EWM24555.1, cds6118 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|585106069|gb|EWM24555.1| (protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0 Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query: 1 MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY
Sbjct: 1 MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|553176477|ref|XP_005852379.1| (protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422296149|gb|EKU23448.1| protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 268/270 (99.26%), Postives = 268/270 (99.26%), Query Frame = 0
Query: 119 TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG 388
TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGS ASETLMLAPDLPFHGQTRVIPDDGDMSM RLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG
Sbjct: 1 TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSVASETLMLAPDLPFHGQTRVIPDDGDMSMVRLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG 270
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|929234131|ref|XP_013993061.1| (PREDICTED: protein phosphatase methylesterase 1 isoform X2 [Salmo salar]) HSP 1 Score: 111.309 bits (277), Expect = 1.963e-23 Identity = 82/251 (32.67%), Postives = 126/251 (50.20%), Query Frame = 0
Query: 202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGE-----GGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
VL+ LHG GH+++SW + + + ++A DL HG T+V D D+S + K++ G+ +A G P ++ +GHS+GGA A+H A + S+ GLCV+D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q++K EE G + + ++ + G K + D+ E + E Y W DL ++E+Y
Sbjct: 73 VLLLLHGGGHSALSWAVFTAVIYNRINCR-----VVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNVESARVSMGGQVKKC------EEPLNSPGVSKSISDGIIEEEEEEEEEEGESNHKRKKEDDQEVKKETLYTWQIDLSKTEKY 294
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|213514868|ref|NP_001133685.1| (protein phosphatase methylesterase 1 [Salmo salar] >gi|209154928|gb|ACI33696.1| phosphatase methylesterase 1 [Salmo salar]) HSP 1 Score: 110.923 bits (276), Expect = 2.494e-23 Identity = 84/250 (33.60%), Postives = 129/250 (51.60%), Query Frame = 0
Query: 202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
VL+ LHG GH+++SW + +++ S + ++A DL HG T+V D D+S + K++ G+ +A G P ++ +GHS+GGA A+H A + S+ GLCV+D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q++K EE G + E ++ + G K + D+ E + E Y W DL ++E+Y
Sbjct: 73 VLLLLHGGGHSALSWAV----FTEVIYSRIN-CRVVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNIESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEEGESNQKRKKEDDQEVKKESLYTWQIDLSKTEKY 293
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|699606485|ref|XP_009871970.1| (PREDICTED: protein phosphatase methylesterase 1, partial [Apaloderma vittatum]) HSP 1 Score: 108.612 bits (270), Expect = 2.536e-23 Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
E VL+ LHG GH+++SW + + + + ++A DL HG+T+V + D+S + K++ G +A G P ++ +GHS+GGA A+H A + S+ GLC++D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q+++ G E + G E ++ + G +K + D+ E + E Y W +L ++E+Y
Sbjct: 9 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELSKTEKY 234
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|225709200|gb|ACO10446.1| (phosphatase methylesterase 1 [Caligus rogercresseyi]) HSP 1 Score: 110.923 bits (276), Expect = 2.750e-23 Identity = 84/250 (33.60%), Postives = 129/250 (51.60%), Query Frame = 0
Query: 202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
VL+ LHG GH+++SW + +++ S + ++A DL HG T+V D D+S + K++ G+ +A G P ++ +GHS+GGA A+H A + S+ GLCV+D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q++K EE G + E ++ + G K + D+ E + E Y W DL ++E+Y
Sbjct: 73 VLLLLHGGGHSALSWAV----FTEVIYSRIN-CRVVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---FGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNIESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEEGESNQKRKKEDDQEVKKESLYTWQIDLSKTEKY 293
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|677295625|gb|KFP78053.1| (Protein phosphatase methylesterase 1, partial [Apaloderma vittatum]) HSP 1 Score: 108.227 bits (269), Expect = 2.984e-23 Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
E VL+ LHG GH+++SW + + + + ++A DL HG+T+V + D+S + K++ G +A G P ++ +GHS+GGA A+H A + S+ GLC++D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q+++ G E + G E ++ + G +K + D+ E + E Y W +L ++E+Y
Sbjct: 10 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELSKTEKY 235
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|695143901|ref|XP_009499260.1| (PREDICTED: protein phosphatase methylesterase 1, partial [Phalacrocorax carbo]) HSP 1 Score: 108.227 bits (269), Expect = 3.255e-23 Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
E VL+ LHG GH+++SW + + + + ++A DL HG+T+V + D+S + K++ G +A G P ++ +GHS+GGA A+H A + S+ GLC++D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q+++ G E + G E ++ + G +K + D+ E + E Y W +L ++E+Y
Sbjct: 9 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELAKTEKY 234
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|679242765|gb|KFW96128.1| (Protein phosphatase methylesterase 1, partial [Phalacrocorax carbo]) HSP 1 Score: 107.842 bits (268), Expect = 3.947e-23 Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
E VL+ LHG GH+++SW + + + + ++A DL HG+T+V + D+S + K++ G +A G P ++ +GHS+GGA A+H A + S+ GLC++D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q+++ G E + G E ++ + G +K + D+ E + E Y W +L ++E+Y
Sbjct: 10 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELAKTEKY 235
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|1211240067|ref|XP_021473991.1| (protein phosphatase methylesterase 1-like [Oncorhynchus mykiss]) HSP 1 Score: 110.538 bits (275), Expect = 4.141e-23 Identity = 83/250 (33.20%), Postives = 126/250 (50.40%), Query Frame = 0
Query: 202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
VL+ LHG GH+++SW + + + ++A DL HG T+V D D+S + K++ G+ +A G P ++ +GHS+GGA A+H A + S+ GLCV+D+VEG AM +L M ++ P F S+E AIEWSV +GQ IRN ESA VS+ Q++K EE G + E ++ + G K + D+ E + E Y W DL ++E+Y
Sbjct: 73 VLLLLHGGGHSALSWAVFTEVIYNRINCR-----VVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNVESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEDGESNHKRKKEDDQEVKKESLYTWQIDLSKTEKY 293 The following BLAST results are available for this feature:
BLAST of EWM24555.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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