EWM24584.1, cds6093 (CDS) Nannochloropsis gaditana

Overview
NameEWM24584.1
Unique Namecds6093
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:590783..590822 +
Alignment locationCM002467.1:590938..591449 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24584.1
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100062g26.907.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:590783..590822 +
CM002467.1supercontigCM002467.1:590938..591449 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR025714Methyltranfer_dom
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|585106100|gb|EWM24584.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 370.548 bits (950), Expect = 9.817e-130
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG 183
            MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG
Sbjct:    1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLTG 183          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|585106099|gb|EWM24583.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 360.147 bits (923), Expect = 5.703e-125
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0
Query:    1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKL 181
            MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHR+  K+
Sbjct:    1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKI 181          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|873230410|emb|CEM11033.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 140.584 bits (353), Expect = 2.600e-38
Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 0
Query:    6 EGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGD----LKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLK--VDMVLLIDVYHHIEYVQTYMTKVREGM---RTGAELVLIDFHRVSIKL 181
            E    F+  HYP+G+NANF+ S  E L+ KY    GLF DPE RDIA+    IL+AL        G  +VD+G+GTGLFL    A +G +G +YA E+S GF+ LL +  ++EGL+N   V  + T+ +LP   K   D+V + DVYHH EY +T++  + + +    TG  LV+IDFHR+  K+
Sbjct:    2 ESPAVFNASHYPDGVNANFVNSTEEQLKEKYGNGSGLFEDPEQRDIAKCKDAILKALRQHCHLSPGCCLVDVGAGTGLFLKDFSAIIGNQGSIYACELSDGFLGLLERLCDEEGLTNVITVKTSDTSLQLPESAKRAADLVFICDVYHHFEYPRTFIRHIADDVIKPDTGL-LVVIDFHRIPEKI 185          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|149814202|gb|EDM73815.1| (hypothetical protein PPSIR1_34647 [Plesiocystis pacifica SIR-1])

HSP 1 Score: 114.39 bits (285), Expect = 6.762e-28
Identity = 57/134 (42.54%), Postives = 84/134 (62.69%), Query Frame = 0
Query:   49 RDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLT 182
            RD+  +   I+ A+    G  + D+G+GTG FL  L A +GP+G +YAV+I+P F+E LR +  DEGLSN  +V G TT + LP    VD++ + DVYHHIEY   Y+  + E +R G  LV+++F +V  K +
Sbjct:   96 RDVFEHREAIVAAMALEPGMTVADIGAGTGAFLTTLSAPLGPEGKLYAVDIAPPFLEHLRGRVADEGLSNVEVVEGTTTETGLPPG-SVDVLFVCDVYHHIEYPSAYLRSLHETLRPGGRLVIVEFDKVPGKTS 228          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1194673464|ref|WP_086002143.1| (hypothetical protein [Plesiocystis pacifica])

HSP 1 Score: 115.161 bits (287), Expect = 8.969e-28
Identity = 57/134 (42.54%), Postives = 84/134 (62.69%), Query Frame = 0
Query:   49 RDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKLT 182
            RD+  +   I+ A+    G  + D+G+GTG FL  L A +GP+G +YAV+I+P F+E LR +  DEGLSN  +V G TT + LP    VD++ + DVYHHIEY   Y+  + E +R G  LV+++F +V  K +
Sbjct:  146 RDVFEHREAIVAAMALEPGMTVADIGAGTGAFLTTLSAPLGPEGKLYAVDIAPPFLEHLRGRVADEGLSNVEVVEGTTTETGLPPG-SVDVLFVCDVYHHIEYPSAYLRSLHETLRPGGRLVIVEFDKVPGKTS 278          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1180213669|ref|WP_083732515.1| (hypothetical protein [Fuerstia marisgermanicae])

HSP 1 Score: 107.842 bits (268), Expect = 1.718e-24
Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = 0
Query:   17 PEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
            P+G+N +FL  D +  E  +     +    E+R++      IL+A+G   G  I D+GSGTGL++      VG +G VYAV+ISP  V+ +R++ + E L N  +V  +  +++L  D KVD V + D YHH EY ++ +  + + ++ G EL+LIDF+R+
Sbjct:  179 PDGINDSFLDPDLDPSE--WVNRFEI----ESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRI 332          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1140106012|gb|APZ90569.1| (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Fuerstia marisgermanicae])

HSP 1 Score: 108.612 bits (270), Expect = 3.602e-24
Identity = 58/161 (36.02%), Postives = 94/161 (58.39%), Query Frame = 0
Query:   17 PEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
            P+G+N +FL  D +  E           + E+R++      IL+A+G   G  I D+GSGTGL++      VG +G VYAV+ISP  V+ +R++ + E L N  +V  +  +++L  D KVD V + D YHH EY ++ +  + + ++ G EL+LIDF+R+
Sbjct:  778 PDGINDSFLDPDLDPSEWVNR------FEIESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRI 931          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1085195479|gb|OGT82086.1| (hypothetical protein A3J35_05675 [Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10])

HSP 1 Score: 102.064 bits (253), Expect = 1.193e-23
Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 0
Query:   47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
            E R++     DI+ A+G   G+Q+ D+G+GTGLF+  L   VG  G VYAV+I+P F+  ++ + ++ GL+    VL +  +  LP +  VD+V   DVYHH  YVQ  +  +R  +R G + +++D+ +V
Sbjct:   40 EGREVFDYRNDIIAAIGLQPGQQVADVGAGTGLFIPLLAHKVGASGKVYAVDITPKFIAHIKNRIQERGLTQVETVLNSEHSVGLPEN-SVDIVFTCDVYHHFAYVQDMLASIRSALRPGGQFIVVDYDKV 169          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|503329398|ref|WP_013564059.1| (type 11 methyltransferase [Isosphaera pallida] >gi|319750010|gb|ADV61770.1| Methyltransferase type 11 [Isosphaera pallida ATCC 43644])

HSP 1 Score: 102.064 bits (253), Expect = 2.250e-23
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 0
Query:    5 KEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
            +E   T D    P  +N  F   D E   A + G        E+R++  +  +I+ A     G  I D+G+GTGLF     A VGP G VYAV+I+P F+E + +    EG+     VLG+  +  L     VD+V + D YHH E  +  M ++ + ++ G  +VL+DF R+
Sbjct:   26 QEPPATPDEPAVPPEINEAFRNPDVERYVATFEG--------ESREVFVHRREIVAACEPRPGMSIADIGAGTGLFTRLFAAEVGPTGRVYAVDIAPKFLEHIAESCRKEGIDQVETVLGDDDSPNLKPH-SVDLVFICDTYHHFEKPRAMMRRIHDALKPGGMVVLVDFKRI 189          
BLAST of EWM24584.1 vs. NCBI_GenBank
Match: gi|1200598026|gb|OUX07553.1| (SAM-dependent methyltransferase [Planctomycetaceae bacterium TMED240])

HSP 1 Score: 102.064 bits (253), Expect = 2.688e-23
Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = 0
Query:   47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRV 177
            E+R++ ++  +IL+AL    G ++ D+G+GTG F   +  AVG KG +YAVEISP F + L     +  L NT+ V  N  +  LP +  +D+  + DVYHH E+ +  M  + + +  G  +VLIDF R+
Sbjct:   70 ESREVYQSRREILKALAIQPGSRVADIGAGTGFFTILMSKAVGNKGWIYAVEISPKFTQHLTALFAERNLKNTTTVFCNDRSVCLPPN-SIDLAFICDVYHHFEFPKQTMLSIHDALADGGRVVLIDFERI 199          
The following BLAST results are available for this feature:
BLAST of EWM24584.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106100|gb|EWM24584.1|9.817e-130100.00methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|585106099|gb|EWM24583.1|5.703e-12597.79methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|873230410|emb|CEM11033.1|2.600e-3842.70unnamed protein product [Vitrella brassicaformis C... [more]
gi|149814202|gb|EDM73815.1|6.762e-2842.54hypothetical protein PPSIR1_34647 [Plesiocystis pa... [more]
gi|1194673464|ref|WP_086002143.1|8.969e-2842.54hypothetical protein [Plesiocystis pacifica][more]
gi|1180213669|ref|WP_083732515.1|1.718e-2436.02hypothetical protein [Fuerstia marisgermanicae][more]
gi|1140106012|gb|APZ90569.1|3.602e-2436.02Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
gi|1085195479|gb|OGT82086.1|1.193e-2336.64hypothetical protein A3J35_05675 [Gammaproteobacte... [more]
gi|503329398|ref|WP_013564059.1|2.250e-2332.95type 11 methyltransferase [Isosphaera pallida] >gi... [more]
gi|1200598026|gb|OUX07553.1|2.688e-2337.40SAM-dependent methyltransferase [Planctomycetaceae... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6108rna6108Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications