EWM24555.1, cds6118 (CDS) Nannochloropsis gaditana

Overview
NameEWM24555.1
Unique Namecds6118
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:660618..661959 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24555.1
Productprotein phosphatase methylesterase 1
Partialtrue
Orig transcript idgnl|cribi|Naga_100140g1.4479.mrna
GbkeyCDS
End range.
End range661959
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:660618..661959 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0052689carboxylic ester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006482protein demethylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR016812PPase_methylesterase_euk
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Homology
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|585106069|gb|EWM24555.1| (protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana])

HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query:    1 MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY
Sbjct:    1 MTKSHSIKKYQVCHGFVLLCDWLASHRQVKLPAQRYYNLNYTQKANTAKAILAACYLFTWLAVPNMWLQTMTVVPSAYCHRDSEFVFVLATFGALTAAEKRNPITCTHVGPPFDASVPTPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|553176477|ref|XP_005852379.1| (protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422296149|gb|EKU23448.1| protein phosphatase methylesterase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 268/270 (99.26%), Postives = 268/270 (99.26%), Query Frame = 0
Query:  119 TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG 388
            TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGS ASETLMLAPDLPFHGQTRVIPDDGDMSM RLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG
Sbjct:    1 TPGSVQMPIAQVPVPSGWQQAQVLVPSTGSSFCVSYAGGNLLSSTASGTHKKQETAEGRRPSGEHTDGDLDDDSDADATGEETVLVFLHGAGHTSMSWTLPCLELGKLLGSVASETLMLAPDLPFHGQTRVIPDDGDMSMVRLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGG 270          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|929234131|ref|XP_013993061.1| (PREDICTED: protein phosphatase methylesterase 1 isoform X2 [Salmo salar])

HSP 1 Score: 111.309 bits (277), Expect = 1.963e-23
Identity = 82/251 (32.67%), Postives = 126/251 (50.20%), Query Frame = 0
Query:  202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGE-----GGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            VL+ LHG GH+++SW +    +   +        ++A DL  HG T+V   D D+S   + K++             G+  +A  G  P  ++ +GHS+GGA A+H A    + S+    GLCV+D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q++K       EE     G  +   +       ++ +  G    K +  D+ E + E  Y W  DL ++E+Y
Sbjct:   73 VLLLLHGGGHSALSWAVFTAVIYNRINCR-----VVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNVESARVSMGGQVKKC------EEPLNSPGVSKSISDGIIEEEEEEEEEEGESNHKRKKEDDQEVKKETLYTWQIDLSKTEKY 294          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|213514868|ref|NP_001133685.1| (protein phosphatase methylesterase 1 [Salmo salar] >gi|209154928|gb|ACI33696.1| phosphatase methylesterase 1 [Salmo salar])

HSP 1 Score: 110.923 bits (276), Expect = 2.494e-23
Identity = 84/250 (33.60%), Postives = 129/250 (51.60%), Query Frame = 0
Query:  202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            VL+ LHG GH+++SW +      +++ S  +   ++A DL  HG T+V   D D+S   + K++             G+  +A  G  P  ++ +GHS+GGA A+H A    + S+    GLCV+D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q++K       EE     G  +       E  ++ +  G    K +  D+ E + E  Y W  DL ++E+Y
Sbjct:   73 VLLLLHGGGHSALSWAV----FTEVIYSRIN-CRVVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNIESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEEGESNQKRKKEDDQEVKKESLYTWQIDLSKTEKY 293          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|699606485|ref|XP_009871970.1| (PREDICTED: protein phosphatase methylesterase 1, partial [Apaloderma vittatum])

HSP 1 Score: 108.612 bits (270), Expect = 2.536e-23
Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query:  199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            E  VL+ LHG GH+++SW +    +   +     +  ++A DL  HG+T+V  +  D+S   + K++             G   +A  G  P  ++ +GHS+GGA A+H A    + S+    GLC++D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q+++  G    E  +    G     E  ++ +  G   +K +  D+ E + E  Y W  +L ++E+Y
Sbjct:    9 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELSKTEKY 234          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|225709200|gb|ACO10446.1| (phosphatase methylesterase 1 [Caligus rogercresseyi])

HSP 1 Score: 110.923 bits (276), Expect = 2.750e-23
Identity = 84/250 (33.60%), Postives = 129/250 (51.60%), Query Frame = 0
Query:  202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            VL+ LHG GH+++SW +      +++ S  +   ++A DL  HG T+V   D D+S   + K++             G+  +A  G  P  ++ +GHS+GGA A+H A    + S+    GLCV+D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q++K       EE     G  +       E  ++ +  G    K +  D+ E + E  Y W  DL ++E+Y
Sbjct:   73 VLLLLHGGGHSALSWAV----FTEVIYSRIN-CRVVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---FGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNIESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEEGESNQKRKKEDDQEVKKESLYTWQIDLSKTEKY 293          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|677295625|gb|KFP78053.1| (Protein phosphatase methylesterase 1, partial [Apaloderma vittatum])

HSP 1 Score: 108.227 bits (269), Expect = 2.984e-23
Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query:  199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            E  VL+ LHG GH+++SW +    +   +     +  ++A DL  HG+T+V  +  D+S   + K++             G   +A  G  P  ++ +GHS+GGA A+H A    + S+    GLC++D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q+++  G    E  +    G     E  ++ +  G   +K +  D+ E + E  Y W  +L ++E+Y
Sbjct:   10 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELSKTEKY 235          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|695143901|ref|XP_009499260.1| (PREDICTED: protein phosphatase methylesterase 1, partial [Phalacrocorax carbo])

HSP 1 Score: 108.227 bits (269), Expect = 3.255e-23
Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query:  199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            E  VL+ LHG GH+++SW +    +   +     +  ++A DL  HG+T+V  +  D+S   + K++             G   +A  G  P  ++ +GHS+GGA A+H A    + S+    GLC++D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q+++  G    E  +    G     E  ++ +  G   +K +  D+ E + E  Y W  +L ++E+Y
Sbjct:    9 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELAKTEKY 234          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|679242765|gb|KFW96128.1| (Protein phosphatase methylesterase 1, partial [Phalacrocorax carbo])

HSP 1 Score: 107.842 bits (268), Expect = 3.947e-23
Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0
Query:  199 EETVLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREGGGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            E  VL+ LHG GH+++SW +    +   +     +  ++A DL  HG+T+V  +  D+S   + K++             G   +A  G  P  ++ +GHS+GGA A+H A    + S+    GLC++D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q+++  G    E  +    G     E  ++ +  G   +K +  D+ E + E  Y W  +L ++E+Y
Sbjct:   10 EGPVLLLLHGGGHSALSWAVFTSAIINRI-----QCRIVALDLRGHGETKV-RNPEDLSAETMSKDV-------------GNVVEALYGDLPPPIMLIGHSMGGAIAVHTAVANLVPSL---LGLCMIDVVEGTAMDALNSMQNFLRSRPKTFKSLENAIEWSVKSGQ-IRNLESARVSMVGQVKQCEGAASPECPKAIVEGIIEEEEEEEEDEEGGGSVNKRKKEDDTETKKEHLYTWRIELAKTEKY 235          
BLAST of EWM24555.1 vs. NCBI_GenBank
Match: gi|1211240067|ref|XP_021473991.1| (protein phosphatase methylesterase 1-like [Oncorhynchus mykiss])

HSP 1 Score: 110.538 bits (275), Expect = 4.141e-23
Identity = 83/250 (33.20%), Postives = 126/250 (50.40%), Query Frame = 0
Query:  202 VLVFLHGAGHTSMSWTLPCLELGKLLGSAASETLMLAPDLPFHGQTRVIPDDGDMSMARLVKELLGCLQAWFDLGGRGRAGDAGVGRKPRNMVFVGHSLGGACAIHLARDPGLASIGRVRGLCVVDMVEGAAMQSLGHMHERVQKVPARFDSIEAAIEWSVGAGQMIRNEESAAVSVPAQLRKVTGGRRREEGRGGEGGREG----GGEGGKDFQVAGMGEDKGRPLDEGEGEVEEYYEWITDLRESERY 447
            VL+ LHG GH+++SW +    +   +        ++A DL  HG T+V   D D+S   + K++             G+  +A  G  P  ++ +GHS+GGA A+H A    + S+    GLCV+D+VEG AM +L  M   ++  P  F S+E AIEWSV +GQ IRN ESA VS+  Q++K       EE     G  +       E  ++ +  G    K +  D+ E + E  Y W  DL ++E+Y
Sbjct:   73 VLLLLHGGGHSALSWAVFTEVIYNRINCR-----VVAMDLRAHGDTKVKNSD-DLSAETMAKDI-------------GKVVEALYGENPPPIMMIGHSMGGAIAVHTAAANHVPSL---LGLCVIDVVEGTAMDALNSMQNFLRSRPKTFKSVENAIEWSVKSGQ-IRNVESARVSMGGQVKKC------EEPLNSPGVSKSIGEVIIEEEEEEEEDGESNHKRKKEDDQEVKKESLYTWQIDLSKTEKY 293          
The following BLAST results are available for this feature:
BLAST of EWM24555.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106069|gb|EWM24555.1|0.000e+0100.00protein phosphatase methylesterase 1, partial [Nan... [more]
gi|553176477|ref|XP_005852379.1|0.000e+099.26protein phosphatase methylesterase 1, partial [Nan... [more]
gi|929234131|ref|XP_013993061.1|1.963e-2332.67PREDICTED: protein phosphatase methylesterase 1 is... [more]
gi|213514868|ref|NP_001133685.1|2.494e-2333.60protein phosphatase methylesterase 1 [Salmo salar]... [more]
gi|699606485|ref|XP_009871970.1|2.536e-2332.13PREDICTED: protein phosphatase methylesterase 1, p... [more]
gi|225709200|gb|ACO10446.1|2.750e-2333.60phosphatase methylesterase 1 [Caligus rogercressey... [more]
gi|677295625|gb|KFP78053.1|2.984e-2332.13Protein phosphatase methylesterase 1, partial [Apa... [more]
gi|695143901|ref|XP_009499260.1|3.255e-2332.13PREDICTED: protein phosphatase methylesterase 1, p... [more]
gi|679242765|gb|KFW96128.1|3.947e-2332.13Protein phosphatase methylesterase 1, partial [Pha... [more]
gi|1211240067|ref|XP_021473991.1|4.141e-2333.20protein phosphatase methylesterase 1-like [Oncorhy... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6133rna6133Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications