKSQWTGRKGSLEGEVRRLNQGLDDTALETALTTLIAENAAREKTLEKLRLKEGKREGRAPMDKLQMKRLEEEVGSFRKVWAARKRQAMEAVECVADGAGKRVIDIIDMMGIETDEEAGV-SLPAL 425
DA++ +L+YM RPY NVF+N+H+ I K ++ +LD L + K +GK+KIY L P E A+ + K + E + S E + + + D L+ AL L E A EK +E L + GRAP+ + + L+ + FR W RKR AM+ + +ADG K+ ++D++G+ETDEEAGV +LP +
Sbjct: 109 DAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNL-PVPSEEERLAIAEQIKTISAECTASEQELKSAEATLSGITTQISDADLDAALKQLDEEAATLEKKVETL-----DQPGRAPVSPGRKEALKGKFTKFRTAWVQRKRIAMDGINQIADGMEKKPKAVLDLVGVETDEEAGVKALPTI 315 The following BLAST results are available for this feature:
BLAST of EWM24545.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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