EWM24563.1, cds6109 (CDS) Nannochloropsis gaditana

Overview
NameEWM24563.1
Unique Namecds6109
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:628450..630324 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24563.1
Productelongation factor tu
Orig transcript idgnl|cribi|Naga_100140g12.4487.mrna
GeneSup35
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:628450..630324 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR031157G_TR_CS
IPR004161Transl_elong_EFTu/EF1A_2
IPR027417P-loop_NTPase
IPR004160Transl_elong_EFTu/EF1A_C
IPR000795TF_GTP-bd_dom
Homology
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|585106077|gb|EWM24563.1| (elongation factor tu [Nannochloropsis gaditana])

HSP 1 Score: 1288.09 bits (3332), Expect = 0.000e+0
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0
Query:    1 MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN 624
            MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN
Sbjct:    1 MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN 624          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|298711946|emb|CBJ48633.1| (Sup35, eukaryotic translation termination factor eRF3 [Ectocarpus siliculosus])

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 330/557 (59.25%), Postives = 409/557 (73.43%), Query Frame = 0
Query:   72 DENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEED---------VQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLK-SCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
            DENDPLW+A  ++A GDR K  KMLEDPD+LM  PE+  ++  G    +  +         + +E   P +A      G  G+   A           GG+++           DEDPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRAHF+T+ KRYTI+DAPGH  YVPNMI GAVQADVGILVISAR+GEFETGF+RGGQTREHALLAKTLGVRYLVVVINKMDD TV+W+KERFDECV+K++PFL+  CGYA KK+VKFIP+SGL+G N+++ VA   CPWW  + ++G++NT+E TL+  LD LH+D R +   LR+PVLDRY+DRGT+ LGKVE G++  G ++++MP     +V  I I D  V+SAKPGENV VK+  +   DV +GFVLC+  +PCHAAT F  Q+ALV+L E RPIF+ GY+ + H HT EEE TVVE+LS+  RK    K+R RFA++G ++TA  +  R +C E+F+E+P LGR TLR EGKTIAIGKIL V
Sbjct:  118 DENDPLWKATLQVANGDRAKALKMLEDPDALMANPEVNKIIAEGAASGDAAL---------EVVEGQYPEQAGGGVAAGGEGEGKAARGERRKGGDNYGGKKEEKEEVVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTECKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWAKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVANDLCPWWGPMIKAGDNNTSEGTLLELLDKLHMDDRHADRPLRVPVLDRYNDRGTMVLGKVEQGTLTEGTQISLMPTGQVSKVDSIFIKDERVKSAKPGENVTVKVVCSD-SDVMRGFVLCSTVQPCHAATLFVAQIALVELTEQRPIFTAGYDAMCHCHTCEEECTVVEILSVVDRKT-GAKKRQRFAKEGAMVTAKFKVDRSMCMESFEEMPHLGRFTLRTEGKTIAIGKILAV 663          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|676382681|ref|XP_009034619.1| (hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens] >gi|323455196|gb|EGB11065.1| hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens])

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 290/445 (65.17%), Postives = 358/445 (80.45%), Query Frame = 0
Query:  179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIND-LPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESR---KPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
            DPREHLN+VFIGHVDAGKST+SG +LYLTG VDKRTIE++E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRA FET+ KRYTI+DAPGHK+YVP+MI+GA QADVGILVISARRGEFETGFERGGQTREHA+L KTLGVR+L+VVINKMDD TVQW KER+DECVSKLKPFLK+CG+  +K+VKF+P+SGL G N+   V A+ CPWW+    +G+HNT + TLI CLD L I+GR + + +RIPVLDR+++RGT+ +GKVESG +  G K+T+MP K + +V+ + +N+  PV SAKPGENV  K+ GA +E++ KGFVLC+A   C A  +F CQLALV+LLEHRPIF+ GY C++H HT E EVT  +LLS + ++   KP    R   FA+QG V+ A L     +C E F+++ QLGR TLRDEGK+IAIGKI+ +
Sbjct:   45 DPREHLNVVFIGHVDAGKSTLSGNMLYLTGFVDKRTIEKYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAPFETEVKRYTILDAPGHKSYVPHMISGAAQADVGILVISARRGEFETGFERGGQTREHAMLCKTLGVRFLLVVINKMDDPTVQWKKERYDECVSKLKPFLKTCGFIIRKEVKFMPISGLVGSNVLNQVDAAVCPWWQACVDAGDHNTTDATLIGCLDKLTIEGRSAESPVRIPVLDRFYERGTMVMGKVESGRIAKGMKLTIMPTKQEVKVEQVYVNETTPVFSAKPGENVSFKVSGAAIEEICKGFVLCSA-PVCRAVNKFTCQLALVELLEHRPIFTSGYTCMLHAHTCETEVTCSKLLSQVNAKVKPKPGAPPRPICFAKQGAVVIAQLSVPETICLEVFEDMNQLGRFTLRDEGKSIAIGKIISL 488          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1210515792|dbj|GAX25315.1| (peptide chain release factor subunit 3 [Fistulifera solaris])

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 317/601 (52.75%), Postives = 413/601 (68.72%), Query Frame = 0
Query:   25 FNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAV---DKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIN-DLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPE-EVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
             NP A  + P  AA+  T           +  PAP+ NA    + N +  DE DPLWQAV K++ GDREK  K++ +PD L  YPEI+ +L        E+ GG A   +   + +D   +A    +     ++  APA            + V++ DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+E+EAK LNR+SWFLAFIMDT+E ERAKGKTVEVG+A FET+ KRYTIMDAPGHKNYVPNMI GA QAD+GILVISAR+GEFETGF+RGGQTREHALLAKTLGV YL+V +NKMD+ TV+WSKERF+EC+SK++P+LKSCG+  K  VKFIP+SGL G N++  V+ S C WW+  Y +G++NT +PTL   LD+L I GRD+TA +RIPVLDRY +RGTIA+GKVESG++R G KVTVMP    ++V  + +N D  + +A+PGE+V VKL GA +ED++KG+VLC+   PC A  +  CQ+A++D+ ++  I + G+ CV H HT EEE T+  +   E+  P+ +V +  RFA  G      +  ++    + +  +  LGR TLR EGKTIAIGKI K+ P
Sbjct:    1 MNPQATEWKPSVAAAPWT-------PGGGVSVPAPTPNAAPEPESNEDEIDEQDPLWQAVLKISDGDREKALKLINNPDELAAYPEIQKIL--------EETGGDAAEDEESELVQDVEEKAKIEDSMEDEAESE-APA------------KPVKEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEREAKALNRDSWFLAFIMDTDEGERAKGKTVEVGKARFETENKRYTIMDAPGHKNYVPNMIQGASQADIGILVISARKGEFETGFDRGGQTREHALLAKTLGVDYLIVAVNKMDEPTVKWSKERFEECISKIRPYLKSCGFTIKTQVKFIPISGLGGANVKDEVSESECSWWKEFYTTGQNNTDQPTLFKLLDSLIIPGRDATAPVRIPVLDRYSERGTIAMGKVESGTLRPGSKVTVMPTGMTYKVDEVWVNDDESIAAARPGESVLVKLNGARLEDIRKGYVLCS-DPPCRAVDKLICQVAIMDMPDNTKIMTAGFQCVFHAHTCEEECTITRIF--ETTNPKGQVMKGARFAGIGMRAIVMIELSQSTPLDTYDNMHFLGRFTLRTEGKTIAIGKITKLPP 570          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1072224718|gb|OEU09467.1| (GTP_EFTU-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0
Identity = 281/455 (61.76%), Postives = 348/455 (76.48%), Query Frame = 0
Query:  172 EEDVQDE------DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
            EEDV+D       DPREHLNLVFIGHVDAGKST+SG +LY+   VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+AHFET+ KRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVVV+NKMDD TV WSKERFDECV KL+PFLK CGY  K +VKFIPVSGL G N++  V +S C WW+  ++SGE+NT+ PTL+S  D+L I GR++TA LRIP+LDRY DRGTIA+GKVESG +R G KVT+MP + +++V  +  N+ PV +A+PGENV +KL GAG EDV+KGFV+CT+   C +  +  C++ +V++ E+  I + G+  + H H  EEE T++++   E+    +  +  RFA         +  A+ V  E + + P LGR TLR EGKTIAIGKI K+ P
Sbjct:    2 EEDVEDVVAIKEGDPREHLNLVFIGHVDAGKSTLSGSILYILDYVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAHFETEAKRYTILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKGCGYTIKTEVKFIPVSGLVGSNVKDEVDSSICSWWKNSWESGENNTSAPTLLSLFDSLEISGRNATAPLRIPILDRYTDRGTIAMGKVESGVIRPGMKVTLMPTRAEYKVDAVWANEDPVAAARPGENVLIKLAGAGTEDVRKGFVMCTS-PACRSVAKIICEIYVVEMPENTRIMTAGFQAMFHAHCCEEECTILKIF--ETTNKGKTLKGARFAGVNMTAVCMIELAQTVPVETYDDYPFLGRFTLRSEGKTIAIGKIQKLPP 453          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|219116514|ref|XP_002179052.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409819|gb|EEC49750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0
Identity = 281/442 (63.57%), Postives = 341/442 (77.15%), Query Frame = 0
Query:  179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
            DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+A FETD KRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVV +NKMD+ TVQW KERFDECV+K++PFLKSCG+  K++VKFIP+SGL+G N++  VA S C WW+  Y S E+NT+ PTL+S LD L I GRD  A LRIPVLDRY DRG I++GKVESG +R G KVT+MP + +++V  +  N+ PV  A+PGENV VKL GA +EDV+KGFV+CT   PC A  +  CQ+A+ D+ ++ PI + G+ C+ H HT EEE TV ++    + K   VK   R+   G      L  A+ V  E ++ +  +GR TLR EGKT+AIGKI K+ P
Sbjct:    5 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAQFETDLKRYTILDAPGHKNYVPNMIQGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVAVNKMDEPTVQWKKERFDECVTKIRPFLKSCGFVIKREVKFIPISGLSGANVKDEVALSECSWWKEYYTSNENNTSAPTLLSLLDTLEIAGRDPEAPLRIPVLDRYTDRGIISMGKVESGIIRPGMKVTIMPTRNKYKVDEVWANEDPVSGARPGENVLVKLNGAKMEDVRKGFVICT-DPPCRAVDKIICQIAVADMPDNTPIMTAGFQCMFHAHTTEEECTVAKIFETTNAKGVVVK-GARYVGVGMRAIVMLDLAQTVPLETYEHMAFMGRFTLRTEGKTVAIGKITKLPP 444          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1210524293|dbj|GAX17022.1| (hypothetical protein FisN_5Hh406 [Fistulifera solaris])

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 295/543 (54.33%), Postives = 374/543 (68.88%), Query Frame = 0
Query:   25 FNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALL---GGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIN-DLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEE 563
             NP A  + P  AA+  T           +  PAP   A + N +  DENDPLWQAV K++ GDREK  K++ +PD L  YPEI+ +L   GG     EE V    E    +   +DE           A  +A   P               V++ DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+E+EAK LNR+SWFLAFIMDT+E ERAKGKTVEVG+A FET+ KRYTIMDAPGHKN+VPNMI GA QAD+GILVISAR+GEFETGF+RGGQTREHALLAKTLGV YL+V +NKMD+ TV+WSKERF+EC+SK++P+LKSCG+  K  VKFIP+SGL G N++  V  S C WW   Y +G++NT +PTL   LD+L I GRD+TA +RIPVLDRY +RGTIA+GKVESG++R G KVTVMP    ++V  + +N D  + +A+PGE+V VKL GA +ED++KG+VLC+   PC A  +  CQ+A++D+ ++  I + G+ CV H HT EEE  +  +   E+  P+E
Sbjct:    1 MNPQASEWKPSAAAAPWT-----PGGGVAVSAPAP---APESNEDEIDENDPLWQAVLKISEGDREKALKLINNPDELAAYPEIQKILEETGGDAAEDEELVQDVEEKAKIEDSMEDE-----------AESEAPAKP---------------VKEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEREAKALNRDSWFLAFIMDTDEGERAKGKTVEVGKARFETENKRYTIMDAPGHKNHVPNMIQGASQADIGILVISARKGEFETGFDRGGQTREHALLAKTLGVDYLIVAVNKMDEPTVKWSKERFEECISKIRPYLKSCGFTIKTQVKFIPISGLGGANVKDEVPESECSWWRESYTTGQNNTDQPTLFKLLDSLVIPGRDATAPVRIPVLDRYSERGTIAMGKVESGTLRPGSKVTVMPTGQTYKVDEVWVNDDESIAAARPGESVLVKLNGARLEDIRKGYVLCS-DPPCRAVDKIICQVAIMDMPDNTKIMTAGFQCVFHAHTCEEECIITRIF--ETTNPKE 506          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|224001322|ref|XP_002290333.1| (translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335] >gi|220973755|gb|EED92085.1| translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0
Identity = 272/442 (61.54%), Postives = 338/442 (76.47%), Query Frame = 0
Query:  179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
            DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIE++E EAK+ NRESWFLAFIMDTNEEERAKG TVEVGRA FET+  RY+I+DAPGHKNYVPNMI GA QADVGILVISAR+GEFE+GF++GGQTREHALLAKTLGV YLVVVINKMD+ TVQW KERFDECV KLKPFLK CG+  KK+VKF+P+SGL G N++  V    C WW+  Y++G++NT + TL+  LD+L + GR+  A +RIPVLDRY DRGTIA+GKVESG++R G K+T+MP + +++V G+  ++ P+ SA+PGENV VKL GAG+ED+QKGFV+C+   PC +  +  CQ+ ++DL +H  + + G+  + H H AEEE TV ++     RK  +V +   FA  G  +   +  AR V  E F + P LGR TLR EGKT AIG I K+ P
Sbjct:   27 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIEKYESEAKERNRESWFLAFIMDTNEEERAKGITVEVGRATFETEAHRYSILDAPGHKNYVPNMIMGASQADVGILVISARKGEFESGFDKGGQTREHALLAKTLGVSYLVVVINKMDEPTVQWKKERFDECVQKLKPFLKGCGFTIKKEVKFMPISGLNGANVKDEVDPKECSWWKDCYKNGDNNTDKATLMDLLDSLELKGRNPDAPVRIPVLDRYSDRGTIAMGKVESGTIRPGMKITLMPTRQKYKVDGLWTDETPLASARPGENVLVKLNGAGMEDIQKGFVICS-DPPCRSVDKLICQVLVMDLPDHAKVLTAGFQAIFHAHCAEEEATVTKIFETTDRKG-KVTKGAHFANVGMRVICMIELARTVPLETFDDYPFLGRFTLRTEGKTCAIGVIKKLPP 466          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|635367393|emb|CCI44372.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 271/451 (60.09%), Postives = 341/451 (75.61%), Query Frame = 0
Query:  172 EEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLC---TAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
            EED+ DEDPREHLN+V IGHVDAGKST+SG +LYL G VDKRTIER+EKEAK  +RESWFL+FIMDT EEER KGKT+EVGRAHFET+ +RYTI+DAPGHK YVPNMI GA QAD+GILVISAR+GEFETGFERGGQTREHALLAKTLG+  LVVVINKMD+   +W++ERFDECV+KL+PFL+SCG+A K+D+ FIP+SGL G N++  V     PW+EG            +LI+ LD +HI GRD+ A LR+P+LDRY +RGT+A+GKVESG ++ G K+ +MP  T   V  + IND P+R+AKPGENV ++L   G++D+ KGFVLC   T  +   A   F  Q+ALVD LEHRP+ + GY CV+H+HT  +E  VV+LL  I+ +  +  K+   F RQG  +   +   + +C E ++ +PQLGRLTLRDEGKTIAIGK+L +
Sbjct:   85 EEDIGDEDPREHLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEEREKGKTIEVGRAHFETENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMDEA--EWAQERFDECVTKLRPFLRSCGFAVKRDLSFIPLSGLLGHNVKIRVEKEMAPWYEG-----------DSLIAHLDTMHIIGRDALAPLRVPILDRYQERGTVAMGKVESGILKSGHKILLMPTHTTVVVNQVYINDQPIRTAKPGENVTLRL-SCGLDDIHKGFVLCDHDTKEEGPKAIVSFVAQVALVDTLEHRPLLTAGYKCVLHIHTITQECCVVKLLRPIDPKTGKPCKKSVPFIRQGQSVICRIEVEQSICIETYERMPQLGRLTLRDEGKTIAIGKVLTL 521          
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|635367392|emb|CCI44371.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 271/451 (60.09%), Postives = 341/451 (75.61%), Query Frame = 0
Query:  172 EEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLC---TAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
            EED+ DEDPREHLN+V IGHVDAGKST+SG +LYL G VDKRTIER+EKEAK  +RESWFL+FIMDT EEER KGKT+EVGRAHFET+ +RYTI+DAPGHK YVPNMI GA QAD+GILVISAR+GEFETGFERGGQTREHALLAKTLG+  LVVVINKMD+   +W++ERFDECV+KL+PFL+SCG+A K+D+ FIP+SGL G N++  V     PW+EG            +LI+ LD +HI GRD+ A LR+P+LDRY +RGT+A+GKVESG ++ G K+ +MP  T   V  + IND P+R+AKPGENV ++L   G++D+ KGFVLC   T  +   A   F  Q+ALVD LEHRP+ + GY CV+H+HT  +E  VV+LL  I+ +  +  K+   F RQG  +   +   + +C E ++ +PQLGRLTLRDEGKTIAIGK+L +
Sbjct:   96 EEDIGDEDPREHLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEEREKGKTIEVGRAHFETENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMDEA--EWAQERFDECVTKLRPFLRSCGFAVKRDLSFIPLSGLLGHNVKIRVEKEMAPWYEG-----------DSLIAHLDTMHIIGRDALAPLRVPILDRYQERGTVAMGKVESGILKSGHKILLMPTHTTVVVNQVYINDQPIRTAKPGENVTLRL-SCGLDDIHKGFVLCDHDTKEEGPKAIVSFVAQVALVDTLEHRPLLTAGYKCVLHIHTITQECCVVKLLRPIDPKTGKPCKKSVPFIRQGQSVICRIEVEQSICIETYERMPQLGRLTLRDEGKTIAIGKVLTL 532          
The following BLAST results are available for this feature:
BLAST of EWM24563.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106077|gb|EWM24563.1|0.000e+0100.00elongation factor tu [Nannochloropsis gaditana][more]
gi|298711946|emb|CBJ48633.1|0.000e+059.25Sup35, eukaryotic translation termination factor e... [more]
gi|676382681|ref|XP_009034619.1|0.000e+065.17hypothetical protein AURANDRAFT_62149 [Aureococcus... [more]
gi|1210515792|dbj|GAX25315.1|0.000e+052.75peptide chain release factor subunit 3 [Fistulifer... [more]
gi|1072224718|gb|OEU09467.1|0.000e+061.76GTP_EFTU-domain-containing protein [Fragilariopsis... [more]
gi|219116514|ref|XP_002179052.1|0.000e+063.57predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210524293|dbj|GAX17022.1|0.000e+054.33hypothetical protein FisN_5Hh406 [Fistulifera sola... [more]
gi|224001322|ref|XP_002290333.1|0.000e+061.54translation elongation factor-1-alpha [Thalassiosi... [more]
gi|635367393|emb|CCI44372.1|0.000e+060.09unnamed protein product [Albugo candida][more]
gi|635367392|emb|CCI44371.1|0.000e+060.09unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6124rna6124Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications