EWM24584.1, cds6093 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|585106100|gb|EWM24584.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 370.548 bits (950), Expect = 9.817e-130 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG 183
MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG
Sbjct: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG 183
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|585106099|gb|EWM24583.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 360.147 bits (923), Expect = 5.703e-125 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0
Query: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKL 181
MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHR+ K+
Sbjct: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKI 181
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|873230410|emb|CEM11033.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 140.584 bits (353), Expect = 2.600e-38 Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 0
Query: 6 EGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGD----LKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLK--VDMVLLIDVYHHIEYVQTYMTKVREGM---RTGAELVLIDFHRVSIKL 181
E F+ HYP+G+NANF+ S E L+ KY GLF DPE RDIA+ IL+AL G +VD+G+GTGLFL A +G +G +YA E+S GF+ LL + ++EGL+N V + T+ +LP K D+V + DVYHH EY +T++ + + + TG LV+IDFHR+ K+
Sbjct: 2 ESPAVFNASHYPDGVNANFVNSTEEQLKEKYGNGSGLFEDPEQRDIAKCKDAILKALRQHCHLSPGCCLVDVGAGTGLFLKDFSAIIGNQGSIYACELSDGFLGLLERLCDEEGLTNVITVKTSDTSLQLPESAKRAADLVFICDVYHHFEYPRTFIRHIADDVIKPDTGL-LVVIDFHRIPEKI 185
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|149814202|gb|EDM73815.1| (hypothetical protein PPSIR1_34647 [Plesiocystis pacifica SIR-1]) HSP 1 Score: 114.39 bits (285), Expect = 6.762e-28 Identity = 57/134 (42.54%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 49 RDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLT 182
RD+ + I+ A+ G + D+G+GTG FL L A +GP+G +YAV+I+P F+E LR + DEGLSN +V G TT + LP VD++ + DVYHHIEY Y+ + E +R G LV+++F +V K +
Sbjct: 96 RDVFEHREAIVAAMALEPGMTVADIGAGTGAFLTTLSAPLGPEGKLYAVDIAPPFLEHLRGRVADEGLSNVEVVEGTTTETGLPPG-SVDVLFVCDVYHHIEYPSAYLRSLHETLRPGGRLVIVEFDKVPGKTS 228
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1194673464|ref|WP_086002143.1| (hypothetical protein [Plesiocystis pacifica]) HSP 1 Score: 115.161 bits (287), Expect = 8.969e-28 Identity = 57/134 (42.54%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 49 RDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLT 182
RD+ + I+ A+ G + D+G+GTG FL L A +GP+G +YAV+I+P F+E LR + DEGLSN +V G TT + LP VD++ + DVYHHIEY Y+ + E +R G LV+++F +V K +
Sbjct: 146 RDVFEHREAIVAAMALEPGMTVADIGAGTGAFLTTLSAPLGPEGKLYAVDIAPPFLEHLRGRVADEGLSNVEVVEGTTTETGLPPG-SVDVLFVCDVYHHIEYPSAYLRSLHETLRPGGRLVIVEFDKVPGKTS 278
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1180213669|ref|WP_083732515.1| (hypothetical protein [Fuerstia marisgermanicae]) HSP 1 Score: 107.842 bits (268), Expect = 1.718e-24 Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = 0
Query: 17 PEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
P+G+N +FL D + E + + E+R++ IL+A+G G I D+GSGTGL++ VG +G VYAV+ISP V+ +R++ + E L N +V + +++L D KVD V + D YHH EY ++ + + + ++ G EL+LIDF+R+
Sbjct: 179 PDGINDSFLDPDLDPSE--WVNRFEI----ESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRI 332
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1140106012|gb|APZ90569.1| (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Fuerstia marisgermanicae]) HSP 1 Score: 108.612 bits (270), Expect = 3.602e-24 Identity = 58/161 (36.02%), Postives = 94/161 (58.39%), Query Frame = 0
Query: 17 PEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
P+G+N +FL D + E + E+R++ IL+A+G G I D+GSGTGL++ VG +G VYAV+ISP V+ +R++ + E L N +V + +++L D KVD V + D YHH EY ++ + + + ++ G EL+LIDF+R+
Sbjct: 778 PDGINDSFLDPDLDPSEWVNR------FEIESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRI 931
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1085195479|gb|OGT82086.1| (hypothetical protein A3J35_05675 [Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10]) HSP 1 Score: 102.064 bits (253), Expect = 1.193e-23 Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 0
Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
E R++ DI+ A+G G+Q+ D+G+GTGLF+ L VG G VYAV+I+P F+ ++ + ++ GL+ VL + + LP + VD+V DVYHH YVQ + +R +R G + +++D+ +V
Sbjct: 40 EGREVFDYRNDIIAAIGLQPGQQVADVGAGTGLFIPLLAHKVGASGKVYAVDITPKFIAHIKNRIQERGLTQVETVLNSEHSVGLPEN-SVDIVFTCDVYHHFAYVQDMLASIRSALRPGGQFIVVDYDKV 169
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|503329398|ref|WP_013564059.1| (type 11 methyltransferase [Isosphaera pallida] >gi|319750010|gb|ADV61770.1| Methyltransferase type 11 [Isosphaera pallida ATCC 43644]) HSP 1 Score: 102.064 bits (253), Expect = 2.250e-23 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 0
Query: 5 KEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
+E T D P +N F D E A + G E+R++ + +I+ A G I D+G+GTGLF A VGP G VYAV+I+P F+E + + EG+ VLG+ + L VD+V + D YHH E + M ++ + ++ G +VL+DF R+
Sbjct: 26 QEPPATPDEPAVPPEINEAFRNPDVERYVATFEG--------ESREVFVHRREIVAACEPRPGMSIADIGAGTGLFTRLFAAEVGPTGRVYAVDIAPKFLEHIAESCRKEGIDQVETVLGDDDSPNLKPH-SVDLVFICDTYHHFEKPRAMMRRIHDALKPGGMVVLVDFKRI 189
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1200598026|gb|OUX07553.1| (SAM-dependent methyltransferase [Planctomycetaceae bacterium TMED240]) HSP 1 Score: 102.064 bits (253), Expect = 2.688e-23 Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = 0
Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
E+R++ ++ +IL+AL G ++ D+G+GTG F + AVG KG +YAVEISP F + L + L NT+ V N + LP + +D+ + DVYHH E+ + M + + + G +VLIDF R+
Sbjct: 70 ESREVYQSRREILKALAIQPGSRVADIGAGTGFFTILMSKAVGNKGWIYAVEISPKFTQHLTALFAERNLKNTTTVFCNDRSVCLPPN-SIDLAFICDVYHHFEFPKQTMLSIHDALADGGRVVLIDFERI 199 The following BLAST results are available for this feature:
BLAST of EWM24584.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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