EWM24563.1, cds6109 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|585106077|gb|EWM24563.1| (elongation factor tu [Nannochloropsis gaditana]) HSP 1 Score: 1288.09 bits (3332), Expect = 0.000e+0 Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0
Query: 1 MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN 624
MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN
Sbjct: 1 MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLPTTRN 624
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|298711946|emb|CBJ48633.1| (Sup35, eukaryotic translation termination factor eRF3 [Ectocarpus siliculosus]) HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0 Identity = 330/557 (59.25%), Postives = 409/557 (73.43%), Query Frame = 0
Query: 72 DENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEED---------VQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLK-SCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
DENDPLW+A ++A GDR K KMLEDPD+LM PE+ ++ G + + + +E P +A G G+ A GG+++ DEDPREHLNLVFIGHVDAGKST+SG +LYLT VDKRTIER+E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRAHF+T+ KRYTI+DAPGH YVPNMI GAVQADVGILVISAR+GEFETGF+RGGQTREHALLAKTLGVRYLVVVINKMDD TV+W+KERFDECV+K++PFL+ CGYA KK+VKFIP+SGL+G N+++ VA CPWW + ++G++NT+E TL+ LD LH+D R + LR+PVLDRY+DRGT+ LGKVE G++ G ++++MP +V I I D V+SAKPGENV VK+ + DV +GFVLC+ +PCHAAT F Q+ALV+L E RPIF+ GY+ + H HT EEE TVVE+LS+ RK K+R RFA++G ++TA + R +C E+F+E+P LGR TLR EGKTIAIGKIL V
Sbjct: 118 DENDPLWKATLQVANGDRAKALKMLEDPDALMANPEVNKIIAEGAASGDAAL---------EVVEGQYPEQAGGGVAAGGEGEGKAARGERRKGGDNYGGKKEEKEEVVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTECKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWAKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVANDLCPWWGPMIKAGDNNTSEGTLLELLDKLHMDDRHADRPLRVPVLDRYNDRGTMVLGKVEQGTLTEGTQISLMPTGQVSKVDSIFIKDERVKSAKPGENVTVKVVCSD-SDVMRGFVLCSTVQPCHAATLFVAQIALVELTEQRPIFTAGYDAMCHCHTCEEECTVVEILSVVDRKT-GAKKRQRFAKEGAMVTAKFKVDRSMCMESFEEMPHLGRFTLRTEGKTIAIGKILAV 663
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|676382681|ref|XP_009034619.1| (hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens] >gi|323455196|gb|EGB11065.1| hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens]) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 290/445 (65.17%), Postives = 358/445 (80.45%), Query Frame = 0
Query: 179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIND-LPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESR---KPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
DPREHLN+VFIGHVDAGKST+SG +LYLTG VDKRTIE++E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRA FET+ KRYTI+DAPGHK+YVP+MI+GA QADVGILVISARRGEFETGFERGGQTREHA+L KTLGVR+L+VVINKMDD TVQW KER+DECVSKLKPFLK+CG+ +K+VKF+P+SGL G N+ V A+ CPWW+ +G+HNT + TLI CLD L I+GR + + +RIPVLDR+++RGT+ +GKVESG + G K+T+MP K + +V+ + +N+ PV SAKPGENV K+ GA +E++ KGFVLC+A C A +F CQLALV+LLEHRPIF+ GY C++H HT E EVT +LLS + ++ KP R FA+QG V+ A L +C E F+++ QLGR TLRDEGK+IAIGKI+ +
Sbjct: 45 DPREHLNVVFIGHVDAGKSTLSGNMLYLTGFVDKRTIEKYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAPFETEVKRYTILDAPGHKSYVPHMISGAAQADVGILVISARRGEFETGFERGGQTREHAMLCKTLGVRFLLVVINKMDDPTVQWKKERYDECVSKLKPFLKTCGFIIRKEVKFMPISGLVGSNVLNQVDAAVCPWWQACVDAGDHNTTDATLIGCLDKLTIEGRSAESPVRIPVLDRFYERGTMVMGKVESGRIAKGMKLTIMPTKQEVKVEQVYVNETTPVFSAKPGENVSFKVSGAAIEEICKGFVLCSA-PVCRAVNKFTCQLALVELLEHRPIFTSGYTCMLHAHTCETEVTCSKLLSQVNAKVKPKPGAPPRPICFAKQGAVVIAQLSVPETICLEVFEDMNQLGRFTLRDEGKSIAIGKIISL 488
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1210515792|dbj|GAX25315.1| (peptide chain release factor subunit 3 [Fistulifera solaris]) HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0 Identity = 317/601 (52.75%), Postives = 413/601 (68.72%), Query Frame = 0
Query: 25 FNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAV---DKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIN-DLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPE-EVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
NP A + P AA+ T + PAP+ NA + N + DE DPLWQAV K++ GDREK K++ +PD L YPEI+ +L E+ GG A + + +D +A + ++ APA + V++ DPREHLNLVFIGHVDAGKST+SG +LYLT VDKRTIER+E+EAK LNR+SWFLAFIMDT+E ERAKGKTVEVG+A FET+ KRYTIMDAPGHKNYVPNMI GA QAD+GILVISAR+GEFETGF+RGGQTREHALLAKTLGV YL+V +NKMD+ TV+WSKERF+EC+SK++P+LKSCG+ K VKFIP+SGL G N++ V+ S C WW+ Y +G++NT +PTL LD+L I GRD+TA +RIPVLDRY +RGTIA+GKVESG++R G KVTVMP ++V + +N D + +A+PGE+V VKL GA +ED++KG+VLC+ PC A + CQ+A++D+ ++ I + G+ CV H HT EEE T+ + E+ P+ +V + RFA G + ++ + + + LGR TLR EGKTIAIGKI K+ P
Sbjct: 1 MNPQATEWKPSVAAAPWT-------PGGGVSVPAPTPNAAPEPESNEDEIDEQDPLWQAVLKISDGDREKALKLINNPDELAAYPEIQKIL--------EETGGDAAEDEESELVQDVEEKAKIEDSMEDEAESE-APA------------KPVKEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEREAKALNRDSWFLAFIMDTDEGERAKGKTVEVGKARFETENKRYTIMDAPGHKNYVPNMIQGASQADIGILVISARKGEFETGFDRGGQTREHALLAKTLGVDYLIVAVNKMDEPTVKWSKERFEECISKIRPYLKSCGFTIKTQVKFIPISGLGGANVKDEVSESECSWWKEFYTTGQNNTDQPTLFKLLDSLIIPGRDATAPVRIPVLDRYSERGTIAMGKVESGTLRPGSKVTVMPTGMTYKVDEVWVNDDESIAAARPGESVLVKLNGARLEDIRKGYVLCS-DPPCRAVDKLICQVAIMDMPDNTKIMTAGFQCVFHAHTCEEECTITRIF--ETTNPKGQVMKGARFAGIGMRAIVMIELSQSTPLDTYDNMHFLGRFTLRTEGKTIAIGKITKLPP 570
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1072224718|gb|OEU09467.1| (GTP_EFTU-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 281/455 (61.76%), Postives = 348/455 (76.48%), Query Frame = 0
Query: 172 EEDVQDE------DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
EEDV+D DPREHLNLVFIGHVDAGKST+SG +LY+ VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+AHFET+ KRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVVV+NKMDD TV WSKERFDECV KL+PFLK CGY K +VKFIPVSGL G N++ V +S C WW+ ++SGE+NT+ PTL+S D+L I GR++TA LRIP+LDRY DRGTIA+GKVESG +R G KVT+MP + +++V + N+ PV +A+PGENV +KL GAG EDV+KGFV+CT+ C + + C++ +V++ E+ I + G+ + H H EEE T++++ E+ + + RFA + A+ V E + + P LGR TLR EGKTIAIGKI K+ P
Sbjct: 2 EEDVEDVVAIKEGDPREHLNLVFIGHVDAGKSTLSGSILYILDYVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAHFETEAKRYTILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKGCGYTIKTEVKFIPVSGLVGSNVKDEVDSSICSWWKNSWESGENNTSAPTLLSLFDSLEISGRNATAPLRIPILDRYTDRGTIAMGKVESGVIRPGMKVTLMPTRAEYKVDAVWANEDPVAAARPGENVLIKLAGAGTEDVRKGFVMCTS-PACRSVAKIICEIYVVEMPENTRIMTAGFQAMFHAHCCEEECTILKIF--ETTNKGKTLKGARFAGVNMTAVCMIELAQTVPVETYDDYPFLGRFTLRSEGKTIAIGKIQKLPP 453
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|219116514|ref|XP_002179052.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409819|gb|EEC49750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 281/442 (63.57%), Postives = 341/442 (77.15%), Query Frame = 0
Query: 179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
DPREHLNLVFIGHVDAGKST+SG +LYLT VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+A FETD KRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVV +NKMD+ TVQW KERFDECV+K++PFLKSCG+ K++VKFIP+SGL+G N++ VA S C WW+ Y S E+NT+ PTL+S LD L I GRD A LRIPVLDRY DRG I++GKVESG +R G KVT+MP + +++V + N+ PV A+PGENV VKL GA +EDV+KGFV+CT PC A + CQ+A+ D+ ++ PI + G+ C+ H HT EEE TV ++ + K VK R+ G L A+ V E ++ + +GR TLR EGKT+AIGKI K+ P
Sbjct: 5 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAQFETDLKRYTILDAPGHKNYVPNMIQGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVAVNKMDEPTVQWKKERFDECVTKIRPFLKSCGFVIKREVKFIPISGLSGANVKDEVALSECSWWKEYYTSNENNTSAPTLLSLLDTLEIAGRDPEAPLRIPVLDRYTDRGIISMGKVESGIIRPGMKVTIMPTRNKYKVDEVWANEDPVSGARPGENVLVKLNGAKMEDVRKGFVICT-DPPCRAVDKIICQIAVADMPDNTPIMTAGFQCMFHAHTTEEECTVAKIFETTNAKGVVVK-GARYVGVGMRAIVMLDLAQTVPLETYEHMAFMGRFTLRTEGKTVAIGKITKLPP 444
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|1210524293|dbj|GAX17022.1| (hypothetical protein FisN_5Hh406 [Fistulifera solaris]) HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0 Identity = 295/543 (54.33%), Postives = 374/543 (68.88%), Query Frame = 0
Query: 25 FNPNARSFTPGGAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALL---GGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPAPSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITIN-DLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEE 563
NP A + P AA+ T + PAP A + N + DENDPLWQAV K++ GDREK K++ +PD L YPEI+ +L GG EE V E + +DE A +A P V++ DPREHLNLVFIGHVDAGKST+SG +LYLT VDKRTIER+E+EAK LNR+SWFLAFIMDT+E ERAKGKTVEVG+A FET+ KRYTIMDAPGHKN+VPNMI GA QAD+GILVISAR+GEFETGF+RGGQTREHALLAKTLGV YL+V +NKMD+ TV+WSKERF+EC+SK++P+LKSCG+ K VKFIP+SGL G N++ V S C WW Y +G++NT +PTL LD+L I GRD+TA +RIPVLDRY +RGTIA+GKVESG++R G KVTVMP ++V + +N D + +A+PGE+V VKL GA +ED++KG+VLC+ PC A + CQ+A++D+ ++ I + G+ CV H HT EEE + + E+ P+E
Sbjct: 1 MNPQASEWKPSAAAAPWT-----PGGGVAVSAPAP---APESNEDEIDENDPLWQAVLKISEGDREKALKLINNPDELAAYPEIQKILEETGGDAAEDEELVQDVEEKAKIEDSMEDE-----------AESEAPAKP---------------VKEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEREAKALNRDSWFLAFIMDTDEGERAKGKTVEVGKARFETENKRYTIMDAPGHKNHVPNMIQGASQADIGILVISARKGEFETGFDRGGQTREHALLAKTLGVDYLIVAVNKMDEPTVKWSKERFEECISKIRPYLKSCGFTIKTQVKFIPISGLGGANVKDEVPESECSWWRESYTTGQNNTDQPTLFKLLDSLVIPGRDATAPVRIPVLDRYSERGTIAMGKVESGTLRPGSKVTVMPTGQTYKVDEVWVNDDESIAAARPGESVLVKLNGARLEDIRKGYVLCS-DPPCRAVDKIICQVAIMDMPDNTKIMTAGFQCVFHAHTCEEECIITRIF--ETTNPKE 506
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|224001322|ref|XP_002290333.1| (translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335] >gi|220973755|gb|EED92085.1| translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0 Identity = 272/442 (61.54%), Postives = 338/442 (76.47%), Query Frame = 0
Query: 179 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
DPREHLNLVFIGHVDAGKST+SG +LYLT VDKRTIE++E EAK+ NRESWFLAFIMDTNEEERAKG TVEVGRA FET+ RY+I+DAPGHKNYVPNMI GA QADVGILVISAR+GEFE+GF++GGQTREHALLAKTLGV YLVVVINKMD+ TVQW KERFDECV KLKPFLK CG+ KK+VKF+P+SGL G N++ V C WW+ Y++G++NT + TL+ LD+L + GR+ A +RIPVLDRY DRGTIA+GKVESG++R G K+T+MP + +++V G+ ++ P+ SA+PGENV VKL GAG+ED+QKGFV+C+ PC + + CQ+ ++DL +H + + G+ + H H AEEE TV ++ RK +V + FA G + + AR V E F + P LGR TLR EGKT AIG I K+ P
Sbjct: 27 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIEKYESEAKERNRESWFLAFIMDTNEEERAKGITVEVGRATFETEAHRYSILDAPGHKNYVPNMIMGASQADVGILVISARKGEFESGFDKGGQTREHALLAKTLGVSYLVVVINKMDEPTVQWKKERFDECVQKLKPFLKGCGFTIKKEVKFMPISGLNGANVKDEVDPKECSWWKDCYKNGDNNTDKATLMDLLDSLELKGRNPDAPVRIPVLDRYSDRGTIAMGKVESGTIRPGMKITLMPTRQKYKVDGLWTDETPLASARPGENVLVKLNGAGMEDIQKGFVICS-DPPCRSVDKLICQVLVMDLPDHAKVLTAGFQAIFHAHCAEEEATVTKIFETTDRKG-KVTKGAHFANVGMRVICMIELARTVPLETFDDYPFLGRFTLRTEGKTCAIGVIKKLPP 466
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|635367393|emb|CCI44372.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0 Identity = 271/451 (60.09%), Postives = 341/451 (75.61%), Query Frame = 0
Query: 172 EEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLC---TAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
EED+ DEDPREHLN+V IGHVDAGKST+SG +LYL G VDKRTIER+EKEAK +RESWFL+FIMDT EEER KGKT+EVGRAHFET+ +RYTI+DAPGHK YVPNMI GA QAD+GILVISAR+GEFETGFERGGQTREHALLAKTLG+ LVVVINKMD+ +W++ERFDECV+KL+PFL+SCG+A K+D+ FIP+SGL G N++ V PW+EG +LI+ LD +HI GRD+ A LR+P+LDRY +RGT+A+GKVESG ++ G K+ +MP T V + IND P+R+AKPGENV ++L G++D+ KGFVLC T + A F Q+ALVD LEHRP+ + GY CV+H+HT +E VV+LL I+ + + K+ F RQG + + + +C E ++ +PQLGRLTLRDEGKTIAIGK+L +
Sbjct: 85 EEDIGDEDPREHLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEEREKGKTIEVGRAHFETENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMDEA--EWAQERFDECVTKLRPFLRSCGFAVKRDLSFIPLSGLLGHNVKIRVEKEMAPWYEG-----------DSLIAHLDTMHIIGRDALAPLRVPILDRYQERGTVAMGKVESGILKSGHKILLMPTHTTVVVNQVYINDQPIRTAKPGENVTLRL-SCGLDDIHKGFVLCDHDTKEEGPKAIVSFVAQVALVDTLEHRPLLTAGYKCVLHIHTITQECCVVKLLRPIDPKTGKPCKKSVPFIRQGQSVICRIEVEQSICIETYERMPQLGRLTLRDEGKTIAIGKVLTL 521
BLAST of EWM24563.1 vs. NCBI_GenBank
Match: gi|635367392|emb|CCI44371.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0 Identity = 271/451 (60.09%), Postives = 341/451 (75.61%), Query Frame = 0
Query: 172 EEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLC---TAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLS-IESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKV 618
EED+ DEDPREHLN+V IGHVDAGKST+SG +LYL G VDKRTIER+EKEAK +RESWFL+FIMDT EEER KGKT+EVGRAHFET+ +RYTI+DAPGHK YVPNMI GA QAD+GILVISAR+GEFETGFERGGQTREHALLAKTLG+ LVVVINKMD+ +W++ERFDECV+KL+PFL+SCG+A K+D+ FIP+SGL G N++ V PW+EG +LI+ LD +HI GRD+ A LR+P+LDRY +RGT+A+GKVESG ++ G K+ +MP T V + IND P+R+AKPGENV ++L G++D+ KGFVLC T + A F Q+ALVD LEHRP+ + GY CV+H+HT +E VV+LL I+ + + K+ F RQG + + + +C E ++ +PQLGRLTLRDEGKTIAIGK+L +
Sbjct: 96 EEDIGDEDPREHLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEEREKGKTIEVGRAHFETENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMDEA--EWAQERFDECVTKLRPFLRSCGFAVKRDLSFIPLSGLLGHNVKIRVEKEMAPWYEG-----------DSLIAHLDTMHIIGRDALAPLRVPILDRYQERGTVAMGKVESGILKSGHKILLMPTHTTVVVNQVYINDQPIRTAKPGENVTLRL-SCGLDDIHKGFVLCDHDTKEEGPKAIVSFVAQVALVDTLEHRPLLTAGYKCVLHIHTITQECCVVKLLRPIDPKTGKPCKKSVPFIRQGQSVICRIEVEQSICIETYERMPQLGRLTLRDEGKTIAIGKVLTL 532 The following BLAST results are available for this feature:
BLAST of EWM24563.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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