EWM24566.1, cds6107 (CDS) Nannochloropsis gaditana

Overview
NameEWM24566.1
Unique Namecds6107
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:623293..623683 +
Alignment locationCM002467.1:623795..624396 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24566.1
ProductPre-mRNA processing ribonucleoprotein, snoRNA-binding domain protein
Orig transcript idgnl|cribi|Naga_100140g14.4490.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:623293..623683 +
CM002467.1supercontigCM002467.1:623795..624396 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR012976NOSIC
Homology
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|585106080|gb|EWM24566.1| (Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLVVGAGEEGEKKKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKKEKK 330
            MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLVVGAGEEGEKKKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKKEKK
Sbjct:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLVVGAGEEGEKKKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKKEKK 330          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|553190388|ref|XP_005855181.1| (nucleolar protein 56 [Nannochloropsis gaditana CCMP526] >gi|422293884|gb|EKU21184.1| nucleolar protein 56 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 613.609 bits (1581), Expect = 0.000e+0
Identity = 307/330 (93.03%), Postives = 309/330 (93.64%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLVVGAGEEGEKKKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKKEKK 330
            MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNA                     KKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKK++K
Sbjct:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNA---------------------KKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKKKKKKEK 309          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|298704821|emb|CBJ48969.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 427.943 bits (1099), Expect = 2.193e-145
Identity = 219/324 (67.59%), Postives = 258/324 (79.63%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLVVGAGEEGEKKKKKKKKEKKREEEEEEEEDATSSPTKEGKKRKAEVEESAEKKKKK 324
            MIIQSI LLDQLDKDLNTFAMRVREWYCWHFPELR+LVKDNY+FARCA+YI+DRA+  EEKL GL EI  DEEL+ +IL A++ SMGMD S  DM NIV F  RMVKLAEYR+ L+AYL++KM  VAPNL  LIG+TV ARLI+KAGSLTSLAK PAST+QILGAEKALFRALKTKGNTPKYG+IYHS++IGRAAAKNKGRISR LANKC+IASRID+F++EP+T+YG++L+EQVEERL+FYDTG APRKN+ VM  V  E+   G      GE  E      +K+KK+ E +EE+EDA            A V+++   KKKK
Sbjct:  170 MIIQSICLLDQLDKDLNTFAMRVREWYCWHFPELRELVKDNYMFARCAAYIKDRAAFDEEKLPGLNEIVMDEELAAAILKASRHSMGMDASPVDMSNIVTFCERMVKLAEYRRDLYAYLVDKMGIVAPNLAALIGDTVGARLISKAGSLTSLAKCPASTVQILGAEKALFRALKTKGNTPKYGIIYHSTFIGRAAAKNKGRISRVLANKCAIASRIDSFSDEPSTKYGDELREQVEERLKFYDTGEAPRKNISVMEKVAAEIAREG------GEIAEVCTPSSQKKKKKRERKEEDEDAV-----------AAVDDAPSSKKKK 476          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|970629473|gb|KUF76720.1| (Nucleolar protein 56 [Phytophthora nicotianae])

HSP 1 Score: 428.713 bits (1101), Expect = 3.611e-145
Identity = 193/267 (72.28%), Postives = 236/267 (88.39%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGV 267
            MIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCAS+I++R+SL+E+ LE L +I  DE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+QLH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAK PAST+QILGAEKALFRALKT+GNTPKYGL++HS++IGRAAAKNKGRISRYLANKC+IASRID+F +EPTT+YG+K++EQVEERL FY++GAAPRKN DVM  V +EL++A V
Sbjct:  172 MIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLSEDSLEELAKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMQEVSEELKKAAV 438          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|675166585|ref|XP_008892177.1| (hypothetical protein PPTG_02695 [Phytophthora parasitica INRA-310] >gi|566026690|gb|ETI49601.1| hypothetical protein F443_06593 [Phytophthora parasitica P1569] >gi|567963999|gb|ETK89490.1| hypothetical protein L915_06466 [Phytophthora parasitica] >gi|567992703|gb|ETL42893.1| hypothetical protein L916_06411 [Phytophthora parasitica] >gi|568021988|gb|ETL96069.1| hypothetical protein L917_06276 [Phytophthora parasitica] >gi|568052367|gb|ETM49245.1| hypothetical protein L914_06386 [Phytophthora parasitica] >gi|568108337|gb|ETN22961.1| hypothetical protein PPTG_02695 [Phytophthora parasitica INRA-310] >gi|570330369|gb|ETO78317.1| hypothetical protein F444_06665 [Phytophthora parasitica P1976] >gi|570954119|gb|ETP19376.1| hypothetical protein F441_06602 [Phytophthora parasitica CJ01A1] >gi|570989023|gb|ETP47305.1| hypothetical protein F442_06637 [Phytophthora parasitica P10297])

HSP 1 Score: 428.713 bits (1101), Expect = 3.611e-145
Identity = 193/267 (72.28%), Postives = 236/267 (88.39%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGV 267
            MIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCAS+I++R+SL+E+ LE L +I  DE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+QLH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAK PAST+QILGAEKALFRALKT+GNTPKYGL++HS++IGRAAAKNKGRISRYLANKC+IASRID+F +EPTT+YG+K++EQVEERL FY++GAAPRKN DVM  V +EL++A V
Sbjct:  172 MIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLSEDSLEELAKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMQEVSEELKKAAV 438          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|223994639|ref|XP_002287003.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978318|gb|EED96644.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 428.713 bits (1101), Expect = 4.183e-145
Identity = 201/280 (71.79%), Postives = 238/280 (85.00%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLT------------------EEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKEL 262
            MIIQSIALLDQ+DKDLNTFAMRVREWY WHFPEL+DLVKDNY++ARCA++I+D+ SL                   E+KL GL EI  DEE++ ++++AA+TSMGMD SA DM NIV FT RMVKLAEYRKQL +YL +KM+ VAPNL  LIG+TVAARLI+KAGSLT+LAK+PAST+QILGAEKALFRALKTKGNTPKYGLIYHS++IGRA AKNKGRISRYLANKCSIA+RID+FA+EP++ YG+KL+EQVEERL+FY+TGAAPRKN+DVM  V + L
Sbjct:  180 MIIQSIALLDQMDKDLNTFAMRVREWYSWHFPELKDLVKDNYMYARCAAFIKDKKSLCAGGAAGGEEGDVENGEAQEDKLPGLIEIIGDEEVANAVVSAARTSMGMDCSAVDMVNIVNFTQRMVKLAEYRKQLASYLTDKMSVVAPNLSALIGDTVAARLISKAGSLTNLAKAPASTVQILGAEKALFRALKTKGNTPKYGLIYHSTFIGRADAKNKGRISRYLANKCSIATRIDSFADEPSSAYGQKLREQVEERLKFYETGAAPRKNIDVMEEVARHL 459          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|301114791|ref|XP_002999165.1| (nucleolar protein Nop56 [Phytophthora infestans T30-4] >gi|262111259|gb|EEY69311.1| nucleolar protein Nop56 [Phytophthora infestans T30-4])

HSP 1 Score: 424.091 bits (1089), Expect = 1.501e-143
Identity = 191/266 (71.80%), Postives = 235/266 (88.35%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAG 266
            MIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCAS+I++R+SL E+ LE L++I  DE+ +Q IL A+++SMGMD S  DM N+  FTTR+VKLAEYR+QLH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAK PAST+QILGAEKALFRALKT+GNTPKYGL++HS++IGRAAAKNKGRISRYLANKC+IASRID+F +EPTT+YG+K++EQVEERL FY++GAAPRKN DVM  V +EL++A 
Sbjct:  172 MIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLNEDSLEELSKIVLDEDKAQQILHASRSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMLEVSEELKKAA 437          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|953486076|emb|CEG50254.1| (nucleolar protein nop56 [Plasmopara halstedii])

HSP 1 Score: 421.779 bits (1083), Expect = 1.311e-142
Identity = 188/269 (69.89%), Postives = 233/269 (86.62%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKELEEAGVLV 269
            MIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCAS+I++R SL+E+ LE L +I  DE+ +Q IL A+++SMGMD S  DM NI  FT+R+V LAEYR+QLH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAK PAST+QILGAEKALFRALKT+GNTPKYGL++HS++IGRAAAKNKGRISRYLANKC+IASRID+F +EPTT+YG+K++EQVEERL FY++GA PRKN DVM  V  EL++  +++
Sbjct:  172 MIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRNSLSEDSLEELAKIVLDEDKAQQILHASRSSMGMDMSEIDMINIDNFTSRLVNLAEYRRQLHQYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLSFYESGAPPRKNADVMQEVSDELKKDALMI 440          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|1173950789|gb|OQR98733.1| (nucleolar protein Nop56 [Thraustotheca clavata])

HSP 1 Score: 419.083 bits (1076), Expect = 6.066e-142
Identity = 185/258 (71.71%), Postives = 228/258 (88.37%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLTEEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAV 258
            MIIQ+IAL+DQ+DKD+NTFAMRVREWY WHFPEL  +V DNY++ARCAS+I++R +L+EE +E L  I  DE+ +  I+ A++TSMGMD S  DM N+ AFTTR++KLAEYR+QLHAYL+ KM+ VAPNL  LIGETV ARLI+ AGSLT+LAK PAST+QILGAEKALFRALKT+GNTPKYGL++HSS+IGRAA+KNKGRISRYLANKC+IASRID+F +EPTT+YG+++KEQVEERL FY++GAAPRKN+DVM +V
Sbjct:  169 MIIQAIALIDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYIYARCASFIKNRNTLSEESVEELAAIVMDEDKANQIVHASRTSMGMDMSEIDMINVDAFTTRLIKLAEYRRQLHAYLVSKMSVVAPNLAALIGETVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSSFIGRAASKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDQMKEQVEERLAFYESGAAPRKNLDVMQSV 426          
BLAST of EWM24566.1 vs. NCBI_GenBank
Match: gi|397571429|gb|EJK47796.1| (hypothetical protein THAOC_33466 [Thalassiosira oceanica])

HSP 1 Score: 417.927 bits (1073), Expect = 1.244e-141
Identity = 203/286 (70.98%), Postives = 238/286 (83.22%), Query Frame = 0
Query:    1 MIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCASYIQDRASLT------------------------EEKLEGLTEITFDEELSQSILAAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKQLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKSPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSYIGRAAAKNKGRISRYLANKCSIASRIDTFAEEPTTRYGEKLKEQVEERLRFYDTGAAPRKNVDVMNAVRKEL 262
            MIIQSIALLDQ+DKDLNTFAMRVREWY WHFPEL+D VKDNY++ARCA++I+D+ SL                         EEKL GL EI  DEE++++++ AA+TSMGMD S+ DM NIV FT RMVKLAEYRKQL +YL +KMA VAPNL TLIG+TVAARLI+KAGSLT+LAK+PAST+QILGAEKALFRALKTKGNTPKYGLIYHSS+IGRA AKNKGRISRYLANKCSIA+RID+FA+EPT+ YG+KL++QVEERL+FY+TGAAPRKN+DVM  V + L
Sbjct:   69 MIIQSIALLDQMDKDLNTFAMRVREWYSWHFPELKDHVKDNYMYARCAAFIRDKRSLCSGGDTAENGESDNGKVNGEGVESPEEKLAGLVEIIGDEEVAKAVVVAARTSMGMDCSSMDMVNIVNFTQRMVKLAEYRKQLASYLTDKMAVVAPNLSTLIGDTVAARLISKAGSLTNLAKAPASTVQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRADAKNKGRISRYLANKCSIATRIDSFADEPTSVYGQKLRDQVEERLKFYETGAAPRKNIDVMEEVARHL 354          
The following BLAST results are available for this feature:
BLAST of EWM24566.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106080|gb|EWM24566.1|0.000e+0100.00Pre-mRNA processing ribonucleoprotein, snoRNA-bind... [more]
gi|553190388|ref|XP_005855181.1|0.000e+093.03nucleolar protein 56 [Nannochloropsis gaditana CCM... [more]
gi|298704821|emb|CBJ48969.1|2.193e-14567.59conserved unknown protein [Ectocarpus siliculosus][more]
gi|970629473|gb|KUF76720.1|3.611e-14572.28Nucleolar protein 56 [Phytophthora nicotianae][more]
gi|675166585|ref|XP_008892177.1|3.611e-14572.28hypothetical protein PPTG_02695 [Phytophthora para... [more]
gi|223994639|ref|XP_002287003.1|4.183e-14571.79predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|301114791|ref|XP_002999165.1|1.501e-14371.80nucleolar protein Nop56 [Phytophthora infestans T3... [more]
gi|953486076|emb|CEG50254.1|1.311e-14269.89nucleolar protein nop56 [Plasmopara halstedii][more]
gi|1173950789|gb|OQR98733.1|6.066e-14271.71nucleolar protein Nop56 [Thraustotheca clavata][more]
gi|397571429|gb|EJK47796.1|1.244e-14170.98hypothetical protein THAOC_33466 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6122rna6122Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications