EWM24554.1, cds6121 (CDS) Nannochloropsis gaditana

Overview
NameEWM24554.1
Unique Namecds6121
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:667305..668747 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24554.1
Productddb1- and cul4-associated factor 11 isoform 1
Orig transcript idgnl|cribi|Naga_100548g2.7181.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:667305..668747 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|585106066|gb|EWM24554.1| (ddb1- and cul4-associated factor 11 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 979.163 bits (2530), Expect = 0.000e+0
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query:    1 MHRNATGCGRRICSAMPTPSAPSSPSPQRRSSRLAAAAAATSTSPGRGVIAADSSSLWGSAGASEASSTSSCPPTSTCNSPAPACRYSPKASSPPFPFHSTPLSLALLSRSPTTRHGSLKVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDGDYRFATIWNEGGGRGGGGSGGGSIRWAITRFRRGGVIGLPGR 480
            MHRNATGCGRRICSAMPTPSAPSSPSPQRRSSRLAAAAAATSTSPGRGVIAADSSSLWGSAGASEASSTSSCPPTSTCNSPAPACRYSPKASSPPFPFHSTPLSLALLSRSPTTRHGSLKVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDGDYRFATIWNEGGGRGGGGSGGGSIRWAITRFRRGGVIGLPGR
Sbjct:    1 MHRNATGCGRRICSAMPTPSAPSSPSPQRRSSRLAAAAAATSTSPGRGVIAADSSSLWGSAGASEASSTSSCPPTSTCNSPAPACRYSPKASSPPFPFHSTPLSLALLSRSPTTRHGSLKVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDGDYRFATIWNEGGGRGGGGSGGGSIRWAITRFRRGGVIGLPGR 480          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|299471997|emb|CBN80080.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 201.445 bits (511), Expect = 3.373e-54
Identity = 120/302 (39.74%), Postives = 160/302 (52.98%), Query Frame = 0
Query:  149 GAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRET----EGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRT-ERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDGDYRFATI 445
            G  F PN     +   +  +F   FS  G +L TA QD  INLY  E +    A+    E     E  G T   F+ S       AP    P K I C    W+++ + FSPD KW+AYSSWS  +HL NT G +ELH+A+   P     FCLF++ FS     ++GGG+D  ++L  LERK       AH DDVN+V F D      +VLSG DD +IK+WDLR+ + A G L GH +GIT + +K        G GR+ +SN KDQT KLWD+R+M++   D   + A     DYR  T+
Sbjct:  201 GGSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESVYRWSAKSADPEENYRDEFPGFTRGMFRSSRRRLWHGAPK---PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARISAHDDDVNAVAFAD--SGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAK--------GDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMTM 489          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|390341256|ref|XP_781997.3| (PREDICTED: DDB1- and CUL4-associated factor 11 isoform X1 [Strongylocentrotus purpuratus])

HSP 1 Score: 187.193 bits (474), Expect = 1.213e-49
Identity = 113/343 (32.94%), Postives = 176/343 (51.31%), Query Frame = 0
Query:  101 TPLSLALLSRSPTTRHGSL--KVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLR-----TERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLR-----KMVEAGRDAEAR 431
            + L   +LSR+  T + +    V+   +L +   G  + R  S    +  G+ F PN     V+ F   +F  ++S DG +  +ACQD  I LY ++   + +                                    K+I  + VGW+I+ + FSPD  ++ YSSWS S+HL N +G  E H ++ +SP+   HFC FS+ FS DG++++ G NDG L++   E+   +   ++H+DDV++VCF D  Q+  ++ SG+DDG+ K+WD R      +R  G  AGH  GIT + SK        G GR+L++N KDQ+ KLWD+R      +VEA R A A+
Sbjct:   78 SDLKQEMLSRAGATHNATSLPNVNITRLLQKRQIGSCLRRGFSPNEQSQFGSVFLPNH-HRTVAHFPGKVFCGTYSMDGSVFLSACQDQNIRLYDVKNGYFKKF-----------------------------------KEIRARDVGWSILDTAFSPDGNFVIYSSWSHSIHLCNIYGEDETHNSLDLSPYTEGHFCAFSIRFSNDGSEILAGANDGCLYVYDREKNERTMRIESHEDDVSAVCFAD--QSSQILFSGADDGMCKVWDRRMLDGCNDRPIGTFAGHFDGITYIDSK--------GDGRHLITNSKDQSIKLWDMRCFSPSNVVEASRRAVAQ 374          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|780062158|ref|XP_011670539.1| (PREDICTED: DDB1- and CUL4-associated factor 11 isoform X2 [Strongylocentrotus purpuratus])

HSP 1 Score: 187.193 bits (474), Expect = 1.227e-49
Identity = 113/343 (32.94%), Postives = 176/343 (51.31%), Query Frame = 0
Query:  101 TPLSLALLSRSPTTRHGSL--KVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLR-----TERAHGLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLR-----KMVEAGRDAEAR 431
            + L   +LSR+  T + +    V+   +L +   G  + R  S    +  G+ F PN     V+ F   +F  ++S DG +  +ACQD  I LY ++   + +                                    K+I  + VGW+I+ + FSPD  ++ YSSWS S+HL N +G  E H ++ +SP+   HFC FS+ FS DG++++ G NDG L++   E+   +   ++H+DDV++VCF D  Q+  ++ SG+DDG+ K+WD R      +R  G  AGH  GIT + SK        G GR+L++N KDQ+ KLWD+R      +VEA R A A+
Sbjct:   77 SDLKQEMLSRAGATHNATSLPNVNITRLLQKRQIGSCLRRGFSPNEQSQFGSVFLPNH-HRTVAHFPGKVFCGTYSMDGSVFLSACQDQNIRLYDVKNGYFKKF-----------------------------------KEIRARDVGWSILDTAFSPDGNFVIYSSWSHSIHLCNIYGEDETHNSLDLSPYTEGHFCAFSIRFSNDGSEILAGANDGCLYVYDREKNERTMRIESHEDDVSAVCFAD--QSSQILFSGADDGMCKVWDRRMLDGCNDRPIGTFAGHFDGITYIDSK--------GDGRHLITNSKDQSIKLWDMRCFSPSNVVEASRRAVAQ 373          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|908505320|ref|XP_013063780.1| (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X2 [Biomphalaria glabrata])

HSP 1 Score: 181.415 bits (459), Expect = 1.121e-47
Identity = 122/376 (32.45%), Postives = 173/376 (46.01%), Query Frame = 0
Query:   78 CNSPAPACRYSP--KASSPPFPFHSTPLSLALLSRSPTTRHGSLKVSGNPMLWREAYGPRVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDG-DYRFATI 445
            C  P PA    P  KA      + S   S    +    T+        N +  RE  G +  ++ +        + F PN L   V+      F   +S DG +  +ACQD  I +Y                     T+ E F++                K I  + VGW+++ + FSPD ++ AYSSWS  +HL + +G H++HEA+   P   H FC+FSL FS+D  +++GG NDG L++  LE    +    AH DDVN+V F D  ++  ++ SG DDGL K+WD RT R       G LAGH  GIT + SK        G  R+ VSN KDQT KLWD+R   +     E +  V     DYR+  +
Sbjct:   37 CTKPPPAIETQPNVKALKESDIYSSIMQSSGRWTNKLWTKQYKSITIPNFIAQREL-GMKSQQQFTHGDMCVLNSKFLPNRLRKIVNYHHKKAFCGIYSEDGNVFLSACQDQNIRVYN--------------------TSNEEFKLI---------------KSIRARDVGWSVLDTAFSPDGRYAAYSSWSDCIHLCSIYGDHDVHEALHFDPG-DHSFCIFSLMFSSDNKEILGGANDGNLYVYDLESNKRTLKIDAHDDDVNTVRFAD--ESSQILYSGGDDGLCKVWDRRTLREERPVPVGTLAGHCDGITYIDSK--------GDARFFVSNSKDQTLKLWDIRCFSDQTGIEETKKVVSSQRWDYRWQQV 365          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|1169062344|ref|XP_020444003.1| (DDB1- and CUL4-associated factor 11 [Monopterus albus])

HSP 1 Score: 181.8 bits (460), Expect = 1.305e-47
Identity = 112/302 (37.09%), Postives = 154/302 (50.99%), Query Frame = 0
Query:  150 AHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAV-DLDGDYRFATI 445
             HF PN ++     ++   F   +S DG ML +ACQD  I LY                     TT   F +               Q+ +  + VGW+++  CF+PDA  + YSSWS  +HL + +G  E H A+ ++P     FC+FSLA S DG +++GG NDG L++  LE+   +    AH+DDVN+V F D   +  L+ SGSDD L K+WD RT R       G LAGH  GIT + SK        G  RYL+SN KDQ+ KLWD+RK       A +R AV   + DYR+  +
Sbjct:  167 THFLPNYVSHK-DTYQQKAFCGVYSEDGNMLLSACQDQNIRLYD--------------------TTRGRFNL---------------QRTVKARDVGWSVLDVCFTPDAHHVLYSSWSDYIHLCSIYGDSENHTALDLNPD-ERRFCVFSLAASTDGKEILGGANDGCLYVFDLEQNKRTLKIDAHEDDVNTVAFADS--SSQLLFSGSDDALCKVWDRRTLREDRPQPVGQLAGHRDGITFIHSK--------GDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQNWDYRWQQV 421          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|908505313|ref|XP_013063777.1| (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X1 [Biomphalaria glabrata] >gi|908505316|ref|XP_013063778.1| PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X1 [Biomphalaria glabrata])

HSP 1 Score: 181.415 bits (459), Expect = 2.107e-47
Identity = 108/303 (35.64%), Postives = 151/303 (49.83%), Query Frame = 0
Query:  149 GAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAVDLDG-DYRFATI 445
             + F PN L   V+      F   +S DG +  +ACQD  I +Y                     T+ E F++                K I  + VGW+++ + FSPD ++ AYSSWS  +HL + +G H++HEA+   P   H FC+FSL FS+D  +++GG NDG L++  LE    +    AH DDVN+V F D  ++  ++ SG DDGL K+WD RT R       G LAGH  GIT + SK        G  R+ VSN KDQT KLWD+R   +     E +  V     DYR+  +
Sbjct:  148 NSKFLPNRLRKIVNYHHKKAFCGIYSEDGNVFLSACQDQNIRVYN--------------------TSNEEFKLI---------------KSIRARDVGWSVLDTAFSPDGRYAAYSSWSDCIHLCSIYGDHDVHEALHFDPG-DHSFCIFSLMFSSDNKEILGGANDGNLYVYDLESNKRTLKIDAHDDDVNTVRFAD--ESSQILYSGGDDGLCKVWDRRTLREERPVPVGTLAGHCDGITYIDSK--------GDARFFVSNSKDQTLKLWDIRCFSDQTGIEETKKVVSSQRWDYRWQQV 404          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|919057785|ref|XP_013410755.1| (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X2 [Lingula anatina])

HSP 1 Score: 177.948 bits (450), Expect = 1.554e-46
Identity = 102/275 (37.09%), Postives = 141/275 (51.27%), Query Frame = 0
Query:  152 FYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKM 421
            + PN     V+ F S +F  ++S+DG +  +ACQD  I ++               +T  G  T                      K +  + VGW++V + FSPD  ++ YSSWS  +HL N  G HE+HEA+ + P   H FC FS+ FSAD  +++ G NDGGL++   E         AH+DDVNSV F D   +  ++ SG DDGL+K+WD RT         G LAGH  GIT + SK+          RYL+SN KDQ+ KLWD+RK 
Sbjct:   89 YLPNH-KDTVAQFHSKVFCGTYSQDGDIFLSACQDQNIRIF---------------DTSWGKFTL--------------------MKSVRARDVGWSVVDTAFSPDGNYLIYSSWSDCIHLCNIHGEHEVHEALHLFPDAGHSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADT--SSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSDGITFIDSKN--------DSRYLLSNSKDQSIKLWDMRKF 317          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|919057783|ref|XP_013410754.1| (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X1 [Lingula anatina])

HSP 1 Score: 178.718 bits (452), Expect = 3.126e-46
Identity = 102/277 (36.82%), Postives = 142/277 (51.26%), Query Frame = 0
Query:  150 AHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKM 421
            + + PN     V+ F S +F  ++S+DG +  +ACQD  I ++               +T  G  T                      K +  + VGW++V + FSPD  ++ YSSWS  +HL N  G HE+HEA+ + P   H FC FS+ FSAD  +++ G NDGGL++   E         AH+DDVNSV F D   +  ++ SG DDGL+K+WD RT         G LAGH  GIT + SK+          RYL+SN KDQ+ KLWD+RK 
Sbjct:  155 SKYLPNH-KDTVAQFHSKVFCGTYSQDGDIFLSACQDQNIRIF---------------DTSWGKFTL--------------------MKSVRARDVGWSVVDTAFSPDGNYLIYSSWSDCIHLCNIHGEHEVHEALHLFPDAGHSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADT--SSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSDGITFIDSKN--------DSRYLLSNSKDQSIKLWDMRKF 385          
BLAST of EWM24554.1 vs. NCBI_GenBank
Match: gi|1042322976|ref|XP_017309095.1| (PREDICTED: DDB1- and CUL4-associated factor 11 isoform X2 [Ictalurus punctatus])

HSP 1 Score: 178.333 bits (451), Expect = 3.278e-46
Identity = 110/302 (36.42%), Postives = 154/302 (50.99%), Query Frame = 0
Query:  150 AHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRETEGGGTTAEPFQVSASCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAH-----GLLAGHVSGITSVCSKDGGPGGGRGGGRYLVSNGKDQTTKLWDLRKMVEAGRDAEARYAV-DLDGDYRFATI 445
            +HF PN +A     ++   F   +S DG +  +ACQD  I LY               +T  G                    R L ++ +  + VGW+++  CF+PD++ + YSSWS  +HL +  G  E H A+ ++P     FC+FSLA S D  +V+GG NDG L++   E    +    AH+DDVN+V F D   +  L+ SGSDD L K+WD RT R H     G+LAGH  GIT + SK        G  RYL+SN KDQT KLWD+RK         +R+AV   + DYR+  +
Sbjct:  164 SHFLPNHVAHK-DTYQQKAFCGVYSNDGNLFLSACQDQNIRLY---------------DTSRG--------------------RFLLKRTVKARDVGWSVLDVCFTPDSRSVLYSSWSDYIHLCSIDGESETHTALDLNP-EERRFCVFSLAASIDSREVLGGANDGCLYVFDRELNKRTLKIDAHEDDVNAVAFADA--SSQLLFSGSDDALCKVWDRRTLREHSPQPVGVLAGHRDGITFIHSK--------GDARYLISNSKDQTIKLWDVRKFSPKEGLTASRHAVTQQNWDYRWQQV 418          
The following BLAST results are available for this feature:
BLAST of EWM24554.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106066|gb|EWM24554.1|0.000e+0100.00ddb1- and cul4-associated factor 11 isoform 1 [Nan... [more]
gi|299471997|emb|CBN80080.1|3.373e-5439.74conserved unknown protein [Ectocarpus siliculosus][more]
gi|390341256|ref|XP_781997.3|1.213e-4932.94PREDICTED: DDB1- and CUL4-associated factor 11 iso... [more]
gi|780062158|ref|XP_011670539.1|1.227e-4932.94PREDICTED: DDB1- and CUL4-associated factor 11 iso... [more]
gi|908505320|ref|XP_013063780.1|1.121e-4732.45PREDICTED: DDB1- and CUL4-associated factor 11-lik... [more]
gi|1169062344|ref|XP_020444003.1|1.305e-4737.09DDB1- and CUL4-associated factor 11 [Monopterus al... [more]
gi|908505313|ref|XP_013063777.1|2.107e-4735.64PREDICTED: DDB1- and CUL4-associated factor 11-lik... [more]
gi|919057785|ref|XP_013410755.1|1.554e-4637.09PREDICTED: DDB1- and CUL4-associated factor 11-lik... [more]
gi|919057783|ref|XP_013410754.1|3.126e-4636.82PREDICTED: DDB1- and CUL4-associated factor 11-lik... [more]
gi|1042322976|ref|XP_017309095.1|3.278e-4636.42PREDICTED: DDB1- and CUL4-associated factor 11 iso... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6136rna6136Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications