EWM30061.1, cds611 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|585112693|gb|EWM30061.1| (hypothetical protein Naga_100170g6 [Nannochloropsis gaditana]) HSP 1 Score: 388.652 bits (997), Expect = 1.078e-136 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MCEKGICVALTPISLSPFVTVDKLVPTDFFGSATSSMSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 193
MCEKGICVALTPISLSPFVTVDKLVPTDFFGSATSSMSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA
Sbjct: 1 MCEKGICVALTPISLSPFVTVDKLVPTDFFGSATSSMSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 193
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|553185855|ref|XP_005854322.1| (hypothetical protein NGA_0208701 [Nannochloropsis gaditana CCMP526] >gi|553188713|ref|XP_005854850.1| hypothetical protein NGA_0208702 [Nannochloropsis gaditana CCMP526] >gi|422294204|gb|EKU21504.1| hypothetical protein NGA_0208702 [Nannochloropsis gaditana CCMP526] >gi|422294737|gb|EKU22037.1| hypothetical protein NGA_0208701 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.849 bits (808), Expect = 2.456e-108 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 37 MSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 193
MSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA
Sbjct: 1 MSIFDDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 157
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|585101683|gb|EWM21453.1| (hypothetical protein Naga_100019g4 [Nannochloropsis gaditana]) HSP 1 Score: 109.383 bits (272), Expect = 1.147e-26 Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 41 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 193
DDK +++ WY +S+AYV+ A+ A+ ET FAAIWSML+L I+IGGT+ R++TP+ATGV LG M+SQ++L+LF IF ++ + E+ + A A FAFFL +++ VFS+ L +R Y+ + + +SYA
Sbjct: 37 DDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA 189
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|298710050|emb|CBJ31767.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.3218 bits (168), Expect = 9.096e-12 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 85 AFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQ 178
FAA+W++L+L+ + +GG+LV + +T +A G LG + SQ L+LF +F + A EK A +A A F FFL +++ F+ L ++R+
Sbjct: 25 GFAAVWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVIIMSQTMLVLFAVFAGRASTAEDVDEKPADRAFAAFCFFLWIVYSTFAGMLAVFRE 118
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|673033292|ref|XP_008870607.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574473469|gb|ETW00472.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 63.1586 bits (152), Expect = 6.161e-9 Identity = 40/141 (28.37%), Postives = 75/141 (53.19%), Query Frame = 0
Query: 51 WYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTI--------FEAHSRDAVTASEKS------AGQATATFAFFLAVIFGVFSIFLLMWR 177
W+T + ++ + + A+V A+ + + P ++ FA IW M +++A+ IGGT+V + QTP+A G +G M S L +F++ + A + T SE + +A+A F+FF+ V++ F++ L+ R
Sbjct: 26 WFTILFFAMMFSLGAIVFAAN-NNGDGPQFSKSLGFAGIWMMFLVIALSIGGTMVLRKYQTPIAIGFFIGVVIMMS---LNMFSLSVLCAGAAYLAKRSNNGTLSENGWKGPVHSDEASAVFSFFMFVLYFAFAVVLVKHR 162
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|673033290|ref|XP_008870606.1| (hypothetical protein H310_07089 [Aphanomyces invadans] >gi|574473468|gb|ETW00471.1| hypothetical protein H310_07089 [Aphanomyces invadans]) HSP 1 Score: 63.1586 bits (152), Expect = 8.139e-9 Identity = 40/141 (28.37%), Postives = 75/141 (53.19%), Query Frame = 0
Query: 51 WYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTI--------FEAHSRDAVTASEKS------AGQATATFAFFLAVIFGVFSIFLLMWR 177
W+T + ++ + + A+V A+ + + P ++ FA IW M +++A+ IGGT+V + QTP+A G +G M S L +F++ + A + T SE + +A+A F+FF+ V++ F++ L+ R
Sbjct: 51 WFTILFFAMMFSLGAIVFAAN-NNGDGPQFSKSLGFAGIWMMFLVIALSIGGTMVLRKYQTPIAIGFFIGVVIMMS---LNMFSLSVLCAGAAYLAKRSNNGTLSENGWKGPVHSDEASAVFSFFMFVLYFAFAVVLVKHR 187
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|325189148|emb|CCA23673.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 62.3882 bits (150), Expect = 3.035e-8 Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = 0
Query: 41 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIF--------EAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWR 177
++ L+ W++ + V Y I A+V A+ + ++ FA IW+M++++ + +GGTLV + QTP+A G +G M S L +F E + T + QA A F+FF+ ++ +F L+ R
Sbjct: 106 ENPRLLVTYLWFSTLVVGFMYAITAIV-AAVYNNGHNLSDSKSLGFAGIWTMILMIGLSVGGTLVMRKYQTPLAVGFFIGVVIMMSFQMFSLTILFVGGSYLAKEERTLFNNTDTNIHTNQAAAVFSFFMFALYAIFGAVLVKHR 249
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|325190846|emb|CCA25334.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 62.003 bits (149), Expect = 3.163e-8 Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = 0
Query: 41 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIF--------EAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWR 177
++ L+ W++ + V Y I A+V A+ + ++ FA IW+M++++ + +GGTLV + QTP+A G +G M S L +F E + T + QA A F+FF+ ++ +F L+ R
Sbjct: 96 ENPRLLVTYLWFSTLVVGFMYAITAIV-AAVYNNGHNLSDSKSLGFAGIWTMILMIGLSVGGTLVMRKYQTPLAVGFFIGVVIMMSFQMFSLTILFVGGSYLAKEERTLFNNTDTNIHTNQAAAVFSFFMFALYAIFGAVLVKHR 239
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|635370030|emb|CCI41851.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 60.8474 bits (146), Expect = 4.057e-8 Identity = 39/145 (26.90%), Postives = 73/145 (50.34%), Query Frame = 0
Query: 41 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAM--FSQIELMLFTIFEAH-SRDAVTASEKS-----AGQATATFAFFLAVIFGVFSIFLLMWR 177
++ L+ W++ + V Y I A+V A S ++ FA IW+M++++ + +GGTLV + QTP+A G +G M F L + + E++ +++ T K+ +A A F+FF+ ++ +F L+ R
Sbjct: 17 ENPRLLVTYLWFSTLVVGFMYAITAIVAAVENSGRNLS-DSKSLGFAGIWAMILMIGLSVGGTLVMRKFQTPLAVGFFIGVVIMMSFQMFSLTVLFVGESYLAKEERTLFNKTDTNIHTNEAAAVFSFFMFTLYAIFGAVLVKHR 160
BLAST of EWM30061.1 vs. NCBI_GenBank
Match: gi|298710920|emb|CBJ49273.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 59.6918 bits (143), Expect = 9.653e-8 Identity = 28/95 (29.47%), Postives = 53/95 (55.79%), Query Frame = 0
Query: 42 DKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIF 136
+ +++ +WY + + V+ AL+ AS S + +FA++W++ ++L + + GT++ + TP+A G LLG T M SQ +LF +F
Sbjct: 20 NPSKVVSYSWYLVLIFAAVDVLVALINASTNDSSAN--GSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVF 112 The following BLAST results are available for this feature:
BLAST of EWM30061.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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