EWM24590.1, cds6088 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|585106106|gb|EWM24590.1| (sister chromatid cohesion protein dcc1 [Nannochloropsis gaditana]) HSP 1 Score: 883.634 bits (2282), Expect = 0.000e+0 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0 Query: 1 MAPPDVSASVTPLPRHGKRRRLVEDVAAGRTSLGPGPANAGDPVGNKEGASHAGMATFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 MAPPDVSASVTPLPRHGKRRRLVEDVAAGRTSLGPGPANAGDPVGNKEGASHAGMATFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR Sbjct: 1 MAPPDVSASVTPLPRHGKRRRLVEDVAAGRTSLGPGPANAGDPVGNKEGASHAGMATFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|299116437|emb|CBN74702.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.91 bits (385), Expect = 6.775e-38 Identity = 124/444 (27.93%), Postives = 202/444 (45.50%), Query Frame = 0 Query: 67 ESAELRLMEATPEVLDALGQGAN---LRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGN------------------------------VSFHYELKRSKPKQQLLRQLL----------------GEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQD-SQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREA---------------FFLEWEARLPGLYRPDPEVLRGIAL------KEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 ++ L L++ +L+ +G+ A+ ++++G G + A LVT TF++ + ETSN LLL PP + G GN V F +EL + P + +R +L G +L EL+TRVQ SR E+L L++++A+++DG RWR V + + D LL ++ L+ V + C+A LPD E+++++HCL+ Y SLP + +Q+ + P+A + A + + L+L KVA +AHQI + + G + F W A +PG+ P ++L+GIAL K E + + Y+P +P P RL LF ++ KW E+EPY + E FLLK+TR+S + G G +++SAR Sbjct: 43 DNQNLVLLQVPESLLNEIGEDADKGLVKLIG-GEDEDAVLVTGGQTFKLTKAETSNTLLLVPPEAATANTGVVGGNGASESSGGCTGKDDGGGGAKGEGGFEAVAAVGFQFELSKKTPSLEQIRVILEACLYRGNVEEAATDRGRLEALTLAELQTRVQFSRRELLQGLKELDAVEIDG---RWRMV-DPALMERTADALLAAVVEEDIPLDKVDSKACIAALPDCESLVLEHCLRTY----SLPSDNVEEQNGAPSETAPAA---------ADSVADQTVAPAYFRLDLAKVARLRAHQIMRAHEAEINGGGGGGSSSSSLHGSGGPISLGEFMDRWAASMPGVDTPSQDLLKGIALVETRDAKSEDKNASLVSYVPASGLPFSPAERLAALFRIKPKWPMAELEPY----ISEADRKAGFLLKNTRASTDPGT-GQKLFSAR 463
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|514688975|ref|XP_004992063.1| (hypothetical protein PTSG_06673 [Salpingoeca rosetta] >gi|326430036|gb|EGD75606.1| hypothetical protein PTSG_06673 [Salpingoeca rosetta]) HSP 1 Score: 129.028 bits (323), Expect = 6.084e-30 Identity = 108/411 (26.28%), Postives = 179/411 (43.55%), Query Frame = 0 Query: 60 LGLAKGFESAELRLMEATPEVLDALGQG---ANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPI-EKVGDI--------GTAAGNVSFHYELKRSKPK----QQLLRQLLGEG----------RVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLP--DVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIAL---KEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 L A FES++L LM+ VLDA+ QG + + G+ L T+T T+ + + SN + PP E D+ GN++ ++EL+ P Q+LLR+ G +++LD L V+ SR E+L L M+A + D WR + E + + D LL +GV ++C A L D+ +V+ LK + +T ++ +G RW L+ V F+A + Q G S W ++F W A LP P+P+ L+G+AL E+ + ++Y P ++P++P R LF+ R W +++ PY+ +V + +T E L+KH R G+ G R+Y+ + Sbjct: 5 LEFAGDFESSDLVLMQVDSHVLDAIEQGNQQVSFKACGND---SVVLCTDTRTYSVKHADVSNAHYVVPPDPEHASDVLAFPPGRPRQVRGNIASYFELRHVDPSVAKVQELLRECEYNGPEEEAARNTQTLYTLDALLDVVRASREELLTALHDMHAFEHD---DHWRVLGERYKFE-VTDLLLKTAAGDDWIADGVPLDECTASLAECDIPGFVVRAVLK-------------EMATPLDDIGA-----------------------RWRLDEAAVCRFRAQEFLQIGSS------WDLDSFTETWAASLPEGMHPNPDYLKGLALISKPSELDEKQTVQYFPASSLPVEPRARFAALFSARSVWTDDDITPYIAGIVSKLQTREALLMKHARGY--EGKDGTRMYNQK 364
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|1173943042|gb|OQR91949.1| (translation initiation factor eIF-2B subunit epsilon [Achlya hypogyna]) HSP 1 Score: 129.028 bits (323), Expect = 2.533e-28 Identity = 109/401 (27.18%), Postives = 168/401 (41.90%), Query Frame = 0 Query: 60 LGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPI----EKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEG---------------RVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTE--LMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 + A F ELR+ME +V DAL G + VVGD + A L T T ++ + R + SN+ LL + +K D + G+ HYEL L+QLL E +++LD+L R+Q S EV ++L Q+ A ++DG + + + V ILD ++ + E A A LPDV ++ HCL+ Y S + +S + L+ K+A F+A IF++ QG W AF +W R+P DP +L GIA++ L Y P + ++P R +F + KW ++ P +L E T LLK+TR+S ++YS R Sbjct: 674 IAFAADFTEDELRVMELPSDVCDALEAGEQVYVVGDATQR-AVLCTATKSYHLVREDQSNMRLLVDSVNWEADKTADTISVRGSAMSHYELVPKPLDMNQLKQLLLENPWTGAAATAPKRQKLSLYALDDLIDRLQHSPHEVSSMLAQLKAFEIDGFWRLLDSAYQRNVVGQILDVVVQNDWDFNAAHTFEAFA-----AHLPDVHPTVLSHCLRLY----------SAEDSSFQ------------------------------LDAAKIAKFQAVSIFEEA----QGKEWALNAFMEQWGFRVPMGVAIDPSLLLGIAIRR---ANDKLVYFPESQLSIEPKQRFAEMFAFQPKWLLAQLAPSLL---TEGMTQASLLLKYTRAS-RVANSPDKLYSKR 1017
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|156355264|ref|XP_001623591.1| (predicted protein [Nematostella vectensis] >gi|156210306|gb|EDO31491.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 118.627 bits (296), Expect = 3.474e-26 Identity = 106/401 (26.43%), Postives = 176/401 (43.89%), Query Frame = 0 Query: 68 SAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGD--------IGTAAGNVSFHY-ELKRSKPKQQLLRQLLGEGRV-------------------WSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVE-TVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 S E RL+E +P++L+ L QG +L + G+ E A L ++ TFE+ +TSN LLL P + D I + Y E++ +P+ Q LR+LL + ++LD+L VQGS E+ L ++ AL+++G WR + ++ E + R+LT L + V ++C L +++ + + ++CL+ YG L G +EE + L K+ F A + RP G E F W+ +P E L+GIAL + + + P +P +P R +LF R KW F+E++PY+ LV + L LLK+ RSS + G ++Y+++ Sbjct: 2 SDEYRLLELSPKLLETLEQGESLVIRGENQEE-ALLFSKDTTFEVKLADTSNTLLLTPSCQTPKDNENSSPFLISYQVSSCHSEYLEVRSGRPRLQKLRRLLEQAMYKGPEYENKGDDMTDGIREKFTLDDLLNVVQGSEQEIKQKLDKLGALEING---HWRLLEKDYEERATM-RILTYLEEMAWDYQRVPLDECCDGLKELQPSFVTEYCLRHYG----------------------KLCDGCMEEV------------HYHLLEDKICRFYAEYLL-----RPAGRFNYHE-FMESWQQSVPDGMTTTLEHLQGIALTDMKSHPPVIWHFPASDLPEEPEIRFNKLFKTRNKWTFDEIQPYIRDLVGTGQPLNSLLLKYARSS--KDDAGNKVYNSK 355
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|999982040|gb|KXJ21192.1| (Sister chromatid cohesion protein DCC1 [Exaiptasia pallida]) HSP 1 Score: 119.013 bits (297), Expect = 3.639e-26 Identity = 107/382 (28.01%), Postives = 165/382 (43.19%), Query Frame = 0 Query: 84 LGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIG-----------TAAGNVSFHYELKRSKPKQQLLRQLLGEGRV--------------WSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVE-TVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 L QG +L + GD E A L TE +T+E+ +TSN +LL P + D G S +YE++ +PK +R LL E + SL ++ VQGS E+ L ++ ALQ+DG WR + E E ++ +LT L + S + E+C +L ++E +++HCL YG ER+ EG AL++ K+ F A + RP ++ E F W+ +P E L GIAL + + Y P +P P R +LF R KW F+E++PY+ LV ++L LLK+ RSS E G ++Y+++ Sbjct: 53 LQQGESLVIRGDNQED-AVLCTEDSTYEIKLADTSNAMLLTPSCQVFKDNGFKDQKRDLVTHQICSCHSEYYEVRPCRPKLYKIRSLLQESQYKGQEYENDGNLKPKCSLQDILDVVQGSEKEIKESLCKIGALQMDGF---WRLLDVEYEEKVVIS-ILTLLEEKDWSWRNIPSEECCDVLEELEPREIIEHCLNRYG----------------ERISG---------EGQPYFALDEE----------KICRFYAEYLL-----RPTDR-FSYEEFMESWQQSVPDGMTTKEEHLAGIALVDMKSHPPVVIYFPHYNLPEKPETRFIKLFRTRSKWTFDEIQPYIKDLVESGQSLNALLLKYARSS--KDESGRKVYNSK 386
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|1191076427|ref|XP_020917143.1| (sister chromatid cohesion protein DCC1-like [Exaiptasia pallida]) HSP 1 Score: 119.013 bits (297), Expect = 4.523e-26 Identity = 107/382 (28.01%), Postives = 165/382 (43.19%), Query Frame = 0 Query: 84 LGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIG-----------TAAGNVSFHYELKRSKPKQQLLRQLLGEGRV--------------WSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVE-TVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 L QG +L + GD E A L TE +T+E+ +TSN +LL P + D G S +YE++ +PK +R LL E + SL ++ VQGS E+ L ++ ALQ+DG WR + E E ++ +LT L + S + E+C +L ++E +++HCL YG ER+ EG AL++ K+ F A + RP ++ E F W+ +P E L GIAL + + Y P +P P R +LF R KW F+E++PY+ LV ++L LLK+ RSS E G ++Y+++ Sbjct: 55 LQQGESLVIRGDNQED-AVLCTEDSTYEIKLADTSNAMLLTPSCQVFKDNGFKDQKRDLVTHQICSCHSEYYEVRPCRPKLYKIRSLLQESQYKGQEYENDGNLKPKCSLQDILDVVQGSEKEIKESLCKIGALQMDGF---WRLLDVEYEEKVVIS-ILTLLEEKDWSWRNIPSEECCDVLEELEPREIIEHCLNRYG----------------ERISG---------EGQPYFALDEE----------KICRFYAEYLL-----RPTDR-FSYEEFMESWQQSVPDGMTTKEEHLAGIALVDMKSHPPVVIYFPHYNLPEKPETRFIKLFRTRSKWTFDEIQPYIKDLVESGQSLNALLLKYARSS--KDESGRKVYNSK 388
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|66824705|ref|XP_645707.1| (hypothetical protein DDB_G0271400 [Dictyostelium discoideum AX4] >gi|74858078|sp|Q55BA5.1|DCC1_DICDI RecName: Full=Probable sister chromatid cohesion protein DCC1 >gi|60473891|gb|EAL71830.1| hypothetical protein DDB_G0271400 [Dictyostelium discoideum AX4]) HSP 1 Score: 112.849 bits (281), Expect = 5.135e-24 Identity = 90/382 (23.56%), Postives = 163/382 (42.67%), Query Frame = 0 Query: 60 LGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRV--------------WSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIAL----KEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTR 423 + + + + R +EA E+LD + L + G L A L T+ TF + TSN +LL D + +H EL +PK +L+ LL + +S DE+ R+Q S E+ L ++N L R+ +SE E IL+ +L+E L+ + + C+ + E +++HCL+ Y Q+S + G + G ++ + E +L+ KV F+A Q+ ++ + E F W+ LP +P+ +L+GIA+ E ++++ +P P R K LF + +W +++EP++ +P +LE F+L ++R Sbjct: 12 ITFSSDYPDTDYRFLEANQEILDQIKNNKKLVIKG-SLTDEAVLCTDDKTFTIRAGHTSNSMLLVS-----KDTNKIKVALQYHLELTEIQPKLNVLKDLLYSKAIDNSLDFEDDENLLGFSFDEIIDRIQSSEKEIQQYLLKLNTL---IYKNRYIVLSENYEFK-ILELILSEATIGAWKLDNIPIDKCIENIRAPE-FIIKHCLQLYS---------KQKSPTNSGGGGEEIKGGGGDDNNDENIC--------SLDFNKVCIFRAKQL----LTLSNKSNMKFEDFMDNWKDTLPIEIQPNFSMLKGIAILIPSSSTNPKEKSVKFINESILPTIPKARFKELFQISTRWSIDDIEPFIKSTIPPGNSLEQFILTYSR 361
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|813156188|ref|XP_012201443.1| (hypothetical protein SPRG_07272 [Saprolegnia parasitica CBS 223.65] >gi|641534028|gb|KDO27994.1| hypothetical protein SPRG_07272 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.538 bits (275), Expect = 2.654e-23 Identity = 108/405 (26.67%), Postives = 173/405 (42.72%), Query Frame = 0 Query: 60 LGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSF------HYELKR-----------------SKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAV--SEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439 + A F +L+E +V DAL G + VVGD + A L T T ++ + R + SN+ LL ++ D A+G VS HYEL P ++ R + +++L +L R+Q S EV +L Q+ A+++DG WR + S + V ++ + E S ++ + V L V + ++ HCL+ Y SV+ G + L+ K+A F+A IF++ S+ WT AF +W R+P D +L G+A++ GE L Y P + ++P R + +F + KW +MEPY+ PLV + T LLK+TR+S R+YS R Sbjct: 5 IAFAADFTDDGYKLLELPADVCDALVAGDEVYVVGDPSQR-AVLCTATKSYHLVREDQSNVRLLADSVDWEADKLDASGVVSVRGQSMTHYELVEKPLDLNQLKLLLIENPICAPSAEVKRM---KRSLYTLHDLADRLQHSPHEVELMLAQLRAVEIDG---YWRLLEASYSRHVVGLVLEIFLERDWDFNSEHALSHIE-VHLTETVHSSVLAHCLRMY---------------SVD-------------------------GSAFRLDSAKIAIFQAIAIFEEARSKE----WTLAAFMEQWGFRVPMGVAIDAALLVGLAIRR---GEK-LAYFPADQLSVEPKQRFQEMFAFQPKWLLSQMEPYLAPLVTKNMTQASLLLKYTRAS-RVPNSTERLYSKR 352
BLAST of EWM24590.1 vs. NCBI_GenBank
Match: gi|857977584|emb|CEO96620.1| (hypothetical protein PBRA_005229 [Plasmodiophora brassicae]) HSP 1 Score: 109.383 bits (272), Expect = 6.894e-23 Identity = 100/387 (25.84%), Postives = 172/387 (44.44%), Query Frame = 0 Query: 55 MATFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRV----------------WSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLP-DVETVLVQHCLKAYGDPHSLPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRS 424 M+ P+ +GF+ ++L+E ++ DAL + V+ L+ +VT+ T+ + VETSN +LL P +G + + HYE+ + P +R LL E + DEL VQ S A++ L M+A+++ G RW ++S E V+ L +L ++ G L+ + ++ V L D +L++H ++ + VG + L+E +A+ + R L KV EAF W+ PGL P+ ++LRG+AL +E + Y+P ++P DP R + LF++++KW +E++ Y+ LV LE +LKHTR+ Sbjct: 1 MSAVPIVFEEGFQRDAVKLIELPGDLADALEAESRPLVMRGSLDDNVVIVTDRKTYAVNLVETSNTVLLVRPSADAHTLGVHSV-LGCHYEMIETVPDLARVRSLLREHEIGVNDLPLFFDDMDGAGLRFDELADCVQASDAQIETALDLMDAIEIRG---RWFSLSVEL-VNRALSNVLDVALSCGFQLDRLPVDEVVHELQGDFPELLIKHIVRVFS------------------VGKNYDRDAKLDE----SAVCRQVAIRILLEEPKVPF---------------------EAFMTRWQLEAPGLMTPETDMLRGVALIDESVRSRTVMYVPIESLPSDPAKRFEALFSLKQKWAYEDLVAYLSDLVAFGHPLEPLILKHTRA 339 The following BLAST results are available for this feature:
BLAST of EWM24590.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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